Os09g0255266

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0255266| Description = Glycoside hydrolase, family 32 protein| Version = NM_001188807.1 GI:297726744 GeneID:9268563| Length = 7742 bp| Def...")
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Gene Name

Os09g0255266

Description

Glycoside hydrolase, family 32 protein

Version

NM_001188807.1 GI:297726744 GeneID:9268563

Length

7742 bp

Definition

Oryza sativa Japonica Group Os09g0255266, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:4756598..4764339

Sequence Coding Region

4756598..4756757,4756916..4756924,4762970..4763724,4763841..4764020,4764091..4764339

Expression

GEO Profiles:Os09g0255266

Genome Context

<gbrowseImage1> name=NC_008402:4756598..4764339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:4756598..4764339 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagattaggtcttgccgtgtgcgccgtctccttccacctctgccttcttctgtcgtcgacctcctcgctccggctaaaccccacgacggaggacacagccaaccatggcagaagaactgcttatcacttccagcctgcaaagaactggcagaatgatccgaatgggcctttgtaccataacggtatgtaccatttgttctacaagtacaacccgcatagcgcgctctgggacatcggcaacctctcctggggccactttgtctccggcgacctcctcaactgggccgctctcgacaccgcgctcgaccccacctcgccttttgacgccaatggctgctggtcgggctccgccaccatcctccccggcggcctcccggccatcctctacaccggcattgacgccggcaaggagcaggtgcagaacgtcgccttcgccaagaacccctccgatccgctcctccgtgagtgggagaagcccgcgtacaatccggtcatcgcgctcccgcccgacgtccccggcgacaacttccgcgacccctcgacggcgtggctcgggcgcgatggcctgtggcggatcgccgtctccgccgaggtggacggcgtggcgtccacgctcgtctacaggagcgaggacttcgtccggtgggagcggaacgccgcgccgctgcacgcgtcgcgcgccgccggcatggtggagtgcccggacatgttccccgtggcggagaacggcgaggatggcctcgacacgtcgacgaacggcgccggcggcgtgcgccacgtcctgaagctgagcgtgatggacacgctccaggactactacatggtcggcacgtacgacgacgcggcggacgccttctcgccggcggagcccgagcgcggcgacgactgccggagatggcggcggctggactacggccacacgttcccgaggaagatgtggatcgccaaggacggcaagcagctgctgcagtggccaatcgaggagatcgagacgctgaggaggaagcgcgccgccggtctccggcgaggcaccaggctaggcgccggcgcggtgcaggagatcgtcggcgtggcgagctcgcaggcggacgtggaggtgattgaccattcggtggtggagagcttcggcggcggcgggcgggcgtgcatcacggcgcgggtttacccggagcacgtggcgacgagcagcagccatttgtacgtgttcaacaacgggagcgacgacgttaaggtggccaagctggaggcgtgggacctggcgacggcgaccgtcaacgttgttgttggagaccaccacggccttgctgcgccggcgttggagttggagccgacacgtacgacgcagtga</cdnaseq>

Protein Sequence

<aaseq>MARLGLAVCAVSFHLCLLLSSTSSLRLNPTTEDTANHGRRTAYH FQPAKNWQNDPNGPLYHNGMYHLFYKYNPHSALWDIGNLSWGHFVSGDLLNWAALDTA LDPTSPFDANGCWSGSATILPGGLPAILYTGIDAGKEQVQNVAFAKNPSDPLLREWEK PAYNPVIALPPDVPGDNFRDPSTAWLGRDGLWRIAVSAEVDGVASTLVYRSEDFVRWE RNAAPLHASRAAGMVECPDMFPVAENGEDGLDTSTNGAGGVRHVLKLSVMDTLQDYYM VGTYDDAADAFSPAEPERGDDCRRWRRLDYGHTFPRKMWIAKDGKQLLQWPIEEIETL RRKRAAGLRRGTRLGAGAVQEIVGVASSQADVEVIDHSVVESFGGGGRACITARVYPE HVATSSSHLYVFNNGSDDVKVAKLEAWDLATATVNVVVGDHHGLAAPALELEPTRTTQ </aaseq>

Gene Sequence

<dnaseqindica>1..160#319..327#6373..7127#7244..7423#7494..7742#atggcgagattaggtcttgccgtgtgcgccgtctccttccacctctgccttcttctgtcgtcgacctcctcgctccggctaaaccccacgacggaggacacagccaaccatggcagaagaactgcttatcacttccagcctgcaaagaactggcagaatggtaatcaaggactaatctttttgattaatcgcttgatccagttacggattcctgctgattagccaaactaatcccttttcctgtctgatcggtgccgaattcctgctgatttggatgcattggatttacgatggccgctgctgatgccgatcgagcagatccgaatggtacgctctctgcaattctgcatctcttcttgttcccctcccttctctgattacttgtagtctctgcttaattcttctgtaaaagaattgcataaattacatgctttcttggttacggatctccagtagtgaacactcaacattgaattgcaaaaactgtaaaagatgatccttatgagcttatcctgttaagcatatagcattgtatctctcgtatatagcatgctattgtatatttcctttggccgttccttcctaatccctcccgggtgtgtttctataaaccggtagagctggatatggaaggttctgcgcctacttgtactccgtgctatgcatcaatggaatacacgttgagtctatcaatccaccatggcgcccagcagcccgggccttctttcttcctcctcagtggctctcggctgaggcgcggcggcgccgaaccttctctctcctcccctccaaaaaatcgaaaaaatctccactaaatcatcacaatttggaggggaaattgttggaggacatagtggcaaggtattctcctccgaatctctcgtcatttcgcattttttttgcttggattgctcattgatggatgaaccctagaatcgtgatttggggttattttccctaattagttggttctctactctgtggttgtagttgttgttggtgatgcaatgcttagatgttcatagaaccctaatttttagtggagatttttggcacttagggaagaaccctaatttttcccccaaattagtgaagaacacttcttttttttttaattttcatcacaatgcgagagttcaaatttaggatggatcgttacaaatggaagtttgtgtatgtttagatatttatggacaatttcgttgggggacatagttgtaggttagatttctttttattgcaaattcaagtttttaaaaaatgcaatatgctaatatgtcggttaatgttgtagatggatagattagtacgattgcactatggtggttcggtggtagagcaaagtaacagtggtagcaatttcgaggggatgagtgttaagcaacttatatttggtggaaaacctagttttgaggagttagtttgtcatacaaaggatgtgctggggtggagcaatcagtctatagctatacaaggtagatatgatgttggagcaggacccatttcacacaagtacatgctagatttgaatggggagttggagtggaacacatatgtggatatagtgttgggctcccaattcaagtcgcttgaggtggttgcttcgaagcttgatcgtactgactgcagagataattcttttgacctcaatcgcacactgttttatgatgaaccaaactatgaagcatttgatgatgaaggagctatgaaaagtcagtcggttaagtctttgacagttgaggaagtcatagaatctcaagggatgggggtggatgttaacatgcaaaagaaggaagcagttgatgcgaatgagggaaggagtcaggaatctgaaagggtggagataaatgtggagttgcagaaggaggaagcagttgaggctaataaggcaagcaggcttgaatcagaaggcgtggaggtaaatgtggaattgcagaaggaggaagcaatagaggtgaatgaggcaaggagtcaggcagttccgatagttggaaatcatgttgatgatgataatgaattggcagatggatcaatgggggcaggtggagaagagcgtacaacggatgctcaattagcatccatggtgcggttctattttcaagacaaaatatatactcggagggagtgtgaggagactttgttgatgaatggattgagtgttgatttgctgcacaaacattcagaggagtatgatgacacacatgaggaggagggatatgaggttgagtatgccgtagacttagatgacgatcgtccagtagccaagatgtcttaggaagaaagggaggtgtttgagaaattagttggacgcaatccagaggttgttcagttcgaggatgttagcaattctaagctagcagttgttgatggaggagtaacatacaatggcatcatcgatgcaatgggtgaggagccaaagaaggatgagcacatagggatcgacatcaacgccatgtgctacataccggaggatatgaagtttctcaggtgccccttgatttgcttctacgccgttgagtggcagctcatccatcgcgtgctaaggcagttcggcttgcgtcaacccataccaaaaccattcccgacggggctcgacctccacaagtaagatttgcattgtgcatatcattttcaaactttctcttcggcattggctactcaagttctaaccaaattatttgttttgttgaatgactgtaggttggacaacaagaagaacaagaagattacggactggcatgctcatcatctccatcttattgagcggtgggacaacacagcagctaacgtagtgcctcacggagtggagcacaacaagacatacttcgacgagtacctagcttggctcctaaggaactaccgccttttcctttggccggcatggactctagctgacatagctacagatcccgaggatgttgaggagatgaacgagtatgacacccacacttgagcaggggcgacggtcgagtatgggcctgtacgtgaccgagtggtaagtattaaggctcagagttgttcatttcacatacacctacatgttctcacaatattaaatccacttgcaggcacgtgagctgatgaggtccgtgaacgacgcgggtgttgcccttggcacacctgctgggtcagagaatgaagttgggatacttcggagcgcacttcaggtaattaaccaattagttcaatccatgaatcatttcacttgcctctaactaatttgttttgttcttgcagaggctaaaacaacgaagttggatgttagcggcaagacttggttgtaggtccacagacgcagtcgacccacaaccaagactaacacggacacaggccggagaaacaagtcaacaaagagctaaagaggaaggggaggaagaacatgatgaaggggaggaagaacatgaggaaggggaagaaggagatggacagagtgacgaagaggaagaggaacaacccgaagaaatcgggtcatctcagcttgcaggtgccccgcagccatcgcaaccttcccagggtcgcccgcagagaaagagggtaccggtggaccggtacacaccttccactagtggccggaggggtcggcactagtggattactttgtacttaacactctaggcagcgttagacttatatcaaactctagatgatggttgatggatgtgttgaactctatattttctgatggttgatggatgtgatgaactctaaatactgtgatggttgatggatgttcagttgctgtgatgtgttaaatactatgtggctgtcaattttgtgatgctaaatacttgtgtgatgctgtcaatttctgtgtggctggctgcgctttgccagctactgcttgacctcagcgccaaatagaatggcgctgagattgtacaccgaaggaaacggccgtcacgcactcagcgccgatgcggtcggcgctgagatgttcaacctcagcgccatcggccctggcgctgaggtcggggtccagatctggtgatagtttttgccagggaccaaatttgcaaatagttttcaaaaagggccaaattgtcaaattttcgggaattcttgtgtggctagcaattgtagggtagattggtatgacaagtgtacttgctagttggcatgcttttgattggacttgtgcgtacttgcactaattggccttgaactgaaaaagaacatcttgatcgaatttagtccacagaataattctagttcccaatttcaagcctgccagttgagaaaattgttcagttcaagttctgtgggtttctgtcagaccacaattttgcttccttgcagtaacattctgcattttgattagcaaggcaggatctatttaacagaattacatctcttacataatcgaaatatttccagccgacattttctgtaattttaaacctgtacgagaaaatactttcactcaaatatttccatctatttctaatttagtttgaaatatttgctgagatggacgaaaaatttgcatatctctctaatttcatcctgctctgaattcttcaataaaaaaagaaaccttgctaaccattgggttaatttggtactctcgccgtttgagaatataagatattttggttttaacctaagtcaaactttcgaagttccaccaagtttataggtaaaatagcaacatgtctcgcatgaccaatgatattataaaagtataatccatttttgtatttaatgaaattaatttggtgccgtatatgatgtttcatttttctataaacttgatcaaatttaaaagcaatttaagttaggataaatagagaacatttcgtatgtgcccatcagttttcgctgaattctttctatgttgaattttagttttatcctctacgtgcacatgagtttttattttgatccccactatacccatgccgttagttgaatgtaacttgaccgttaaatttttcaaaaattgactatattgcccttcttatacctactttaaaaacataaatcccaatgtgaaagaaatctataataaaataaaaaaggaacaaaattatatgacaccggatttaaaaacataaatctcaatgttataaacaaaatttaaaatttcagaaaattattttaaaaaggatgaaatccatataaagggttcagtaggaaattgaaaaaccaaaactttctcttatttgggattaattttgagttaaaattttgaaaaaaaaaccctcatcaattctggtatgtaacttcttgaaaatatttaaattttagttttcaaatttatgatccagtaattatgtacgatttgtttttataaatgaatcaacttttacattggaggccaccttttttaaatcaactagcacacgctccaagtaagagaaaagagtaatgttttactcttttaaactttccttgtagcggtggcgatgagtcttcctcaccgccatcacctattgatacttggaccccacaaagtgagccccacatagctagttttttttataaaatctaatggtcagctaatcgttaactcacggaatggcctttgagggatcaaatttgaaacttagggtatgtaggagatgaggcaaaatttagaagcgcgaagggataggcaaaaatttatgagtacacaagagacttaaaactgtcgacattttggaactttgactatggtataacttataatgtaactaacctacaactacattgtgaattttatataacttgtttgtaagttttatataatttgtattacactataactataattatagtttagttaaaatatagtaatactctctatattttaattttaaaatataatgtgtattttgttttgttagaaaaaactttaaccaataattattttattagaatatcatttatgtgacaaaaatttaaaatgataatcaagtacttttgaatatggaggtaataaatttaatttcgtgccatcaaaattatatcatagtagagtttttaaagccttgtctgaacaaaacaaaaaaataccgtgtattttgaaatggtgagagtatatttgaaaaaagaacttagaacaaatttgtggcagtttttttaacaattttattaaataaaaagggagtcctccgggttaataatacttgtcgttttggacaagagcacagtcttaaaaaacaactttaaccactattttctattataatatactatatagaagtgttaacaaatatatgattttattgaaggatttttttaatactaatctatacatataatcatcatatttcgaagataaatattttaaaaattatccataataaaaataaaatttaactatatctttatctaaaacgacaagcattgtaggaagctctatgttgacagttattcattttatacgtgcagggcctttgtaccataacggtatgtaccatttgttctacaagtacaacccgcatagcgcgctctgggacatcggcaacctctcctggggccactttgtctccggcgacctcctcaactgggccgctctcgacaccgcgctcgaccccacctcgccttttgacgccaatggctgctggtcgggctccgccaccatcctccccggcggcctcccggccatcctctacaccggcattgacgccggcaaggagcaggtgcagaacgtcgccttcgccaagaacccctccgatccgctcctccgtgagtgggagaagcccgcgtacaatccggtcatcgcgctcccgcccgacgtccccggcgacaacttccgcgacccctcgacggcgtggctcgggcgcgatggcctgtggcggatcgccgtctccgccgaggtggacggcgtggcgtccacgctcgtctacaggagcgaggacttcgtccggtgggagcggaacgccgcgccgctgcacgcgtcgcgcgccgccggcatggtggagtgcccggacatgttccccgtggcggagaacggcgaggatggcctcgacacgtcgacgaacggcgccggcggcgtgcgccacgtcctgaagctgagcgtgatggacacgctccaggactactacatggtcggcacgtacgacgacgcggcggacgccttctcgccggcggagcccgagcgcggcgacgactgccggagatggcggcggctggactacggccacgtgtacgcgtccaagtcgttcttcgacgcgcgcaagaccggcacgttctgtgggcgtgggcgaacgagtccgacagccaggccgacgacgtcgcccgcggctggtccggcgtgcagacgttcccgaggaagatgtggatcgccaaggacggcaagcagctgctgcagtggccaatcgaggagatcgagacgctgaggaggaagcgcgccgccggtctccggcgaggcaccaggctaggcgccggcgcggtgcaggagatcgtcggcgtggcgagctcgcaggcggacgtggaggtggtgttcaagattccgagtctggaggaggccgaaaggctggacgaccttggtgtttttttttttttgacagattgaccattcggtggtggagagcttcggcggcggcgggcgggcgtgcatcacggcgcgggtttacccggagcacgtggcgacgagcagcagccatttgtacgtgttcaacaacgggagcgacgacgttaaggtggccaagctggaggcgtgggacctggcgacggcgaccgtcaacgttgttgttggagaccaccacggccttgctgcgccggcgttggagttggagccgacacgtacgacgcagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0255266, RefSeq:Os09g0255266