Os03g0117100

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0117100| Description = Peroxisomal biogenesis factor 11 family protein| Version = NM_001055300.1 GI:115450328 GeneID:4331408| Length = 2060...")
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Gene Name

Os03g0117100

Description

Peroxisomal biogenesis factor 11 family protein

Version

NM_001055300.1 GI:115450328 GeneID:4331408

Length

2060 bp

Definition

Oryza sativa Japonica Group Os03g0117100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:936383..938442

Sequence Coding Region

936728..936769,936868..937041,937158..937232,937321..937401,937536..937610
,937699..937773,937894..938085

Expression

GEO Profiles:Os03g0117100

Genome Context

<gbrowseImage1> name=NC_008396:936383..938442 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:936383..938442 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcacgttagatgccacgcgagcagagctcggccttgttgttctgtacttgaacaaagccgaggccagggacaagatatgcagggcgatccaatacggctcgaagtttatcagtaacgggcagcctggcacggcacaggatgtcgacaggtccaccacccttgctcgcaaagttttccggcttctcaagtgggtcaatgatctgcatggtcttatcagccctcctgctaaggggactcctcttacactggtcttgcttgggaagtccaaaaatgcgctgctctcgactttcttgttcctggaccaatttgtatggttgggaagaacagggatatacaagaacaaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctcttcagtctgtgcagggctagttgagcttggagagcttaagaggctatcaaaatcaatgaggaagctggcgagagagctgagggatactgacaaatatgagaatgaccagtacaagagcaagatgaaacagtcggatgaacggctgctagcactggtgaaggcggccatggatgttgtggtggccgtagggcttcttcagctgtcacccaagaagatcactccaagggtaacaggggcatttggattcgtcacctcactcatttcctgctatcagcaacttccatctcgtgctcccgctatcaaagtgaaggcatga</cdnaseq>

Protein Sequence

<aaseq>MSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPG TAQDVDRSTTLARKVFRLLKWVNDLHGLISPPAKGTPLTLVLLGKSKNALLSTFLFLD QFVWLGRTGIYKNKERTDRIVRISLYCWMASSVCAGLVELGELKRLSKSMRKLARELR DTDKYENDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTS LISCYQQLPSRAPAIKVKA</aaseq>

Gene Sequence

<dnaseqindica>1674..1715#1402..1575#1211..1285#1042..1122#833..907#670..744#358..549#gctccagtctccaggaggagtggaagggctcggcaaacatcaggtagccgtccctcctttatccacttcgctctcttctctgcagcgctgcatcctactccctggttagcaatagcaaggtaattaattgatcagacatccctaatctcactgcttcctgcacctttgctgattctagcgatgcttccaggcttatgctgcagtgcactagtttcatttccagacaagcttttttaatctgaagaaagcatagaagtagctagatgattggtgctttggtagatatgttgtatatgtgcatttgattttgtgaattttctgtggctctctcgtctttggttacttcagggtaggaagatgagcacgttagatgccacgcgagcagagctcggccttgttgttctgtacttgaacaaagccgaggccagggacaagatatgcagggcgatccaatacggctcgaagtttatcagtaacgggcagcctggcacggcacaggatgtcgacaggtccaccacccttgctcgcaaagttttccggcttctcaaggtcactaacgatgatatccttccttgcttgctagtactagttgatacttgtatcgaacagcagttaactcagcgtcaggcaacttatgttctttcaactgtttctgtcttgcatttgcagtgggtcaatgatctgcatggtcttatcagccctcctgctaaggggactcctcttacactggtcttgcttgggaaggtatttcttttcttttacaaaaattcgaacaaagaattatctgcttgagaatgatgcgattgttaaccaaaggcttttacaattgcagtccaaaaatgcgctgctctcgactttcttgttcctggaccaatttgtatggttgggaagaacagggatatacaaggttgtcaagattgatacacggttcagcagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttggccttgtgttgatatacaagattgtctaaatgatatattttttttctgttcttgctgctagaacaaggagcgcacagaccggattgtaaggatatccctctactgctggatggcctcttcagtctgtgcagggctagttgaggtataaatacttcagtaattcactgcaattctttacctcattttgatagtcaataaaaatcattgaacatatatataccatttggcagcttggagagcttaagaggctatcaaaatcaatgaggaagctggcgagagagctgagggatactgacaaatatgaggtgtgcattctttcatcatctctgcatcccactggaaactgatgacgattgacgagtacaaattttatagagcttatgcaattaaccttctcgctctttttctgcttggtttgtagaatgaccagtacaagagcaagatgaaacagtcggatgaacggctgctagcactggtgaaggcggccatggatgttgtggtggccgtagggcttcttcagctgtcacccaagaagatcactccaagggtaacaggggcatttggattcgtcacctcactcatttcctgctatcaggtacccactgaatctgttcatccagtcaatgttcttggagaattttagtgagactagcactggaattttgtactcaactgtcccattttgccatgcagcaacttccatctcgtgctcccgctatcaaagtgaaggcatgatggatatttgccgttgtagcccaaagggagtccatcactggaatctgcagacgtaattcttaagcatggattgtgagataatctgtctatgataatcagtatagaatactttcagttgtacgtatggtttatggcttcacacaataccctcctgaactgtaatgaacatggtttatgtgttcatgcatgtcttctactttgtactccaacatggctgccaaatttatactcattggagcatgtatgcccactactccccaacatgctagtagaatagaagtacaataatttcttttgagagagatatgttataatagttcttcactaatactaagtatctatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0117100, RefSeq:Os03g0117100