Os03g0121200

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0121200| Description = Similar to Peroxidase 1| Version = NM_001055328.1 GI:115450384 GeneID:4331437| Length = 3929 bp| Definition = Oryza...")
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Gene Name

Os03g0121200

Description

Similar to Peroxidase 1

Version

NM_001055328.1 GI:115450384 GeneID:4331437

Length

3929 bp

Definition

Oryza sativa Japonica Group Os03g0121200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1150597..1154525

Sequence Coding Region

1150944..1151522,1153348..1153536,1154137..1154364

Expression

GEO Profiles:Os03g0121200

Genome Context

<gbrowseImage1> name=NC_008396:1150597..1154525 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1150597..1154525 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgcgaggaagcagaggaatgcggctgtggctcctgtccgtggcggtgatggccatggcgatggcgacgaggtcgcaggcgcagctgcaggtcgggtactacgacacgctgtgcccggcggcggagatcatcgtgcaggaggaggtcagcaaggcggtgtccgggaaccccggcatggccgccggcctcgtccgtctccacttccacgactgcttcgtcagggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgcccccgaacacgagcctccgcggcttcgaggtcatcgacagcgccaagtcccgcctcgagacggcctgcttcggcgtcgtctcctgcgccgacgtcctcgccttcgccgcccgggacgccctcgcgctggtgggagggaacgcgtaccaggtgccgggggggaggagagacggcaacgtgtcggtggcgcaggagacgaacgggaacctgccgccgccgtcggcgaacgtggcgcagctgaaccagatgttcggcgccaaggggctcacccaggcggaaatggtggcactgtcgggcgcgcacaccatcggcgtgtcgcactgcagctccttcagcaaccgcctctactcgtcgggccccaacgccgggcaggaccccagcatggaccccagctacgtcgccgcgctgacgacgcagtgcccgcagcagcaggggcagcccgcggcggggatggtgcccatggacgccgtcacgcccaacgcctttgacaccaactactacgccgccattgtcgctaaccggggattgctcagctccgaccaggcgctcctcgccgaccagaccaccgccgcgcaggtcgtcggctacaccaacaacccggactcgttccagaccgacttcgccgccgccatggtcaagatgggctccatcggcgtgctcaccggcaacgccggcaccatcaggacaaactgcagggtggccagctga</cdnaseq>

Protein Sequence

<aaseq>MEARGSRGMRLWLLSVAVMAMAMATRSQAQLQVGYYDTLCPAAE IIVQEEVSKAVSGNPGMAAGLVRLHFHDCFVRGCDASVLLDSTQGNRAEKDAPPNTSL RGFEVIDSAKSRLETACFGVVSCADVLAFAARDALALVGGNAYQVPGGRRDGNVSVAQ ETNGNLPPPSANVAQLNQMFGAKGLTQAEMVALSGAHTIGVSHCSSFSNRLYSSGPNA GQDPSMDPSYVAALTTQCPQQQGQPAAGMVPMDAVTPNAFDTNYYAAIVANRGLLSSD QALLADQTTAAQVVGYTNNPDSFQTDFAAAMVKMGSIGVLTGNAGTIRTNCRVAS</aaseq>

Gene Sequence

<dnaseqindica>3004..3582#990..1178#162..389#accatccttaaccgagaagcatagctcgcttccacgcaagattaaaagctgcccctcttgctgctgcagactgcagtcctgcaagatcagcgcctgaagcaagaagcgaagaatcaaacgagagcctagcagcgtagcagatcgatcgatcgatcgatattatggaggcgcgaggaagcagaggaatgcggctgtggctcctgtccgtggcggtgatggccatggcgatggcgacgaggtcgcaggcgcagctgcaggtcgggtactacgacacgctgtgcccggcggcggagatcatcgtgcaggaggaggtcagcaaggcggtgtccgggaaccccggcatggccgccggcctcgtccgtctccacttccacgactgcttcgtcagggtcagtacagtaactaatagtaacttattacaccaccaaattcggttcctccattaatgagaccacgtatactagcttgttggggatgtgaagctaattaagctagagatagatgcctttgcaaagttgcaactgcatatatgcggcggctgcacatacaagtgtttttttgagtgatccaatggttgcaacgtgatgtcactgtggggatgtgcttcgcttgcatatggagcctctgcatctcttttgccgcgcaccctgctctgcttcgtccgtttctcgcgtatgtagtactgtacttaattttactgcgaggatgataagccgatcgaggtaggggaataatgcacgcacggtagattgctgcaccgtgtctgcacctgcacggaacgatgggatactctggaaccatgacagctagaaatcgctcgttcatgtttgccatctggcatcccctgttttatcctagcatccaaaacattagtacagtgctacagtcaatcaatcaagcacgtagtacctgtgttacctaatttactgcattcgttttgacatgtggtgcacgtaatagcgagacacctgaattccttgtggatgcaggggtgcgacgcgtcggtgctgctggactcgacgcaggggaacagggcggagaaggacgcgcccccgaacacgagcctccgcggcttcgaggtcatcgacagcgccaagtcccgcctcgagacggcctgcttcggcgtcgtctcctgcgccgacgtcctcgccttcgccgcccgggacgccctcgcgctggtacgtacgttttcttctgctccattgaattaccagctgcttcctccggcgcatcactgctagtgcttgctacttgcccgtgcgggtacaagtcgggggggatcacaacgcgcacggcgcacggttgattcgtcggtggattgggtgatttgcgagtgatagatagatagatcgagcctggaatataaaaccggtcgggccctacacggattgccccaactttcgttctatctttctccaaaagctgacgctgaaagtagttgtactccgactggcagtaggaacttactctgttcttctcctttccgatcgatgctgccggcccgacccggcgtagaatgggaggtgattcattgccgatgcttttctggaagcaacgcaccacggcggcatcacgcacgatatgtgccgatgccgcgatgcgactgcaggagaagcagaggccgctctttttcttttgttttggttggttcacgtataatgagcccgttgtctgcacggacccaccggtcggtgtccgtatcagcgtcacatggccgtgtcgccctcacacaggttaaggaaaagagagcctttgctttccaaaatcgatcatcttttggggatgcgccaaaagaatggagattaagtaatccaatctgatcgtgggatcatggcacttggcacactaataaagttcactttaaccctctgggggtgatgaacagttattttaggaggctggtgtgatgggccaactccaatcattcctaatctagctttgctccgatctccatgcaaacaaatcgtaaactgtatcgccatgcaattcagtgtagaaggaagttgagacatcgatcggagcaaaattatggagtactagtactagtacgttcgtatgattatattgattcagttggactaaatttgattattactgacgccacaacggtaaagtaggagcattacgacatgatatatacggtcagcaggtttagaaccattttttgtgttacatgtgttttttaaatgaacattactgatcatacgaccgttgcagtttcatattgttcaagttgacatattctgaacaagtagtcaaagattcctcactagtggtaagtcaatggagtatacagtatataccaccacgtcaataattcacaaccgaccaaatgcatgtattttccaaatagacactagcatatttatcaatttatgaactccaaatggtgctctgttaagaccgttatactgaaacttcagctggagctggaaacaacacatagatgatgcgtatgcgtgtgcataacctttcacatcatcacatgatgaaaaagacatatacctgcaaaaagcaacgctagtgagtagtgacgactccagccctctccggtatcaatcaggattacattaggggataaccaaagaggaaattaaataccgaaagctacgaggaggggtttaattctgggggcaggatgagcaagtgggacggatagtttacgtggattcgtctcacgcccatgtggccggcacgcccatcggtccacaacaccacatgccatggatcgatcggtttagtttgtccccattccctcccgttgtgcggcccatgcgtccccccgccgcttcaccaccaacccaatcaaccatgtgccgcgtctaactaactcgagaacacaaaccactgtacggtttccatccctaatctacatgtttccgtgtatcacatggatataggtacaccgctgatgcacgagccaagatgacagcagctaaaattatacttttagtacagtttttgagaaacagagtaacaattggcgtgcgtgtgtacgtgcaggtgggagggaacgcgtaccaggtgccgggggggaggagagacggcaacgtgtcggtggcgcaggagacgaacgggaacctgccgccgccgtcggcgaacgtggcgcagctgaaccagatgttcggcgccaaggggctcacccaggcggaaatggtggcactgtcgggcgcgcacaccatcggcgtgtcgcactgcagctccttcagcaaccgcctctactcgtcgggccccaacgccgggcaggaccccagcatggaccccagctacgtcgccgcgctgacgacgcagtgcccgcagcagcaggggcagcccgcggcggggatggtgcccatggacgccgtcacgcccaacgcctttgacaccaactactacgccgccattgtcgctaaccggggattgctcagctccgaccaggcgctcctcgccgaccagaccaccgccgcgcaggtcgtcggctacaccaacaacccggactcgttccagaccgacttcgccgccgccatggtcaagatgggctccatcggcgtgctcaccggcaacgccggcaccatcaggacaaactgcagggtggccagctgatcgatcgacctaagcatgatgtatagctcgtggcaggcttgtgtgagttgggattgtgatgagattaaattgaaaattgtacgtacgacgacgtagctagctagatagagtgttgtaaacttatttgtttgatcattcatttggtctctctgtattacgtgctagctagctcaattagcttgctcgtgcgtcccttctcccctcttcccgtagattattttactctgcactctgtacttctctgtgacattatagtgacaatatagttttattgttccatcttttaacctctgcatgtacatgctgcgaatagaaagccagaataagaaacctatttaagctccaac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0121200, RefSeq:Os03g0121200