Os03g0122000

From RiceWiki
Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0122000| Description = Protein kinase-like domain containing protein| Version = NM_001055332.1 GI:115450392 GeneID:4331441| Length = 6178 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0122000

Description

Protein kinase-like domain containing protein

Version

NM_001055332.1 GI:115450392 GeneID:4331441

Length

6178 bp

Definition

Oryza sativa Japonica Group Os03g0122000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1190028..1196205

Sequence Coding Region

1190074..1190361,1190482..1190605,1190727..1190785,1191229..1191293,1191502..1191595
,1191669..1191749,1191840..1191951,1192613..1192700,1193104..1193225
,1193300..1193637,1194243..1194534,1194610..1194680,1195646..1195870

Expression

GEO Profiles:Os03g0122000

Genome Context

<gbrowseImage1> name=NC_008396:1190028..1196205 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1190028..1196205 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgatggctgcggcgccggcgaggtcggcgggggcggcggcggagaagaggatggtggatccgccgcgggtggtcggggagtacaagctgctggaggagattggggtgggctcgttcgcgaaggtgtacctcgcgacgcacctccgcaccggcgatgtcgtggcggtgaaggagatcgaccccaggaggatcgacgagcgcgtccgcggcggaatcctcgaggagaaggccatcctctccaccctttcccaccccaacatccttcgcctcatcgacaccatccaggaggagaatctgtacctgattctggagtactgcaatggaggcgacctcgaggggtacaggacgaagggcggcgaggacgcccggttgccggacgccaccgcgagggacttcatgcggcagctcgcggaagggctcaagatgctgaggggaagatcaatcgtgcaccgcgacctcaagcctcagaatcttctgctatcaactaatggtgatgccatcacactgaaaattggagattttgggtttgctaggtctcttgtgcaagaaaatttagctgctacaatgtgtggatctccatcctatatggcgccagaaattatgcgatgtgaggattacgatgcaaaggcagacttgtggagtgttggtgttattctttttcagctagtcacagggaaattgcctttttatggggctaatctattcaagctgaggcaaaacatccatgaatctaacggcgttaagttccctaaagaaatcaaggatgatttacatcctgatttcattgacctgtgccgagggctcctacgtcttgatccaaagaagagaatttcttttgaggaattcttcaatcacaagtttttgtcaacaactgggtcgaccctttactctggtggaagcattcaaaggaaaagagagattagcagtgagcccaatcatcctgctgatttattaagggatacatgccagatcatttcttcggatgtcctgaaagataagtctgaaagcgtggattctagaaatttgcaagcatttgattcatgggaatggattgaacgagaatatgtacttgttcaggcgaactctacttccacggaaattttgtcttcacttgaaaagtcaatgaaggatggtacaggtgcaaaacctgccagctatgataggtccactgttaaacggtctgcttggaaccaaaacagaaattcagtcagtagaggggttgctataaaaagcaatggatgcaccccattgtctacttcccatgaatcaacagctgcagaaaatctgctaaatccaccttattgttacacaaggcttcaactccttaaccagtatattgttgttcttacagaacttgcagaggagaagctttttaaagggctggacttggaggcactatctgttgaacttataatattagctatttggaacgaggcccttaatgcatgtagtttatccacggatgctacacatgatggattttttttgacccaagctcatgtcaatttcctgcctaagaatgaccatcgtccatctcgaaatgtagtacaaggattggatttcaccaggctcgtttctgtctgttcctgggctgaaagtggctttatcaaggcatatgaccgtgcagagaagatatcacataggttgcgggacaacaatgataacaccgagatgccagatgcagtggagatcatattccagacagctttaatatatggaacaactggtgctgcaaaggaagttttgggataccaaaatagatcggtggcgctatactcaaaagcaatcatcttgctcacatttgtattgcaagaagcaactaatttgccactgaatccgccgttttccctttcatcatctgatcagcaacgtatccataggtacatagctaatttgaggagccatctatgcagtgcccagctgaccggacaacaggagagatatgtccagaactaa</cdnaseq>

Protein Sequence

<aaseq>MTMAAAPARSAGAAAEKRMVDPPRVVGEYKLLEEIGVGSFAKVY LATHLRTGDVVAVKEIDPRRIDERVRGGILEEKAILSTLSHPNILRLIDTIQEENLYL ILEYCNGGDLEGYRTKGGEDARLPDATARDFMRQLAEGLKMLRGRSIVHRDLKPQNLL LSTNGDAITLKIGDFGFARSLVQENLAATMCGSPSYMAPEIMRCEDYDAKADLWSVGV ILFQLVTGKLPFYGANLFKLRQNIHESNGVKFPKEIKDDLHPDFIDLCRGLLRLDPKK RISFEEFFNHKFLSTTGSTLYSGGSIQRKREISSEPNHPADLLRDTCQIISSDVLKDK SESVDSRNLQAFDSWEWIEREYVLVQANSTSTEILSSLEKSMKDGTGAKPASYDRSTV KRSAWNQNRNSVSRGVAIKSNGCTPLSTSHESTAAENLLNPPYCYTRLQLLNQYIVVL TELAEEKLFKGLDLEALSVELIILAIWNEALNACSLSTDATHDGFFLTQAHVNFLPKN DHRPSRNVVQGLDFTRLVSVCSWAESGFIKAYDRAEKISHRLRDNNDNTEMPDAVEII FQTALIYGTTGAAKEVLGYQNRSVALYSKAIILLTFVLQEATNLPLNPPFSLSSSDQQ RIHRYIANLRSHLCSAQLTGQQERYVQN</aaseq>

Gene Sequence

<dnaseqindica>47..334#455..578#700..758#1202..1266#1475..1568#1642..1722#1813..1924#2586..2673#3077..3198#3273..3610#4216..4507#4583..4653#5619..5843#aatccaaactgtttctcggcttccgctacacgcctcgccgaccaccatgacgatggctgcggcgccggcgaggtcggcgggggcggcggcggagaagaggatggtggatccgccgcgggtggtcggggagtacaagctgctggaggagattggggtgggctcgttcgcgaaggtgtacctcgcgacgcacctccgcaccggcgatgtcgtggcggtgaaggagatcgaccccaggaggatcgacgagcgcgtccgcggcggaatcctcgaggagaaggccatcctctccaccctttcccaccccaacatccttcgcctcatcgacaccatccaggtagtaacccctaaaccttccaacccaggcacccaaccgccatcgcaatcgcaactgaactccgagcgagtagtaaggttaacgatgtgaaattagtaaaatgacttgtggttttcaaaggaggagaatctgtacctgattctggagtactgcaatggaggcgacctcgaggggtacaggacgaagggcggcgaggacgcccggttgccggacgccaccgcgagggacttcatgcggcagctcggtatggcctcaatcgagatttgaatggagttccttgtcctttagttgttgtcttagttacattttctaggtttttggaacggtgtagttatgcgtcttttgcccctcttttttatttgtagcggaagggctcaagatgctgaggggaagatcaatcgtgcaccgcgacctcaagcctcaggttagatcttacatgcggagctattaaatttttgctgtttgagtcggtttgcaatttttagatgttttgtttggataccatatgcaaactaactgtaatgattatgtctgaagttaagacgttttgtaatttcttgtactgttgtgcaaatgggctccatatttagcatctaaagtgatcaatacctaacaactaatattgacttgattgggctgaccccagtcattattagttcaccaccaaatgtcaaaaagttgcatgtacgatttctctatacgttcatgctattatccactcagtaactcaatatatgtttgaggaaaaaaaacccaaaaaggtgtacattgtaatagtgtccatgtgtttatttttggctattgatttgttttatcctttgagataatatatttttacccataccgaccaatatgtgaaacttgcagaatcttctgctatcaactaatggtgatgccatcacactgaaaattggagattttgggtttgctaggtgtgggctctatttcccttctgttgtatatatatttgtaggcttatatattttttctcctttacttgaattaccgggggccaatccccaaatatctacagctgttacccattttccaatttctacagtttcttccctttttccgaaggttactatgaactttttgttagtaaacaatgtgtgaatgatattttggaattgttcccaggtctcttgtgcaagaaaatttagctgctacaatgtgtggatctccatcctatatggcgccagaaattatgcgatgtgaggattacgatgcaaaggtttgttcattcacctatgcttttgggtgttttaatatagctagacaataatcccaaccatatgttctttcaggcagacttgtggagtgttggtgttattctttttcagctagtcacagggaaattgcctttttatggggctaatctattcaaggtttgctcttatgcataattagatgtatgtggaccataaaaatacatatatcctgtaatattgttcttgattgttgttctttgaatatagctgaggcaaaacatccatgaatctaacggcgttaagttccctaaagaaatcaaggatgatttacatcctgatttcattgacctgtgccgagggctcctacgtcttgatccaagtaagtttgtatttctcttcatttttgtttgtgcaaagcagtgtgtattaactactccctccgtcccataatataagggattttgagtttttgtttgcactgtttgaccactcgtcttattcaaaaaaaataaacttgaatagttatgcactgtagtagattttttaggcatattcactctgaattaaaaaagtcttcaacattaaactttgacaatcaatttctcataaatataagtatttttttccatagcttatgaaattaagataatgcggaagcaactctgggatatgaatttattggtattattcttgtactgcattgcttagaccacttgttctaagctacgtagtatttgttaagtttatttctcaaaatgtttaatttatccttataatgaagtatataatctgcggtcaataatctatctcaattctcaaatggagcctacacttgtaattggactaactgtttgtcaaaacgaacacagtttgatttttttaaaataaaaatatgccttataaaaattaatggaaggaacaatttctttcaagtttcaactgtcatctgtgtaatttcgttaatcattggtcttgatcttattattccttactaattactaattggtgaatcatattaaaacacaatttctattttgcagagaagagaatttcttttgaggaattcttcaatcacaagtttttgtcaacaactgggtcgaccctttactctggtggaagcattcaaaggtctatctggctatgttgcaaaatgtgcattgttatcataatccatgtccatacctaatcttcaatttaacttaaccaaatactactctgctgctgccaatacggcattcatcctcacttgtaggcagcccaaaaaatgtacataaagagacatacatgcattgccttcaacataatataaacctctaaaatttcaagatgaattgaacatatgatatttggaatggtacattgtacatttctcaagttctcatgaatggtgaattactcaatatacagcatacttgcagtcttttcccatactctccatgtatttgtggaatagttgccataataatgtggacatgggtttgattgtgtcatatttgtctcctgtgttgaagttttctgattctttttccaggaaaagagagattagcagtgagcccaatcatcctgctgatttattaagggatacatgccagatcatttcttcggatgtcctgaaagataagtctgaaagcgtggattctagaaatttgcaaggtaaattagactcccaactagtattcagatttcatacgtccctgctctggcattaactctgtatatttttgcagcatttgattcatgggaatggattgaacgagaatatgtacttgttcaggcgaactctacttccacggaaattttgtcttcacttgaaaagtcaatgaaggatggtacaggtgcaaaacctgccagctatgataggtccactgttaaacggtctgcttggaaccaaaacagaaattcagtcagtagaggggttgctataaaaagcaatggatgcaccccattgtctacttcccatgaatcaacagctgcagaaaatctgctaaatccaccttattgttacacaaggcttcaactccttaaccagtatattgttgttcttacagaacttgcagaggagaaggtattactactgcttttactgggatataacactatgtccattgaatgccatctgtgttttgtagttgtgtgcagtctgtagctccttatgtttgttatgatgaaacagtggttttttgttgctaagcttcatctgctcatatacttactatgttccttgctagaatgcttgttgagttctttgaccagatgaatgtttgtagagttatccctagtaatttaaatcatgcaggtgatgtctaggtttaaatgattttcatcagatgtagaggtcacagccttccacatgccatttttcattgatatacccgtgtatcaacacattaagcaatactcttagtctccaagtcatgatatttctggcatatctcttcttctcagttttttttaacataaagctttgtccatatatatattgtatagcatcaaatagatgaatcttttgtgcacttctcttcagaatgtcgatgccagacaaaattctccttttgtattgatgctcatagcatagctatgatattttgagaattgagaacctattagtccagtttgatctaagaattatgttttgttgtttttcatattggcatttctgtgtggatgcagctttttaaagggctggacttggaggcactatctgttgaacttataatattagctatttggaacgaggcccttaatgcatgtagtttatccacggatgctacacatgatggattttttttgacccaagctcatgtcaatttcctgcctaagaatgaccatcgtccatctcgaaatgtagtacaaggattggatttcaccaggctcgtttctgtctgttcctgggctgaaagtggctttatcaaggcatatgaccgtgcagagaagatatcacataggttgcgggacaacaatggttagaacattggtatcttcatgtcctagtatagttttgtttttgttttttgctataacccttgtttgtttccagataacaccgagatgccagatgcagtggagatcatattccagacagctttaatatatggaacaactggtgctgtaagtatcagtattctaggttcttgtatggtttctttacagctttcgtttttccttgcacttcatggatttggggggaaagtgggggagtggtgtatgcatttcacgattttgggtaacaagcaatgatgctacaacggaaaggaaacctgtagacttgtagttaatgtgtaccagcccaggatccaccgctgtgcactggttgtccaggcggttggttagttattatcactccatattctgttagaccacgaacaaggggcagaaatgaatactattgttttaggctgtgtttgagggagagggaattgagaagattgggaagatacgcaaaacgaggtgagccattagcacatgattaattgagtattaactattttaaacttcaaaaatggactaatatgattttttaaagcaacttttctatagaaaatttttgcaaaaaatacaccgtttagtagtttgaaaagcgtgcgcgcgaaaaacgagatacaatctcccctttctcatgtgaacaaacgcagccttagactgcagtgggaaagaaaaacaactttcttttacaaatgagcaaaaatgtttatagccagccagtctctgctctctacttctattaaagcgctattcatgggggaaagcggtattcatggggaaaaaacttttatgaaagcactccaatcatgagttcaagacccttgctactctttttcctccatctgttttattttctggccaatacttaatcctgcccttgtaaacagtttgtaacattttgatgatagtaatatattcatatgggctggccttaggccttagccctctgtgaatccttcaaaaaatagcccccgtcattccctagctggggaactcttaccatctttcataaaccctacttctaaaagttctccaacatgtttcttcacttagagctgatgtttataattcgtttgtgtataccttttcaggcaaaggaagttttgggataccaaaatagatcggtggcgctatactcaaaagcaatcatcttgctcacatttgtattgcaagaagcaactaatttgccactgaatccgccgttttccctttcatcatctgatcagcaacgtatccataggtacatagctaatttgaggagccatctatgcagtgcccagctgaccggacaacaggagagatatgtccagaactaacttttacatgggaaatattggtgcacaaagaagtgaaagttaaattgattccgtggtaaacttcaagcaagctttgttttgttccccacgagtattagtctttgcctccaacttttttttgtctaggagatgcttacttgggggaacttttgtaatgttttgtttgcatgatcatagtccatgtgttctttttgtatataatatataataacacttctaagttgtacagttatttgccatagaactgaaatgacctcttggctctgtatataagtagcatgtaaaaagagcaaatagttttttatttttccaagtcttaaaactgctttgcctac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0122000, RefSeq:Os03g0122000