Os03g0122300

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Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0122300| Description = Similar to Flavanone 3-hydroxylase-like protein| Version = NM_001055334.1 GI:115450396 GeneID:4331443| Length = 9473...")
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Gene Name

Os03g0122300

Description

Similar to Flavanone 3-hydroxylase-like protein

Version

NM_001055334.1 GI:115450396 GeneID:4331443

Length

9473 bp

Definition

Oryza sativa Japonica Group Os03g0122300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1213807..1223279

Sequence Coding Region

1214032..1214292,1215318..1215642,1222691..1222938,1223055..1223249

Expression

GEO Profiles:Os03g0122300

Genome Context

<gbrowseImage1> name=NC_008396:1213807..1223279 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1213807..1223279 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaccagctcatctccacggcagaccacgacacgctgccgggcaactacgtgcgccccgaggcgcagcgcccgcgcctcgccgacgtgctctccgacgcctccatccccgtcgtcgacctcgccaaccccgaccgcgccaagctcgtctcccaggtcggcgccgcctgccgctcccacggcttcttccaggtgctcaaccatggggtgccagtggagctgacactgtcggtgctggcggtggcgcacgacttcttccggctgccggcggaggagaaggccaagctctactccgacgacccggccaagaagatccgcctctccaccagcttcaacgtccgcaaggagaccgtgcacaactggcgcgactacctccgcctccactgctacccgcttcaccgctacctccctgattggccatccaaccccccttccttcagggagatcataagcacatactgcaaagaagttcgggagctcggattcagactgtacggagcgatatccgagagcctgggcttggaacaggactacatcaagaaggttcttggtgagcaggagcagcatatggcggtgaacttctaccccaagtgcccggagccagagctgacgttcggactgccggcgcacaccgacccgaacgccctcaccatcctcctcatggaccagcaggtggccggcctgcaagttctcaaggaaggcaggtggatcgccgtgaatccacagcccaacgcgctggtgatcaacattggtgatcagctacaggcgctaagcaacggaagatacaagagcgtgtggcaccgtgctgtcgtcaactctgacaaagcgaggatgtccgtcgcatcgttcctgtgcccctgcaacgacgtgctcatcggcccagctcagaagctcatcaccgatggctccccggccgtctaccggaactacacctacgacgagtactacaagaagttctggagcagaaacctcgaccaagaacactgcttggagctcttcagaacaacacctacagacacatcttga</cdnaseq>

Protein Sequence

<aaseq>MADQLISTADHDTLPGNYVRPEAQRPRLADVLSDASIPVVDLAN PDRAKLVSQVGAACRSHGFFQVLNHGVPVELTLSVLAVAHDFFRLPAEEKAKLYSDDP AKKIRLSTSFNVRKETVHNWRDYLRLHCYPLHRYLPDWPSNPPSFREIISTYCKEVRE LGFRLYGAISESLGLEQDYIKKVLGEQEQHMAVNFYPKCPEPELTFGLPAHTDPNALT ILLMDQQVAGLQVLKEGRWIAVNPQPNALVINIGDQLQALSNGRYKSVWHRAVVNSDK ARMSVASFLCPCNDVLIGPAQKLITDGSPAVYRNYTYDEYYKKFWSRNLDQEHCLELF RTTPTDTS</aaseq>

Gene Sequence

<dnaseqindica>8988..9248#7638..7962#342..589#31..225#gcgtgccaagttgtgtgtgtgtaccgcggcatggcggaccagctcatctccacggcagaccacgacacgctgccgggcaactacgtgcgccccgaggcgcagcgcccgcgcctcgccgacgtgctctccgacgcctccatccccgtcgtcgacctcgccaaccccgaccgcgccaagctcgtctcccaggtcggcgccgcctgccgctcccacggcttcttccaggtataataaatcactagcactactacctacgttactacatcgtccatctcgtataagcaggtctcacacatgttggatgttgctgttgcatgcaatcgatcgatggagttgatcaggtgctcaaccatggggtgccagtggagctgacactgtcggtgctggcggtggcgcacgacttcttccggctgccggcggaggagaaggccaagctctactccgacgacccggccaagaagatccgcctctccaccagcttcaacgtccgcaaggagaccgtgcacaactggcgcgactacctccgcctccactgctacccgcttcaccgctacctccctgattggccatccaaccccccttccttcaggttactccacttttcctgccttctctactactcctattccaagtactccaaagaccatttcttgctcatctcaaaagactctgcaagtcagtcatcactgctccatcttcgctttggtattgaaagaaacaacaggacagacgaatagctagcttggacggctggtgaaattactccatgcaggccgtgtctagttctttacacaattttttttaagtatacaaaacaaattacaaattccgcctgtaaactgttagataaatttattaagcctaattaatctgtcattaataaatatttaatgtagcatcacatcgtcaaatcataacgcaattaggctcaaaagattcatctcgtaatttacatgcaaactgtgcaattgtttttttcgtccacatttaatgctctatacatgtgtccagacatttgatgtgatatttttggcaaaagaaaaattagagatctaaacacgcccacaattacaagtggttacctttcccattcacaactcacaactcatgcacacagatgttaattccaagtccccacatgtttcagcgttgctttttttttccttagggaaacggagtttcttaaaataaaatgtttaatccttggaaaccaaagtaaaacgttgccattttcaagtttggtccataccccacggacagaaaagaactatagtacttgaccaatctttttcgctccttgcgtgatactgaacgatgtgtttcgaggtggtttgaaaatgccaggctaaccactctgaacagttcttggggaaaaaaaaccactctgaacctgaacgactctagctgtgggctgtggctaccatgtgccagagagacagggctccattctaaacaaattccgggacaaacagaccttttgctttcatgaaagataacaaagagttatcacagattcattgtaccctcctcttcaatgtttagttttttttgatggaggaagtactcctatccaatactccaacaaaccacggctccacgtttatcatgtttcattactcattagcttgcagtagaatgaacaaaatattgtctccgttttcttttacttattgttagacatcgataatctttaatgtacatattttatcactaccttttctaattttattttcataaaaactattaaaaataagtaccatgacggtgatccttactaattagtattctaatattggcattatcaccataggctgtgtttgtttgggggttgggaacctttctcctggcacgtaaaatggaggaacggattagcacataattaataaagcattagctaaaaacttgataagtggattaatatgatttttaaaagaacttttctatattagatttttttaaaaaaacgtatggtttagcagtttagaaagcttgcacatgaaaaatgagggaatggaagttgaaaaggtgtattatagaacacagccttagaattgattttaaccattgatttatgagttctattatgagtagaaacaattattatactactgtcacgccccgaactagtcccgaccggaactagcccgtgacgctccaaattaacctgttaatcgataccagtcccaggaaacagtgctggtatcacaggaagacagaatatcacagcaacaaaggtctctttattatagagtagaggtacagtcatgttgggctgcggacagatcccaagctcacaactgcattgcaaaaagggaaacggaagccaagacttggaccaaacaacacaggcgcgacttgggaattaggccgaaaccctaaaactcatcgtagccggtttgctcctggaagaactcctcgtcagcgggatccgcttcatcttcttcagcaactgggggggattatttatatagagcaagggtgagtacgggagtactcagcaagccatgggaaataagtgtttaatgcaggcttcaaggaaaggctgttgtttttgcaattgattttatttgaactcttttctgaaaacaactaagtgagtgcttctcaaacgacacggatgagacagtgcgtctcgtccggtcggagtatgtgcaatgtatcagtctttagaattgttcaagattggcacctggccatcaactttcaaacggccacccgggccaacaactttcaaacggccacccgggcctagctgatcccatcagctgcagattttccaaacatcgattccccttttcacaacagcaatttcacaaggcagtagtcaaacaaaactacgctaggaatcacctcacatccgcccatgaccatgggcacggctgttcgaacagtttgttaacctctgcagagggggtacactttacccacacgacattactaacccggatcacccaacccgtggggatcagccacgtcgggagatctccaagctttcatgacaaggcatttccaaagccgacacaggtttaccatatgccgacgagaggggtcccagaccaacaacaggttaggtcccagaccatactgtgccaggaagcccaggggtcctccccgacaccaccccggcgaatccacatgtctctcggcatcaaggctcccctgataaactagttactcagccaggggtgtcccattccacccatgtggtcgtacttgtcttatgttcggatgaaattccaaggaaacggtccttaagtgcaagagcgggaaaccgtacacccggtacgttccccggtccgtggttttggaaattcatttagttcgcaagcaccgacccaggtgtcgggttttccaagtcttttgtaaaacccaagttttacccaagaagttactcagattttaagtttgaaggcgaccgtcgatactcgcatagagtgcacgaatatcgaggcgcaactagatggttacaagggaacatggtataacaattaacaaaggaaggatcagatgcaacaaattaggtaggttcgccaatctgccttgcagacgggacaagcaaattaagtgcgatcctatcaatgcataatatttttttcaagcaacataattaagttcagatataggctcaagatgttcaaaggtggcttgccttgctcgagatcttgagcttgatcctcgaaatcctcgcactgcgggtcttcgggctccgaaactacacgcaaaacgggacaactcaacaaacggcgaaaataaagccctattaatgacctctaagcgtgccattagatagatctcgagatttgaggaattttggaagttgaacggagtcaaacggatttacggttgggaagatattgaatttctaagattattggatttttggtctaaaggaaaaaggatttatttaaatcctttttgaaaaagaaaaggaagagggaggggaagtagacttccctcgggcggctagggcgcggcccgagagaaaaggggcggctcggccgagctaaatgggccggccggcccaagaaggcggcccaaagcgcgcgcgcgggcggggaggggagagagagccggtgggccgggtccatcccgcgtggtcccgggtgggacccgcttgtcggtgacacggttcaccgtgcggaacgcgcacgcggcgcgcgctagggtttgggggagggacgcggtgcacgcgcgcggttcgcggaagatgcggtgcggcgggcccacgcgcagcctcacggctcaccgcggaccatgcgcacggggggggaacggagggagcggctggccgggtcagccgatccggtcgcggccgaggtggcgccgacatggcgcctaagtggcagccacgcgggccggcgggaggtagacgacgacgccggccggaacggacggcggacgacagcggcgggcggcggagcgaaccacggcgatacaggcgaaagcgagcacaccgggtggttgcacgagacgaggggagacgagccaacggcttggattcgccggagggagtgcgtcggcggcggattgcggcggcggcaaccggcggggagggaagagggaaacggcgacgaggtcacgaggggccgattcccggcggcgagagcatctacgcggctacgggaatccgtcccttgcgccggattaggaggaacgcatcgagggaggccggcgacgagaggcgcttccgagctcgggcggcgacggcggcgagcacacggcgagcgacggcagcagtcggggcggcgccagctagctacggggaggctactcgtgctactacccgagtctaagggaaggggatggaacgaggagggagaatagggagatgcgctaccgtgcgggacggggcgcagtgacgatgggccgacggcacgggagtgatctctccggcctcgggccggggaagaggaagaagagggcgcgcccggagtccccttccgcgtcctcgctcgtgccggctcctccgacacgcgcgacgacaaacggcgacggcgaacagagcacgggaggcggcgacaatggagtggaggcgatgggacaacgagaggagaagagagggagggcgcctgggctttataggatggcaatgacggtttgggagaggggaaccgactttggacggtcaagccagcgagctggcgctccggctagcggccaaatcggcgacagggcggagggaggatgacgccggcgggaggaaaaaagggaaaaggagggagagaaagggggcttgccccttgcctctttgggaaaaggaggagggagcgggggcgacgcggcagagggaggaggggctctgcctccgtcccttggaagctagcgcgcggagtggcggggtcgggttgatgacgacggcgatgacggcggggcggtttggagcggagcggcgacacggacggcaggcgcggacaggcgcggcagaggctgacggcagcggcgaccaggcggtcggccaccacggcacgcgcgcgcgggaagcaacgggcggcgcggcgatttgagcggcgcggctcgggcacgcgtgctgactcgcggcgcagacggcgcaggcgcggcacgggcggcgaccgcacgggcgcgtgcatgcgaacaacggcgcgcgggaagcagcagcgagggagcggagagggagggctcggctcggcgcggctcatgcgcacgcgcgcgcggcgcgcgggcagagcggagaagagggagggagagagagagagcgagagagagagatagccggggagggaggggaagatgggccgagagagattcggcccatcgaacccgagggaggaaaaataaacttttgcggagggatcgatttgggaaggtttggattcgggattgaactcgacgatagatcggggatttgagatctgagatggcacggacactaggcaacaagcaaagaaacagatttcgcaaatagagtttttaagagatagttttcccgctaggcgccacgacggaacgggcgctacaactactagtagttggttggtagtagaaatagatatgatctattggattagaataagatatacgatttagattggttctactatcggtaaaaaggattaaaaatataattatataaaagagatttccatgccaaatctaccaacaccattttctcatgttaaattttagtatttttgcatgaattaatcatttaagattcaaggtttgactgcacgcattctataatgctatttatttgagttagtgcaataattgaagtagcgggcttcaaaaattgccacatcaaatttgtgattaggtggagagatgatagaagatgagaataatagcggtgttatagatttgtagccagctatagcatgagttataagacatcgtgtgtagtaaatatttatgtgtaactattatatagatagactattagattagctgtagatgatgtgccaatttttgaagctaataatagatggctatactattatacttgctatttgagatcggaggtagtaaacaactactttctcagttttaaattatgagcatctctaggtttcttagtggagattaaagttgagaagaagagactctggcattaaaaatataattatatgaaagtgattttcatggcaaataagatttatgggtaggttaagcagagatgagaagagaggagatagagaagaaaagtgtgttacatatgtgtagctaacagtagcacgggctataagacggtgtgtgtagtatatatttgtgtgtaagtattgtatggatagagtattagattagctgtagatgatgtgccactttttgaaactaataattggctatattattacacttgttgtttgatattggagacagtagacaattgttctctccattttaaaatataaggatttctagattgtatagcaaagattaaagttgaggaggaaacactttggtgccccttgtgtaacaagaaacaacttgaggcaggaggtagttagagcctcttagaggtaagatgagatttaaaataaattattgatgggataagtagtattacaaatcatttttatatattgtaacaacatgaactagtgaggttgacctgtcatgctagcaatgccttttatgtctctgcactcatatactgtaagaggcaattttagcacagacatcgatcgaggaaacagaaagaaggttggagctactagtaagacaatgcaatgagaaccacatttttcccctactgaaaaagtcgcatcgcatcagtcatgtacacaatcacatgaagatcccaacatcagaaacgatgaagtggtcacgtgcatccatgcctagtgctgggatcatttcacctgctaagaatccactagtgtcggtttcgtaggacctcccttctcatcagtgcttggatggggatttcaatgggagctcattggagctcgttggtgtgatggtggatgactttatttcaaatcctgatatacataaatatggttgtgcacttgtgcgcattcttcgctcaggccgaaagttatcctttgtttatccaaaaacaaggtcgaacttaggaccagtaggacaaaagatcaagggaattaatcacgcattatctcctaagttaatccttatattattaaccataagatgaatttactttgacgatggtgcagggagatcataagcacatactgcaaagaagttcgggagctcggattcagactgtacggagcgatatccgagagcctgggcttggaacaggactacatcaagaaggttcttggtgagcaggagcagcatatggcggtgaacttctaccccaagtgcccggagccagagctgacgttcggactgccggcgcacaccgacccgaacgccctcaccatcctcctcatggaccagcaggtggccggcctgcaagttctcaaggaaggcaggtggatcgccgtgaatccacagcccaacgcgctggtgatcaacattggtgatcagctacaggtgatgcatatatcagtttcttttatcagagtatataatggactaggttaggtgttcagataacattgctgaaaatcttagtgcttgtttagttctcaactttttcttcaaacttccaacttttccatcacatcaaaactttcatacacacataaacttttaactttttttcttcaaacttccaattttagtcaaatttctaattttagcgtggaactaaacacagccttaaccatggcaattgaagctgttgtgtgttcaggtatagcttgttggtaaacgatcaggctaggtggcagacaatgctagtgcggcagaatatagttgggtcacctaggacaaacacttcttgttgcagaaaaaaaaaagacgagctgttgaccaacattataataactgtgataatagaaaaagaccaataaggacccctttttgatttgcaggacaggaaaaacacaagaatagaaaaaccgcaagaattagggtagtaacacttctcaaatcttacatgaatataaaaaacacaggaaaaacaatatgagtcttttgatagtgttatgggaaaaacaaaagaaaattacttcattgctatttttcctaagaaatatgaaacaagtaatacaatcttatagaaagtttcctttcttttctataatcaaagggacatgtaggaaaaaattcataggaatttaaattatatgaaaatacttggccagattctatcatttttatgaatcgaagaggccctaaacagccagatataatggattgagtatagtactaaaagatatcgataccgtgatacgtcgcacacagagatttttctctaggagtagataaatgaagattcttctatcggatgccaattgccatggtttatactttgcaaagagtagttaaatatttgcaggaaatctgaactgcaaagcactgaactgtattttttttattcagtaaatattttccaagtgttggttctgctctgcagcagaatttgtaacctctgtaacttccatatattgcaggcgctaagcaacggaagatacaagagcgtgtggcaccgtgctgtcgtcaactctgacaaagcgaggatgtccgtcgcatcgttcctgtgcccctgcaacgacgtgctcatcggcccagctcagaagctcatcaccgatggctccccggccgtctaccggaactacacctacgacgagtactacaagaagttctggagcagaaacctcgaccaagaacactgcttggagctcttcagaacaacacctacagacacatcttgaattcttgatctagtcgagaactggtttgtagtactcggttgtaggtgtaggtggtgtttgggagagggggtggtgtttgggagagagcccgacttattgttttgtgagaggatctcccaaacacccccgtagtttctcggttgaagttgtttgtagtactcggttgtaggtgtactggaacgagccgttggaatgagtaatcaatcaaatcaatcggtgcaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0122300, RefSeq:Os03g0122300