Os03g0123100

From RiceWiki
Revision as of 12:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0123100| Description = Similar to SUMO E2 conjugating enzyme SCE1| Version = NM_001055337.1 GI:115450402 GeneID:4331446| Length = 3372 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0123100

Description

Similar to SUMO E2 conjugating enzyme SCE1

Version

NM_001055337.1 GI:115450402 GeneID:4331446

Length

3372 bp

Definition

Oryza sativa Japonica Group Os03g0123100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1296615..1299986

Sequence Coding Region

1296666..1296734,1296845..1296928,1299018..1299170,1299253..1299366,1299478..1299540

Expression

GEO Profiles:Os03g0123100

Genome Context

<gbrowseImage1> name=NC_008396:1296615..1299986 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1296615..1299986 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccacccacacggtttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctggcactgcacaatccccggcaagcaagggactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctagcaaacctcccaagtgcaagttcccacagggtttcttccacccaaatgtctatccttcagggacagtctgcctttcaattcttaatgaagacagcggttggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttgatcagcctaatcctgctgatcctgctcagaccgatggttaccatctttttatccaggatcctacggaatacaagaggcgtgttcggctgcaggccaagcagtatcctccgattgtctga</cdnaseq>

Protein Sequence

<aaseq>MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHC TIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDS GWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV </aaseq>

Gene Sequence

<dnaseqindica>52..120#231..314#2404..2556#2639..2752#2864..2926#aaacccccaccgccggaggaaggaggagacgccgccgccgccgccgcagccatgtcggggggaatcgcgcgcggccgcctcgcggaggagcggaaggcgtggcggaagaaccacccacacgtcggtgcctctcgatctcaacgcctcccctctttttttttttaatcccttttacatgtcgcgccgcggggcttgatccccctgatctgtgttctgatttggttccgtagggtttcgtcgccaagccggagacgttggccgacgggacggtcaacctcatgatctggcactgcacaatccccggcaagcaaggggtaagcatcgccctgaatgctacactgaatttaatagtaagagtacaacttgaaattcgagaggcctctctggttctcgtccgattctgaaccaggatggtttcgatggttatcccgttagctatccactgtgttatcagatggatctcttcaggcggagattatttcagtgccatctccctcttgttttgggagatcggaattagggattgtgctgtagtacatttgttgccatggcctgggtttgaggtgtggtgcttttgtgccgcgaaaagactgtcttttttttgggctagccaaactgttttcaccatagatcgaagttgagttctggttcactgtcagtcaccaagcttttgcatgatgtgcttacatgctttaaaaccagtcttcatttcagcaactactgcaaaccgtaggtagaagggagtattgcctcaaatgatatatcaaagggtgaaaccagtcttcatttcagcaagacagcaactaccataggatgaagggagtattgccccgaatgatatataaaaagatggactgggcattaaaatcaagtgcacacataaattcggttgaattatacacgtgggcttctgcaagttcttatcatttactaggccaaataagcgagtagaatgtcatgaaaaagataatactactcagtaggtctggattaacactatttcatatttgttgcgggttctcttttatggtcagattcagctttgacaaaagacaacaaagaggaatagtgattgcgtgtgtcatgtgcgtgcatgagggaccatgtgcagtctctccttcaggagtttgaccaagttaggagtccttgagatagaatagctcgatttcttgttggctcagtttggtctagaagaagtttgaacaaactagagagcatttgagcaggaattgctgacatttatctagccttttaaaagtggcatgcgtagtactacctccgtacactaaaggatgacgctttaatgttgggcacagagaacagcacagtttaactgctgaggaaaatagaaaaaaattgccccttcattagtattactaatagctcatgctccataaataatgataataataaatgttcatgcattctaatccaatgacccacaagagtgcattggcattgattagtgcaagcaccagtttgccacgagtggatgtgagcgaacgctaggccatgcgaatctccgatcaaaatattatggcttccttagatttcaattagatacaccaaacgctctcttgaattaatccaaagtttggccttatagctcccctttttagggtagcggtgaccggtgatattggaaaaatgttgcctaaaaaatctaaaacatcatctactgaagaacaaaatcaaaatcctaaaacatcacataaaagggcaggggtaataacattttgaacttgttagcacaccctcaggccttgctctgcacattagttgtgatgtgagccaagtttcacattattcaagctaacacgatctcttacaaaacatcaccatccagagattttcatatctttacatgtattaccactgtctggtaacattatcttagtgttttagaaaatatatgaaacccagtaagttcctggcaacctaggctgtcctgccatttgtaggtgctttggtgtgatttaggatatattaatgttccttctatctgaagcaaatataaattaagactttgaaacatgtccatatttacgtgttacagctttttttaatactcagaatcctttgaaacatgtccttggtggtgtaacacagtaatatatatttttttcctgaaaagacttattttttctgttaacaaacaaaattgtttgcttttacttcatcagtcttctatatttctaacgtgttgattgatgttatgctttgaattcttgcacatggtcagcttatatgttactttctcaagcttgtcatactttacaaaactacattcttatattgcttctctgttcatgtagagaagtgtttgtaaaaaggcattgcagctagaagcctataactaatgcacatctctctctctctctctctctctctctcttttggcagactgattgggaaggtggatactttcctctcactcttcatttcagtgaggattaccctagcaaacctcccaagtgcaagttcccacagggtttcttccacccaaatgtctatccttcagggacagtctgcctttcaattcttaatgaagacagcgtaagctttacaagcatttattaggtttttagcaatcccaatttagatatcatttataactgttctgattttctgctttcagggttggagacctgctattaccgtcaagcaaattcttgttggaatccaggacttgcttgatcagcctaatcctgctgatcctgctcagaccgatggttaccatctttttatccaggttagccatcagtaaaaagtgaccaatcagggttctgctaatttttactataaatcaataatgctaagatattcaagctttgtagttttaatgtgctctttgggtttgcaggatcctacggaatacaagaggcgtgttcggctgcaggccaagcagtatcctccgattgtctgagaatattggcatagggacccatgctgcacattcgcttagttcttgctagatctaaaatgagtgcctctgcaaatatggattagaccaaaatatgacctggaaaaagggtgctttcggagtttgagaagtattatcatcgttgtggactaatgtcttgtgagatccgtcttggatgtaaacggttttcttaactgtgatttttcaaccgtttgagtgcttgctttatgggataatgtcaaacattggtttggcaggcaatctcaagagtattgctatttctgtgctagtctatatgaaaacccagattaaattcgacgaaacatattagtttgcaaaaagatgtggcaacttccatattttctgcatttttttctgttttgatccggatctgtcggctatacagaggtgaaaataatgtaaacgtcggaggcgtaagtacacagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0123100, RefSeq:Os03g0123100