Os03g0118700

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0118700| Description = Alcohol oxidase family protein| Version = NM_001186311.1 GI:297721752 GeneID:9271148| Length = 2129 bp| Definition ...")
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Gene Name

Os03g0118700

Description

Alcohol oxidase family protein

Version

NM_001186311.1 GI:297721752 GeneID:9271148

Length

2129 bp

Definition

Oryza sativa Japonica Group Os03g0118700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:986730..988858

Sequence Coding Region

986730..986835,986923..987545,987650..988060,988127..988701,988801..988858

Expression

GEO Profiles:Os03g0118700

Genome Context

<gbrowseImage1> name=NC_008396:986730..988858 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:986730..988858 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctggtcataggcacggctcagtgccaccagtggtgttactcctactagtagccactgtgcttggctccctctgccttagcctcaccgcttcacccgaagcgcaaaaagggtacaattttcggttcgcgaggcacgcgcgggacgcgccgctggtgtcatattacaactacatcgtcgtcggcggcggcacggccgggtgcccgctggcggcgacgctgtcggagcggtcgcgcgtgctcctcctggagcgcggcggcctcccctacggcaaccgcaacgtgtccagcgagtaccacttcgccgacgcgctggccgacacgtcgccgaggtccccggcccagcggttcgtctccgaggacggcgtcgtgaacgcccgggcgcgcgtgctcggcggcggcagctgcctcaacgccggcttctacacccgcgccagcagcggctacgtgcgcgccgccggctgggacccccgcctcgtcaacgcgtcgtaccggtgggtggagcgcgagctggtgttccgccccgacgtgccgcggtggcagtgcgcgctgcgcgagggcctcctccaggccggcgtcacgccggacaacggctacacgctcgaacacgtccagggcaccaagatcggcggcaccatcttcgaccgcgccggccgccgccacaccgccgccgacttcctccggcgagcccacccgaggcggctcaccgtgttcctccgcgccaccggcacggcgacgccggtggcgtacggggtggtgttcacggacccggcgggcgtgcggcaccacgtgtacctgcgtggcggcgccaagagcgaggtgatcgtgacggcggggacgctggggagcccgcagctgctgatgctgagcggcgtcgggccgcgcggggagctggagaagcacggcatcctccccgtgctggaccagcccagggtcgggcagggcgtggcggacaaccccatgaactcggtgttcgtcccctccccggtgcccgtcgcgctctccctcgtccagatcgtcggcgtctcccgcttcggcaccttcatcgagggcgtcagcggctcgcagttcggcatcccgctccacggccgcgccgcctcccgccgcgcccgcagcttcggcatgttctcccccatgacggggcagctggggacggtgccgccgaaggagcggacgccggaggcgatgcggcgggcggcggaggcgatgcggcggctggacaggcgcgcgttccgcggcgggttcatcctggagaagatcctggggcccatgtcgacggggcacgtcgcgctccgatcagccgaccccgacgcgaacccggccgtgacgttcaactacttccgggacccgcgcgacgtggagcggtgcgtgcgcggcatcgagacgatcgagcgggtggtgcggtcgcgggccttcgcgcggttcacctacgccaacgtcaccgccatggaggccgccgtgcttggccgccgcgccggccacctccccgtcaacctgctgcctcgccgcgccaccgacacgcggccgctgcagcagtattgcagggagacggtgatgaccatctggcactaccacggcggctgccatgtcggcgccgtcgtggaccaggactaccgggtgctcggcgtacgtggcctccgcgtcgtcgacagctcaaccttcaagtactcgcccggcaccaacccgcaggccaccgtcatgatgctcggcaggtatatggggctgaagattcagaaggagaggtggacgaggaacgacgagacacattag</cdnaseq>

Protein Sequence

<aaseq>MAPGHRHGSVPPVVLLLLVATVLGSLCLSLTASPEAQKGYNFRF ARHARDAPLVSYYNYIVVGGGTAGCPLAATLSERSRVLLLERGGLPYGNRNVSSEYHF ADALADTSPRSPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRASSGYVRAAGWDPRL VNASYRWVERELVFRPDVPRWQCALREGLLQAGVTPDNGYTLEHVQGTKIGGTIFDRA GRRHTAADFLRRAHPRRLTVFLRATGTATPVAYGVVFTDPAGVRHHVYLRGGAKSEVI VTAGTLGSPQLLMLSGVGPRGELEKHGILPVLDQPRVGQGVADNPMNSVFVPSPVPVA LSLVQIVGVSRFGTFIEGVSGSQFGIPLHGRAASRRARSFGMFSPMTGQLGTVPPKER TPEAMRRAAEAMRRLDRRAFRGGFILEKILGPMSTGHVALRSADPDANPAVTFNYFRD PRDVERCVRGIETIERVVRSRAFARFTYANVTAMEAAVLGRRAGHLPVNLLPRRATDT RPLQQYCRETVMTIWHYHGGCHVGAVVDQDYRVLGVRGLRVVDSSTFKYSPGTNPQAT VMMLGRYMGLKIQKERWTRNDETH</aaseq>

Gene Sequence

<dnaseqindica>1..106#194..816#921..1331#1398..1972#2072..2129#atggcgcctggtcataggcacggctcagtgccaccagtggtgttactcctactagtagccactgtgcttggctccctctgccttagcctcaccgcttcacccgaaggtacatgagaaatcacgtacgtgttgctcatgtgttgtgttttttttatagaactttgacaatgtggtcgtgcgtgtgtcgtggcagcgcaaaaagggtacaattttcggttcgcgaggcacgcgcgggacgcgccgctggtgtcatattacaactacatcgtcgtcggcggcggcacggccgggtgcccgctggcggcgacgctgtcggagcggtcgcgcgtgctcctcctggagcgcggcggcctcccctacggcaaccgcaacgtgtccagcgagtaccacttcgccgacgcgctggccgacacgtcgccgaggtccccggcccagcggttcgtctccgaggacggcgtcgtgaacgcccgggcgcgcgtgctcggcggcggcagctgcctcaacgccggcttctacacccgcgccagcagcggctacgtgcgcgccgccggctgggacccccgcctcgtcaacgcgtcgtaccggtgggtggagcgcgagctggtgttccgccccgacgtgccgcggtggcagtgcgcgctgcgcgagggcctcctccaggccggcgtcacgccggacaacggctacacgctcgaacacgtccagggcaccaagatcggcggcaccatcttcgaccgcgccggccgccgccacaccgccgccgacttcctccggcgagcccacccgaggcggctcaccgtgttcctccgcgccaccgtgtcgcagatcctcttccgacgcaccggcacgtaatcgtcaacttgcatggtttgcgcaaccattttttagctctaaaactgacacgacaagtgtttgcagagggcacggcgacgccggtggcgtacggggtggtgttcacggacccggcgggcgtgcggcaccacgtgtacctgcgtggcggcgccaagagcgaggtgatcgtgacggcggggacgctggggagcccgcagctgctgatgctgagcggcgtcgggccgcgcggggagctggagaagcacggcatcctccccgtgctggaccagcccagggtcgggcagggcgtggcggacaaccccatgaactcggtgttcgtcccctccccggtgcccgtcgcgctctccctcgtccagatcgtcggcgtctcccgcttcggcaccttcatcgagggcgtcagcggctcgcagttcggcatcccgctccacggccgcgccgcctcccgccgcgcccgcagcttcggcatgttctcccccatggtacgttaggctagctagctgcatgcagcgtgcaaactaattaatggatgtttcattacgaggcagacggggcagctggggacggtgccgccgaaggagcggacgccggaggcgatgcggcgggcggcggaggcgatgcggcggctggacaggcgcgcgttccgcggcgggttcatcctggagaagatcctggggcccatgtcgacggggcacgtcgcgctccgatcagccgaccccgacgcgaacccggccgtgacgttcaactacttccgggacccgcgcgacgtggagcggtgcgtgcgcggcatcgagacgatcgagcgggtggtgcggtcgcgggccttcgcgcggttcacctacgccaacgtcaccgccatggaggccgccgtgcttggccgccgcgccggccacctccccgtcaacctgctgcctcgccgcgccaccgacacgcggccgctgcagcagtattgcagggagacggtgatgaccatctggcactaccacggcggctgccatgtcggcgccgtcgtggaccaggactaccgggtgctcggcgtacgtggcctccgcgtcgtcgacagctcaaccttcaagtactcgcccggcaccaacccgcaggccaccgtcatgatgctcggcaggtaatttaacccaagtgcatgccttcattttcagctaaattttgtttggtttggcgcttgcttggatgaaattcagtcgaacatgcattgcgcacacaggtatatggggctgaagattcagaaggagaggtggacgaggaacgacgagacacattag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0118700, RefSeq:Os03g0118700