Os03g0116800

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0116800| Description = Conserved hypothetical protein| Version = NM_001055298.1 GI:115450324 GeneID:4331406| Length = 2950 bp| Definition ...")
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Gene Name

Os03g0116800

Description

Conserved hypothetical protein

Version

NM_001055298.1 GI:115450324 GeneID:4331406

Length

2950 bp

Definition

Oryza sativa Japonica Group Os03g0116800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:924379..927328

Sequence Coding Region

924499..924652,924739..925158,925271..925449,926232..926350,926844..927162

Expression

GEO Profiles:Os03g0116800

Genome Context

<gbrowseImage1> name=NC_008396:924379..927328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:924379..927328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgcccgtggagatggaggtggacgacccccgcggctgggacttcgtcgactgggtcggccccgacgcctccgcctccatcttccgctccctcgacgaccccgccgacatcgtccgcgccgccgccgtctcccgctcctggcgccgattcgttgttgagaacgaattcagcaagagcatatgcttgcggatatgcccggagatcgccaatttcaccagcgcggaggaggtgagcagatcgccgccgcagccgccgcacgccgagtccagccatggcgtccagcgcaaggccctcgagagggactacaggatctactcctacctcagcggcgccctcgtctccaacagcccctccatggactgcatcctgcaatgcatcggcgcctccagcaccgacaacttccccgacgagaccatcgagaacacgctcataccacacgatcgggtcaagcaccgcccctcctactggtccagcggcggccacgacgatcccgacacaccagagaccttgacgtacaggctcaactgtgatatgtgcatcgtcgatgagatcaagctgcagccattcaaagcttattttcagtatggacatcctatatactcttcaaaggcagtcagattccggatgggccattccaagcttcctcatggctcggattcctttgttacggtcgaggatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagagttccccatgttgcaggaaaatgtgctacaatccttcaagcttccgcgcccagtcctttgcattggtggtatagtgaaggttgaactattgggcagagtacaaaaacaggaagcagatgataggtactacatatgtatctgccatgctcaagtgagagggcgttcactttctccagttttcatggttgatacctctgatcctgctggttattcagtcctcaagtacttgccggatgcaaaaatcctacgctccgaggacgcaatgctggacgatggcagcgaatcgctggagtggcactcacttgttgctaggtacaggcggatgaggcatctagcgataatgaatgtgcttcttggacctgaagagttcatggatgaagatgatattataggtggcgtgttaatggatgaagatgatttaggtggtatgttagaggacgacccttttgtgtag</cdnaseq>

Protein Sequence

<aaseq>MVPVEMEVDDPRGWDFVDWVGPDASASIFRSLDDPADIVRAAAV SRSWRRFVVENEFSKSICLRICPEIANFTSAEEVSRSPPQPPHAESSHGVQRKALERD YRIYSYLSGALVSNSPSMDCILQCIGASSTDNFPDETIENTLIPHDRVKHRPSYWSSG GHDDPDTPETLTYRLNCDMCIVDEIKLQPFKAYFQYGHPIYSSKAVRFRMGHSKLPHG SDSFVTVEDENLMAIADENYVWTYTSPEFPMLQENVLQSFKLPRPVLCIGGIVKVELL GRVQKQEADDRYYICICHAQVRGRSLSPVFMVDTSDPAGYSVLKYLPDAKILRSEDAM LDDGSESLEWHSLVARYRRMRHLAIMNVLLGPEEFMDEDDIIGGVLMDEDDLGGMLED DPFV</aaseq>

Gene Sequence

<dnaseqindica>121..274#361..780#893..1071#1854..1972#2466..2784#ggcggttgggcgtctcgtcccgtctcgtctcgtctccccacgacaagaagagaggcggtgcgcttctcctcctctcctgtcctctcctcctctcgtcgagcggcgacgcagaagagtagtatggtgcccgtggagatggaggtggacgacccccgcggctgggacttcgtcgactgggtcggccccgacgcctccgcctccatcttccgctccctcgacgaccccgccgacatcgtccgcgccgccgccgtctcccgctcctggcgccgattcggttcgccccctcctcccaatccaccactcctcgtgttcgcgctgcttagtttggatttaatttcttgatttgtttgttttgggcagttgttgagaacgaattcagcaagagcatatgcttgcggatatgcccggagatcgccaatttcaccagcgcggaggaggtgagcagatcgccgccgcagccgccgcacgccgagtccagccatggcgtccagcgcaaggccctcgagagggactacaggatctactcctacctcagcggcgccctcgtctccaacagcccctccatggactgcatcctgcaatgcatcggcgcctccagcaccgacaacttccccgacgagaccatcgagaacacgctcataccacacgatcgggtcaagcaccgcccctcctactggtccagcggcggccacgacgatcccgacacaccagagaccttgacgtacaggctcaactgtgatatgtgcatcgtcgatgagatcaagctgcagccattcaaaggtacaagtcaggatatgcctaattaagaccgtgaatctcagaacgcccttggatattacaagttgcttgctcgattgcatagattacactgacctcggtttcaaactgccagcttattttcagtatggacatcctatatactcttcaaaggcagtcagattccggatgggccattccaagcttcctcatggctcggattcctttgttacggtcgaggatgagaatctgatggcaattgctgacgagaattatgtgtggacttacacttcaccagagttccccatgttgcaggtgagttgttggggccttttcttgtttactactttgttgacctgtccacaaccgagcaacttcatattaagactgcttttagatgctttattcggcctgtcatgatcaattgcttcaactggaacatataaaatagaattgtatcaccttttggaaattcctaagttggtatacctgggcaagtttttatttttcgccaggatggtggcgaaggaagtccggtcaattttattaagatcatgaggagtgaagtatggtttttgtattaggttccatcctaacatagtttgacaacttaaaagctcaggacaggccctgaggtaggaagaagcacatatatatctgggaaagtagtttggcttgttttggcggttctatagaaagttgtctcgttgcatttatcaatatgaaaaccacatacacaatttggcatccagaagtatacaacaaatttgcatgttatctcaaatcagcatttcagagattctggtgacatcatttttttgttacttctctgtcatgtagtattttagtaggaggctgttaccttttttgtgcttcttcccttacaaactacagcaaattgctacaggcttgccatctaatttatattaatttgaaccaattaaggattgatctgttaccgaattccaagcatgttttctttccaggtggacatgattatgcattgcgatattagtgatgctgtaatgatctaatgaagcaacaccacaattgggtaaaataccatccttactgatgccataacattgatgtgataggaaaatgtgctacaatccttcaagcttccgcgcccagtcctttgcattggtggtatagtgaaggttgaactattgggcagagtacaaaaacaggaagcagatgataggtactacatatggtaagttcttctcaatgtttagcctacttatgttgattggtcaccttatatttgctgctatagttttgttcaacaaatattgaggatggcaagaatcctttttacgaaaaatcagcatgacaaaccatgcaaatttagagagtcaacatatcggcactctggcttggagtagggtacacatctttactggttttactgcaccttaaagagcagaattgtgcacatcagagtcatatttctatgcaatcgtaattgcattgcaattttgctgttacactttatctggtggcatatgacgttttttttgcttatgcttgtatgcttcaggatgtaggatgtgcatttgtgcataatgttggcataactatgaaaacatgaaagtttatctctgcagtagagttttctttgcatatgcacttgaaaatttccttgaatatggacagtacagatgcttataattgctacgcttttttgcatgttaaatggttcacagtatctgccatgctcaagtgagagggcgttcactttctccagttttcatggttgatacctctgatcctgctggttattcagtcctcaagtacttgccggatgcaaaaatcctacgctccgaggacgcaatgctggacgatggcagcgaatcgctggagtggcactcacttgttgctaggtacaggcggatgaggcatctagcgataatgaatgtgcttcttggacctgaagagttcatggatgaagatgatattataggtggcgtgttaatggatgaagatgatttaggtggtatgttagaggacgacccttttgtgtaggcttgctgctacagaaccacccgggttttaaactctctgtagttagttttccttgcagacatctgtgaaacattctgcaacttcgtcgagaaaatacagttgttctgatctggagagaagaacaaatggattgttactgcgctcaatcttgatcatgtttatatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0116800, RefSeq:Os03g0116800