Os03g0118900

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0118900| Description = Armadillo-like helical domain containing protein| Version = NM_001055310.1 GI:115450348 GeneID:4331419| Length = 307...")
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Gene Name

Os03g0118900

Description

Armadillo-like helical domain containing protein

Version

NM_001055310.1 GI:115450348 GeneID:4331419

Length

3074 bp

Definition

Oryza sativa Japonica Group Os03g0118900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:999805..1002878

Sequence Coding Region

999906..1000437,1001337..1002196

Expression

GEO Profiles:Os03g0118900

Genome Context

<gbrowseImage1> name=NC_008396:999805..1002878 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:999805..1002878 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggaagccgaggagatcgaggacgaggaaactctagaggcgcttctagaagcttcccgaagcgcccagggccgggccgcgctctccgacgccctcgccgacaccctccacctcctgccggcctccacccaccgcctcctgctcctccgcctccgcctcctccgcaacctcctcgccggcgacgacctcaaccagggcaccttcgtcctcctctccggccccgccgcggtcgtctcctccgccctctcctccccctccgactcccccgacgtcgcgcgcgcgggcctccaggcgctgggcaacgccgcgctcgccggggagcaccaccgcgccgccgtctgggatgcgctcttccctggctcgctgctggagctcgcgcgggtcagggagaagggagtcctcgacccactgtgcatggtgatcgacacctgctgctccggcgaaggcggccgcgggaggctcgaggagctctgccacgaggagttagggctgcccatacttgtggaaatcgtcactactgcctggcaagtggggcatgatgaagaatggttagaatggcttctcttcaaaatctgtgttgaggagcaaaagtttgaaacattgtttgtagctttatgctcacgcaatgatgctgagcacagtgatggtgatgaatgcaaaactgagtttaatgctaagcatgcatatcttttgggtaaattgtcaaaatgtttggctaaccgacctaaagaagtcagtgtatcgatcagttttgcacttgatattttcaatgcacagaagcatgctgctgagattgtggattttacttgccgagttaactctcctcttccaactggtcaccctgcaattgatgtacttggatattcattggtgctcttgaaggatatatgtgcttgggaatcccctccgtcagacacacaggctcctgttgactcactgatgcagactggtcttgtaaagcatcttctaacgtacttacgtgagctagaacccccaagtatgatcagaaaatctatggcaaggggacaaggagatcatcaaccagccttaggaactgcaaaagtctgcccatacattggttacaggagagatgtagtcgctgtgattgctaattgcttgcatagaagcaaaaaagtgcaggatgaggtgaggcacctggatgggattattttactcttgcagcagtgtgttgttgatgaagaaaacccatacttgagggagtggggtctttttgctgtgaagaacttgcttgaaggaaatgaggaaaaccagaaggaggtatctggacttaagatgcaagaagctgttataactccagagattgctgacataggtctaagagtggagatagacaaggaaacaggacatccgaaactggttaataactga</cdnaseq>

Protein Sequence

<aaseq>MWEAEEIEDEETLEALLEASRSAQGRAALSDALADTLHLLPAST HRLLLLRLRLLRNLLAGDDLNQGTFVLLSGPAAVVSSALSSPSDSPDVARAGLQALGN AALAGEHHRAAVWDALFPGSLLELARVREKGVLDPLCMVIDTCCSGEGGRGRLEELCH EELGLPILVEIVTTAWQVGHDEEWLEWLLFKICVEEQKFETLFVALCSRNDAEHSDGD ECKTEFNAKHAYLLGKLSKCLANRPKEVSVSISFALDIFNAQKHAAEIVDFTCRVNSP LPTGHPAIDVLGYSLVLLKDICAWESPPSDTQAPVDSLMQTGLVKHLLTYLRELEPPS MIRKSMARGQGDHQPALGTAKVCPYIGYRRDVVAVIANCLHRSKKVQDEVRHLDGIIL LLQQCVVDEENPYLREWGLFAVKNLLEGNEENQKEVSGLKMQEAVITPEIADIGLRVE IDKETGHPKLVNN</aaseq>

Gene Sequence

<dnaseqindica>102..633#1533..2392#gctgcacgcctgcacggtatccccattccataaccattccagcaacagctgtctccttctctctccgccgccggcgaaaccgcaacggcgcagaggagaaaatgtgggaagccgaggagatcgaggacgaggaaactctagaggcgcttctagaagcttcccgaagcgcccagggccgggccgcgctctccgacgccctcgccgacaccctccacctcctgccggcctccacccaccgcctcctgctcctccgcctccgcctcctccgcaacctcctcgccggcgacgacctcaaccagggcaccttcgtcctcctctccggccccgccgcggtcgtctcctccgccctctcctccccctccgactcccccgacgtcgcgcgcgcgggcctccaggcgctgggcaacgccgcgctcgccggggagcaccaccgcgccgccgtctgggatgcgctcttccctggctcgctgctggagctcgcgcgggtcagggagaagggagtcctcgacccactgtgcatggtgatcgacacctgctgctccggcgaaggcggccgcgggaggctcgaggagctctgccacgaggagttagggctgcccatacttgtggaaatcgtcactactgcctggcaaggtgcgtgcgccgcaattagttgatgccttttttttttattcagtaaattcatctggtagatgtcctgcaagctttacacaggtcacacttgctattgtatgatcgtgggagcacgaattgtttagctgtttgtttctgtgaaactaatgtaaatcaacatgagtaggatgtgtgtatgtacactgtaaatcacatcataaggagtaagtaagatgtgcattctgtagacttcagcaatagaaaagtttgcgaactgttagttgttcattagtatgacaggaagtggtaatgtgctggaaaagtttggggaagtaacttgttcattagtatggacaggaattggtaatgtaatatctgggcctttgggtccaattgggtatcagatgctctcctgctagtatgttgagtgtggatagaggaaacggaatttagtaacttaagagggtggtttgtgatatggcattgttgaaatttttagattgacattttggcagataatgcctgttcacctacttcatgtgtggaaatatatcgccactgtgttgttttaagtaaaaggagttcggaccacactatcacaggtttcatatgttacattgaagtaaaaaaatatatatcagtgattggagctgtgatcatgtatatcttcacatagttgcctgcatcatgtctaaagtgctggatctgtgtttcctcacatattgagggcaggatttcacgtaactataacttgagaaataatacagtcatattttttttctttattatgtaactttacttcatagggactccttaggctgttgttgaagttcacattttgctctcaggttgttttatttgtttacatttttaatttatggttactttgatatgagtctaatccgaggtataaaatgcagtggggcatgatgaagaatggttagaatggcttctcttcaaaatctgtgttgaggagcaaaagtttgaaacattgtttgtagctttatgctcacgcaatgatgctgagcacagtgatggtgatgaatgcaaaactgagtttaatgctaagcatgcatatcttttgggtaaattgtcaaaatgtttggctaaccgacctaaagaagtcagtgtatcgatcagttttgcacttgatattttcaatgcacagaagcatgctgctgagattgtggattttacttgccgagttaactctcctcttccaactggtcaccctgcaattgatgtacttggatattcattggtgctcttgaaggatatatgtgcttgggaatcccctccgtcagacacacaggctcctgttgactcactgatgcagactggtcttgtaaagcatcttctaacgtacttacgtgagctagaacccccaagtatgatcagaaaatctatggcaaggggacaaggagatcatcaaccagccttaggaactgcaaaagtctgcccatacattggttacaggagagatgtagtcgctgtgattgctaattgcttgcatagaagcaaaaaagtgcaggatgaggtgaggcacctggatgggattattttactcttgcagcagtgtgttgttgatgaagaaaacccatacttgagggagtggggtctttttgctgtgaagaacttgcttgaaggaaatgaggaaaaccagaaggaggtatctggacttaagatgcaagaagctgttataactccagagattgctgacataggtctaagagtggagatagacaaggaaacaggacatccgaaactggttaataactgatgatgtaagtatctcggaccagaagttaaacttaattacatgtatacatcaactgtatctgcattttcttgtcatcttgtaatcctatgatggtttttgatatatggttggtcccacatctagttttgtagtatttcaaatctcacttatagttctgttatttaaatttgtgcatatattatcttgtgattggcaactatgtgcttgattcataactgagatgtatgttcaaattttcatatgaagaaatttggcttgcatgcaaacattttagtatcttctggcttctaaagttgctgaaagactggtgtttgtgtaaccttggtatgtcaaatgttgcattgcgttgcctgacagcatattttgttgtgcagactttccattttgatccttcatgtttgaggtgaaaagaaaagggagatcagactcacgtaccgacgttcctctcattaacggaagcaaactaatattgccgctgccttctgcacccccgggaagataggtgttgctttttttcattaatgttagtcatgttaatattgatggcgagcatttgaaccaccgggattcagatactttcttggagaaatgaatgctaatggttttttacgttgcatcaaaacagtgatgtgatgagatgtttctagatccactcttatcataggcgtccgttttttaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0118900, RefSeq:Os03g0118900