Os03g0116700

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0116700| Description = Cyclin-like F-box domain containing protein| Version = NM_001055297.1 GI:115450322 GeneID:4331405| Length = 2258 bp|...")
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Gene Name

Os03g0116700

Description

Cyclin-like F-box domain containing protein

Version

NM_001055297.1 GI:115450322 GeneID:4331405

Length

2258 bp

Definition

Oryza sativa Japonica Group Os03g0116700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:921083..923340

Sequence Coding Region

921512..921856,922324..922442,922613..923042

Expression

GEO Profiles:Os03g0116700

Genome Context

<gbrowseImage1> name=NC_008396:921083..923340 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:921083..923340 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgcgggcgtgtcagacctcgcggcggggatggaggccgtcggcaaggtcgcgggcggcgccgggctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggagatatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtgtgggaagcgaagctgccggagaattacgggtatctcctggacttcgtcgatggcgccatggagggcggaggaggaggaagagagaggagcgtgatggggaagaaggaagtctacgcgaggctcgccaaggctgtgccatttgacggtggcaagaaggaattatggttggagaagagcaaaggcggtgtttgcatagccttgtcgtcgaaatcactggtgataacgggaattgatgacaggagatactggtctcacatgccaaccacggaatctaggttccattcggttgcatacctgcagcagatatggtggtttgaggtggttggagagctcgaattctgcttcccggcagggacctacagcctctacttcaggctccatcttgggaaggcatccacacgtttcggtcgccgcgtctgcagctcggagcagatccatggctgggacaagaagcctgtgcgcttccagctctcaacgtcagacggccagcacgccttgtcccagtgctacctggacgagccaggaagctggattctttaccatgttggtgatttcgtcgcatcgacgactgaacaacccatcaagctcaagttctccctggcacagatcgactgcacccatacgaaaggtggtctctgcgtcgattcagtgctgatttatcccaaaggatttcagcaagagaaggtgattagttctcagaagtga</cdnaseq>

Protein Sequence

<aaseq>MGAGVSDLAAGMEAVGKVAGGAGLGELPELCAAEVLLHLDAPEI CRLARLNRAFRGAAAADFVWEAKLPENYGYLLDFVDGAMEGGGGGRERSVMGKKEVYA RLAKAVPFDGGKKELWLEKSKGGVCIALSSKSLVITGIDDRRYWSHMPTTESRFHSVA YLQQIWWFEVVGELEFCFPAGTYSLYFRLHLGKASTRFGRRVCSSEQIHGWDKKPVRF QLSTSDGQHALSQCYLDEPGSWILYHVGDFVASTTEQPIKLKFSLAQIDCTHTKGGLC VDSVLIYPKGFQQEKVISSQK</aaseq>

Gene Sequence

<dnaseqindica>430..774#1242..1360#1531..1960#accttcccctccccttgctttctccatctccggagatcggagctcgcgtttttacctcacgaatagcgcgagctcgcacaaattctattccgcgacgcgatagtcttgcactcttgccccgcgctgagtccttggcatctgatgctttatctctccaaaagttgcagcttaaagcatagcaagtgcggttattgggaggcttttgttgcaagaactggatttttcccgccggttattcgaatcgggaacgctggaatcactgacacctattcgtcgtgaggattgattccgcgagaactcgattcgggatcgagttctttggaagctggttccccattgctgcgccgtgcgcgcgtggaatccaataataggcgcggcttctgtgctcgtagataagctgcggcgaccggaggcggcgagagggagcatatgggcgcgggcgtgtcagacctcgcggcggggatggaggccgtcggcaaggtcgcgggcggcgccgggctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggagatatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtgtgggaagcgaagctgccggagaattacgggtatctcctggacttcgtcgatggcgccatggagggcggaggaggaggaagagagaggagcgtgatggggaagaaggaagtctacgcgaggctcgccaaggctgtgccatttgacggtggcaagaaggtgacatttttttcttgtagagtattttgttctactacgatggttcaagttttgattttgagttcaggagtttgaagagcgagggttccgagatggtcggagtttttcttttttaaaaaatgaaaatcaaacgtgtttctcatgttctgagattctgaagaaaattttggtagtgttttgacccatgcttctctttgtgtttggtatttctcgagggattttttttttgggttagaactgtgtttacatgttcttacgtaaaggatgggatttgattccacagtagctttccatatagtatttgcttttgcaattttgcgtttaagtgtttgatttatagtatggtctaaggatggaatttgatttttcatgtgtgcaaatggtagcaaactgaatacaacttttttttttcattgataattttctatggacaaatttcccaactgtgtttctgctctgtgcttcaggaattatggttggagaagagcaaaggcggtgtttgcatagccttgtcgtcgaaatcactggtgataacgggaattgatgacaggagatactggtctcacatgccaaccacggaatctaggtactaacaactaacggtgattttttttttcatctttctcccaagtcttacatctgtttaaattagttcttcaatggcagccacaccttctacttgttgcaaatgatcaaatttcgattttcaatatatgatcaagtacacaaatctgagccatttgcttcttgatgcaggttccattcggttgcatacctgcagcagatatggtggtttgaggtggttggagagctcgaattctgcttcccggcagggacctacagcctctacttcaggctccatcttgggaaggcatccacacgtttcggtcgccgcgtctgcagctcggagcagatccatggctgggacaagaagcctgtgcgcttccagctctcaacgtcagacggccagcacgccttgtcccagtgctacctggacgagccaggaagctggattctttaccatgttggtgatttcgtcgcatcgacgactgaacaacccatcaagctcaagttctccctggcacagatcgactgcacccatacgaaaggtggtctctgcgtcgattcagtgctgatttatcccaaaggatttcagcaagagaaggtgattagttctcagaagtgaaagtgagtttgtgcactcgaccaaagttgctctacattagaggattagagctgtagatagtgtagtgtagacaatagcctaccgtttttaacttgggcttattgtatgcaatggaagaatggagtgaattttttttgtgcggcggcgtgatgagtgagctttgttgctctttctcacagtggtggccatggtgctgaggggaatgtcttgagctcacttaccttcagtcacggctccaaagtgcttgtactgatgtaagcatacgagcatagttttcaggttttgctttttttgcatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0116700, RefSeq:Os03g0116700