Os10g0151500

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0151500| Description = EGF domain containing protein| Version = NM_001070714.2 GI:297610114 GeneID:4348125| Length = 6850 bp| Definition =...")
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Gene Name

Os10g0151500

Description

EGF domain containing protein

Version

NM_001070714.2 GI:297610114 GeneID:4348125

Length

6850 bp

Definition

Oryza sativa Japonica Group Os10g0151500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3069605..3076454

Sequence Coding Region

3069605..3070535,3071127..3071294,3075307..3076454

Expression

GEO Profiles:Os10g0151500

Genome Context

<gbrowseImage1> name=NC_008403:3069605..3076454 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3069605..3076454 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcattctggctacttgcagacctgctgattcttctggcttctgccgcggagagcatctccggccggcctgccgccggttgccagacacggtgcggtgacgtcagcatcccctacccgttcggcatcggccccaactgctcccatgggaagggcttcgagatcgcctgcgatacccgaacccgaaacggcagcggcgagttggtgccgaccctcgccgccgccaatggcaccatccatgtgcagagcctgtttgtagcgccgatcccggaggtcaaggtgatgctgccggtggcgtaccagtgctacaactccagcgacagcgtcaccgagagtttcttcggcgcggtagacctcaacaacaacggcgtgtaccgcatctccgacaagcgcaacatgttcgtcgtcctcggctgcaacaccatggcctacacgaacaacggggacagtcatggcaaaggcccttacgccggcctctactacaccggctgcgtctcctattgcaacgactcgtcgagcgcgcaggacggcatgtgcgccggcatcggctgctgccatgtcgacatctcgccgggcctcagtgacaacgtcgtcaccttcggcgagtggtcacgctatttccaggtggacttcaacccctgcaactacgccttcctcgtcgccaaggacgaatacaacttccagaggtcagatctccaaaaggacctcaaccggaccaagccggtgtggctggactgggcgatccgcgacggcggcaactcctccgcatcatcgtcctgccctgcgccggaggtgagggagaagatgccgcctgagtacgcctgtgtgagcgacaacagcgaatgcgtcaactccaccaatggcccaggatactactgcaagtgcagcaaaggctacgagggcaacccctacctagtcggaggttgcaacgatattgatgagtgcgctcgctcggatgaatatccctgccacggggactgcagaaacaccgtaggagattatcactgcaaatgtcgcacaggttaccagcctagaggaggcggtcccaagatagacgagtgcagccaaaagttccctctacctgcacaaattgctctcggcataagcctgggattttctttcctgatagttgctgcactttttactctaatgatgctccaaaagagaaaaattaatgagtatttcaaaaagaatggtggttcaattctacagaaagtggacaatatcatgattttctccaaagatgatctaaagaaaatcacaaagaacaattcacacgttattggccaaggaggttttggtaaagtgttcaaagggacgcttgaagataatacaatggtggcagtgaagacttcaattgaggtaaatgaagctcggaaggaggatttcacaaatgaagttataatacaatcgcgaatgatgcacaataacattatcaagctattgggttgttgcttggaggtggatgttccaatgttagtgtatgagtttgccgctaatgggagtctgcaagacattctccatggtgatgccaatcgctcactccttctcacactagacatacgcttggacattgcaattgaatctgcagaaggtctaaaatacatgcactcgtccacaaattgtaccatacgacatggtgatgtcaagcctgccaatatacttttaacagacaagttcgtccctaagatctcagactttgggacatccaagcttcttacagtagataaagacttcaccatgtttgttgttgggagcatgggatacatagacccaatattccataagactggtcgtttaacgcagaaaagtgatgtttatagttttggtgttgtattgctagagctcattagtagaaagccaactatatatggcgagaactttagcctcatcatcgagttccagaaggcctatgatgaagtacacagtgggagggcaatgtttgataaggagatcgcggtggaagaagatatctttatcttggaagaaattggtaagttggcaatggagtgtctaaaagaaaaggttgaagaacgacctgatatgaaggaagtagcagaacgacttgtgatgttgcgaagagccagaaagcatggacaaggaagctataatttgagtcctagacaccatgaggagattagtattgaaacaactcctacgagttttggtgctgattttagcacaaatagtagtgtgagtctttctgcaacatgcactccagaacgcaaagaactctacaagctatag</cdnaseq>

Protein Sequence

<aaseq>MAFWLLADLLILLASAAESISGRPAAGCQTRCGDVSIPYPFGIG PNCSHGKGFEIACDTRTRNGSGELVPTLAAANGTIHVQSLFVAPIPEVKVMLPVAYQC YNSSDSVTESFFGAVDLNNNGVYRISDKRNMFVVLGCNTMAYTNNGDSHGKGPYAGLY YTGCVSYCNDSSSAQDGMCAGIGCCHVDISPGLSDNVVTFGEWSRYFQVDFNPCNYAF LVAKDEYNFQRSDLQKDLNRTKPVWLDWAIRDGGNSSASSSCPAPEVREKMPPEYACV SDNSECVNSTNGPGYYCKCSKGYEGNPYLVGGCNDIDECARSDEYPCHGDCRNTVGDY HCKCRTGYQPRGGGPKIDECSQKFPLPAQIALGISLGFSFLIVAALFTLMMLQKRKIN EYFKKNGGSILQKVDNIMIFSKDDLKKITKNNSHVIGQGGFGKVFKGTLEDNTMVAVK TSIEVNEARKEDFTNEVIIQSRMMHNNIIKLLGCCLEVDVPMLVYEFAANGSLQDILH GDANRSLLLTLDIRLDIAIESAEGLKYMHSSTNCTIRHGDVKPANILLTDKFVPKISD FGTSKLLTVDKDFTMFVVGSMGYIDPIFHKTGRLTQKSDVYSFGVVLLELISRKPTIY GENFSLIIEFQKAYDEVHSGRAMFDKEIAVEEDIFILEEIGKLAMECLKEKVEERPDM KEVAERLVMLRRARKHGQGSYNLSPRHHEEISIETTPTSFGADFSTNSSVSLSATCTP ERKELYKL</aaseq>

Gene Sequence

<dnaseqindica>1..931#1523..1690#5703..6850#atggcattctggctacttgcagacctgctgattcttctggcttctgccgcggagagcatctccggccggcctgccgccggttgccagacacggtgcggtgacgtcagcatcccctacccgttcggcatcggccccaactgctcccatgggaagggcttcgagatcgcctgcgatacccgaacccgaaacggcagcggcgagttggtgccgaccctcgccgccgccaatggcaccatccatgtgcagagcctgtttgtagcgccgatcccggaggtcaaggtgatgctgccggtggcgtaccagtgctacaactccagcgacagcgtcaccgagagtttcttcggcgcggtagacctcaacaacaacggcgtgtaccgcatctccgacaagcgcaacatgttcgtcgtcctcggctgcaacaccatggcctacacgaacaacggggacagtcatggcaaaggcccttacgccggcctctactacaccggctgcgtctcctattgcaacgactcgtcgagcgcgcaggacggcatgtgcgccggcatcggctgctgccatgtcgacatctcgccgggcctcagtgacaacgtcgtcaccttcggcgagtggtcacgctatttccaggtggacttcaacccctgcaactacgccttcctcgtcgccaaggacgaatacaacttccagaggtcagatctccaaaaggacctcaaccggaccaagccggtgtggctggactgggcgatccgcgacggcggcaactcctccgcatcatcgtcctgccctgcgccggaggtgagggagaagatgccgcctgagtacgcctgtgtgagcgacaacagcgaatgcgtcaactccaccaatggcccaggatactactgcaagtgcagcaaaggctacgagggcaacccctacctagtcggaggttgcaacggtaagaacacgtacacgagacaaacaatctactctttcctactcgctatctttcatattgttagacattttaattttttaggcctactaccgaatgctacacagttctaatgaaatagctcatatgtgctgacgatatcttaggtaccacaggtaccaaacacgatactcatagataccatactttgatatctgggtattataataacgtcagtatggtacctacaatactagatttgatatcgggtatcaaacatgatatctcataagtatcaaatcatgatacctacctaacatactgatttcaactatatcgtttgaacggtattgccattttatagtatttttgttaattttttcaaagtcaaacttttcttacgtttgacaaaattagtttaaaaaaaatagcaacatttataataccaaatcaaaatgtgttatattatgaaatagagggagtattgagtttgcactattgtgcatcccacgctagtcatgccatctatgtctgtttaccaatacaattttttttaaaaaaattcaaattaagttatttgtacacccgccattgaatcgaacagtatatatgcagatattgatgagtgcgctcgctcggatgaatatccctgccacggggactgcagaaacaccgtaggagattatcactgcaaatgtcgcacaggttaccagcctagaggaggcggtcccaagatagacgagtgcagccaaaagttccctctacctgcacaaattgctctcggtatgtgccttccaaccaaagtatttcttttataggaggaaccaaagtactttgtttcattctaaaatttgaaatatctagacgcctaaaataatttgttgaaaacggtgtactaaattaaagatgctcccttgcatatatatactcgcaagactatacttgatatatccatttaattcatgcggcttaacgcttttgttcaatgtttattcaaaagtagaaaactaagagcataaaaggaataattaaagcaaaaccctaattaagaggatggaaaagattgagccaagatcaaactatgcggcaggctgtatatgtattcccaaaacaacatgaactagtgaacaaatggagtatataaaatcaattaatgaaaaacaaaattgtttaattcaatactctacagtgagcatctttttctatgagatgtacaaggaaggtgtaatatagtcattcctgaaaagaaactaacggtaaattcacgtagtcaactatttcaactcctagcttacatctggagatgactccgcattaaactatatcggacgcccacccagcctgcatatatatggtaagcacggctgggctcagatcctgcagagtggcagattggcctcaccaaatcgccttttgttcactctaatatgcgtagtcgcccctcgtatgattatactttgaattttgtagttatttgtcgatcgtttgcattaatatatacataaaatgattgttgatatgattttggatatattttaacatgttcttctagatttatatataaaattaaacttattttagtatggagagtgtatgtccgagtccgaatatactttaatgtagcataaaaagaatcatttttaaaccatgtcactaaatagcaccaacactactcagtacttgaatgacatgacatcatttctattcatcctttttagttttggagacttgcagccacatcccttagctatgtcaattaactcaggtggatagctagatatagacaactaattaatgagcgaattgtattgattagatggctaatcacccgaaggtttgcatgcagcgcatggggatagggggtgccaggcccaccctggcaccctcggtggcttcgccactgcttctcacggcccgatgttgtgcattgtgcatggagcccacccgacctatctatcatgcattcttttttcacttttcttatgcgtatacattgttttatatcaaattttaaataatattgtatcgaaaagtgcatatccaatctaccaatctaccatttgattacattattatatttgttataatcaaaacattttagaaagatctcacacaattatactttgataaagaattatccattgtttcacaatttatagaaaattatgctatcacgtgtgcaaatgtttcaactcacctcattatttaagaggaatgaaatatataaacatattacaacaaaacattacatatatatcaacgagtgaaacataaacaacaaaattcatatgataaatatatgtttgcaaatacttaattttataggaggtgtagattagagctgtcatacatacacacacgtacacatatatttggggcgtataaaaaaataggagttcatacacatataatatacgtataattttttttgtatgtatacgttcagaataagtaccccataccgccgtatgtagatctcgcattagcgttttaggatgtcacctgccccaaagtgagggattgcttgtagagaaacgtcaggagcagaactgacatttgttcagtcaaacattattaacacattcgatagaacagtgtcagccccttataacagcggattagtggaaaatatgccagctgcacttcaatgacatttaatatggggaatattttaactgtttgtcactttaaaaaaaatgtcacaactcatatactacggctgtgtttagatctaaagtttggatccaaatttcagtcctttttcatcatatcaacttgtcatacacacaacttttcagtcacatcatctccaatttcaaccaaaatccaaactttttacttttatgataagtaatttttcactctttgctgacatgcatggcatgccagcctgcactcccacggtggacaagacgtgtgaaatgtttatcttacccctcgtgaaccctacaagtcagctgtatctctttgttctctatcagtatagatggccaaagggcccgcccggcacggccccgcccaggcacggctgggcacggcccagcagccatcgggccggcacggcccgcccatgggctgcacctcctgcccaggcacgacctaccagctgtcgggccgtgccgtgctggcccgaaggcatgggtggcccatcgggcctttttaaaataagtctattttttttccctcctctctaggctatttcatttgtatagctaaaataagtctattttccgtccctcctctttgggctgtcatgtgtatagctaaaataagtctattttctgtccctcctctttggctgacatatgtatagataataaaagtctattttagatccctatgctttcgttcatggcatataatgtctatttttactcccctatttttttgtgtatcgggcctagctgccggcccatcgtgccgggccggcccggccgtgccgggccgggccggcacgggcccggcctccgtcgggccgtgccgtgcttgggccgggccaaaataccgtgccatgggctgggccatcgggcctcgggccttttggccatctatatctgtcagtggatccatccaggaaattaagcaccttcttgtcgtccgagttgacagcgatgggctggggttgctgccgctggaataggccaaaaaaggctgaaacatccatggtagcaaatagataaaattaacagagaaaacctagacaacggtatcccgttgtaacgggatactcttctatgagacagtacatatacctgatacatgttgtggtatcaactacatggtacccgatacctgcgatacctgttatctggtacctatgatacctaggacctgatacctgtgatactcgtgcaagagaatagttaatatgtctatcccgttgtaacgggatcccgttttgtagcagccctctaaaattaaaggactgcgtggagcacacaaatgctaaattaattaagccaagttcgatagataaatgcaattcaccgttgtttttttaattggttggttgaaatgaaaaggcagggagctgaaccattcgaatttttttttttcatacacaaaattttcagaaatggatatggaagctttttcacatatcgttagggtttttatcaaatatgcctggatagtttcaatggacaaatggatcaactggagcaaagtattcgcactagtaaccgggaacatatcctatgcacactccgtgcataccaactagcaaatgccacgaaaattctacaaaacattatacacatacttcgaataatattacacctatatgtgaaattttatcttcaaattcattatattttggtcgtaataaaaaagacaaaattctgacacatttttaattacctagaaaactgtcagattttttttgttacggctaaaatataatgaacttgaatatgagactttatatatatgtgtagtactaataggagtaaatgtttaattttatagaatttttcgtgatatttgttagttggtgcgcacgagaaacatgtgtacatagaatatgttcctggtaaccatatatgatctttagtgagttacaaatatcctaactattttcatatttttcattcgtaggaaaaaaaacaattctttagcttttgcatgtcagtcgtacatgcataatatatataaacattacactgttgatatatagtaatatatattcatctcaagtgagcattcgttattattttctattataagttgataacaacaaaatcacaagtcaaatgtatttgttatcgttgctaatgagaacttatgatctttgtaggcataagcctgggattttctttcctgatagttgctgcactttttactctaatgatgctccaaaagagaaaaattaatgagtatttcaaaaagaatggtggttcaattctacagaaagtggacaatatcatgattttctccaaagatgatctaaagaaaatcacaaagaacaattcacacgttattggccaaggaggttttggtaaagtgttcaaagggacgcttgaagataatacaatggtggcagtgaagacttcaattgaggtaaatgaagctcggaaggaggatttcacaaatgaagttataatacaatcgcgaatgatgcacaataacattatcaagctattgggttgttgcttggaggtggatgttccaatgttagtgtatgagtttgccgctaatgggagtctgcaagacattctccatggtgatgccaatcgctcactccttctcacactagacatacgcttggacattgcaattgaatctgcagaaggtctaaaatacatgcactcgtccacaaattgtaccatacgacatggtgatgtcaagcctgccaatatacttttaacagacaagttcgtccctaagatctcagactttgggacatccaagcttcttacagtagataaagacttcaccatgtttgttgttgggagcatgggatacatagacccaatattccataagactggtcgtttaacgcagaaaagtgatgtttatagttttggtgttgtattgctagagctcattagtagaaagccaactatatatggcgagaactttagcctcatcatcgagttccagaaggcctatgatgaagtacacagtgggagggcaatgtttgataaggagatcgcggtggaagaagatatctttatcttggaagaaattggtaagttggcaatggagtgtctaaaagaaaaggttgaagaacgacctgatatgaaggaagtagcagaacgacttgtgatgttgcgaagagccagaaagcatggacaaggaagctataatttgagtcctagacaccatgaggagattagtattgaaacaactcctacgagttttggtgctgattttagcacaaatagtagtgtgagtctttctgcaacatgcactccagaacgcaaagaactctacaagctatag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0151500, RefSeq:Os10g0151500