Os01g0643300
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Contents
Annotated Information
Function
- Auxin efflux carrier OsPIN3t is involved in the drought stress response and drought tolerance.The phytohormone auxin plays a critical role in plant growth and development, and its spatial distribution largely depends on the polar localization of the PIN-FORMED (PIN) auxin efflux carrier family members. OsPIN3t is a putative auxin efflux carrier gene in rice and it acts in auxin polar transport and involved in the drought stress response in rice.Overexpression of OsPIN3t led to improved drought tolerance, and GUS activity significantly increased when OsPIN3tpro::GUS plants were subjected to 20% polyethylene glycol stress. [1]
Expression
- This gene is mainly expressed in vascular tissue. OsPIN3t–GFP fusion proteins are localized in plasma membranes, and this subcellular localization changes under 1-N-naphthylphthalamic acid (NPA) treatment.
Evolution
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Labs working on this gene
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References
- Qian Zhang, Jingjing Li, Wenjiao Zhang, et al. The putative auxin efflux carrier OsPIN3t is involved in the drought stress response and drought tolerance.The Plant Journal, 2012, 72(5): 805-816.
Structured Information
| Gene Name |
Os01g0643300 |
|---|---|
| Description |
Similar to Auxin efflux carrier protein |
| Version |
NM_001050227.1 GI:115438824 GeneID:4326565 |
| Length |
4307 bp |
| Definition |
Oryza sativa Japonica Group Os01g0643300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:27619806..27624112 |
| Sequence Coding Region |
27619913..27621032,27621135..27621190,27621278..27621483,27622157..27622242,27622380..27622537 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:27619806..27624112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:27619806..27624112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatatccgggcacgacttctacacggtgatggcggcggtggtgccgctgtacgtggcgatgttcctggcgtacgggtcggtgcggtggtggggcatcttcacgccggaccagtgctccggcatcaaccgcttcgtcgccatcttcgccgtgccgctcctgtccttccacttcatctccaccaacgacccgtacgccatgaacctccgcttcctggcggcggacacgctgcagaagctgctcgtcctggcggggctcgccgcgtggtcgcgcctcccctcgcggaccggcgcgccgcggctggactggtccatcacgctcttctccctctccacgctgcccaacacgctcgtcatggggatcccgctgctgatcgccatgtacgggccatactccggctcgctcatggtccagatcgtcgtgctccagtgcatcatctggtacacgctgatgctcttcctcttcgagttccgcgccgcgcggatgctgatcgccgaccagttcccggacacggcggcgtccatcgtgtccctgcacgtcgacccggacgtggtgtcgctggagggcggccacgcggagacggaggccgaggtggcggcggacgggcggctgcacgtcaccgtgcgccggtcctcggtgtcgcggcggtcgctgctggtcacgccgcggccgtcgaacctgacgggagcggagatctactcgcttagctcgtcgcggaacccaaccccgcggggctccaacttcaaccacgccgacttcttcgccatggtcggcggcgggccaccgcccccgacgcccgctgcggtgcgcggctcgagcttcggcgcctccgagctctactcgctgcaatcgtcgcggggcccaaccccgaggcagtccaacttcgacgagcactcggcacggccgccgaaaccaccggcaacgaccacgggggcactcaaccacgatgccaaggagctccacatgttcgtgtggagctcgagcgcgtctcccgtctcagaagtcagcggcctgcctgtgttcagtggcggcggcggcggcggcgctctcgacgtcggcgccaaggaaatccacatggtcatccccgccgacctgccgcagaacaacggctcaggcaaagagcacgaggagtacggcgcagtggcattgggtggcggcggcggcggagagaacttcagctcgacggcggagctgcacccgaaggtcgtcgacgtcgacggaccgaacgccggcggcggcgccgcgggcgcggggcagtaccaaatgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatccgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtcgccttccggtggcacgtctccatgccagcaatcgtcgagaagtccatctccattctctcggacgcaggcctggggatggccatgtttagcctgggattgttcatggcgctgcagcccagcatcatcgcgtgtggcaaatcagccgccgtcgtctccatggccgtccgcttcctcgcgggccctgccgtcatggccgccgcgtcaatcgccatcggactccgcgggacgctcctgcacgtcgccattgttcaggcggctctaccacaagggattgtgccttttgtttttgcaaaagaatacaatgtccacccggccatcctgagcacagcggtaatttttggcatgctaatagctcttccaatcacattgctgtactacatccttcttggactatga</cdnaseq> |
| Protein Sequence |
<aaseq>MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINR FVAIFAVPLLSFHFISTNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLD WSITLFSLSTLPNTLVMGIPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAA RMLIADQFPDTAASIVSLHVDPDVVSLEGGHAETEAEVAADGRLHVTVRRSSVSRRSL LVTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGA SELYSLQSSRGPTPRQSNFDEHSARPPKPPATTTGALNHDAKELHMFVWSSSASPVSE VSGLPVFSGGGGGGALDVGAKEIHMVIPADLPQNNGSGKEHEEYGAVALGGGGGGENF SSTAELHPKVVDVDGPNAGGGAAGAGQYQMPPASVMTRLILIMVWRKLIRNPNTYSSL LGLAWSLVAFRWHVSMPAIVEKSISILSDAGLGMAMFSLGLFMALQPSIIACGKSAAV VSMAVRFLAGPAVMAAASIAIGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILS TAVIFGMLIALPITLLYYILLGL</aaseq> |
| Gene Sequence |
<dnaseqindica>108..1227#1330..1385#1473..1678#2352..2437#2575..2732#3822..3898#3989..4055#aagaagccactccactcggccgctcctgcatgtataactagctagttctagctcgctcaggcactcgatccaccgccgggcgcgttggattgagataggctgaggagatgatatccgggcacgacttctacacggtgatggcggcggtggtgccgctgtacgtggcgatgttcctggcgtacgggtcggtgcggtggtggggcatcttcacgccggaccagtgctccggcatcaaccgcttcgtcgccatcttcgccgtgccgctcctgtccttccacttcatctccaccaacgacccgtacgccatgaacctccgcttcctggcggcggacacgctgcagaagctgctcgtcctggcggggctcgccgcgtggtcgcgcctcccctcgcggaccggcgcgccgcggctggactggtccatcacgctcttctccctctccacgctgcccaacacgctcgtcatggggatcccgctgctgatcgccatgtacgggccatactccggctcgctcatggtccagatcgtcgtgctccagtgcatcatctggtacacgctgatgctcttcctcttcgagttccgcgccgcgcggatgctgatcgccgaccagttcccggacacggcggcgtccatcgtgtccctgcacgtcgacccggacgtggtgtcgctggagggcggccacgcggagacggaggccgaggtggcggcggacgggcggctgcacgtcaccgtgcgccggtcctcggtgtcgcggcggtcgctgctggtcacgccgcggccgtcgaacctgacgggagcggagatctactcgcttagctcgtcgcggaacccaaccccgcggggctccaacttcaaccacgccgacttcttcgccatggtcggcggcgggccaccgcccccgacgcccgctgcggtgcgcggctcgagcttcggcgcctccgagctctactcgctgcaatcgtcgcggggcccaaccccgaggcagtccaacttcgacgagcactcggcacggccgccgaaaccaccggcaacgaccacgggggcactcaaccacgatgccaaggagctccacatgttcgtgtggagctcgagcgcgtctcccgtctcagaagtcagcggcctgcctgtgttcagtggcggcggcggcggcggcgctctcgacgtcggcgccaaggaaatccacatggtcatccccgccgacctgccgcagaacaacggctcaggcaaaggtccgtcccgacattaatgccgcagtagtagtactgtcacttaatcacgggctccatgtgcaactctaaacatagaccttcccaaattttctacattttcagagcacgaggagtacggcgcagtggcattgggtggcggcggcggcggagagaacttcagcttcggaggcggcaagacggtggacggcgccgaggcagtagacgaggaggcggccttgcctgacgggctgacgaagatggggtcgagctcgacggcggagctgcacccgaaggtcgtcgacgtcgacggaccgaacgccggcggcggcgccgcgggcgcggggcagtaccaaatgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatccgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtcgccttccggtacgccgttttttctttttccctctctccgaagattaacctacctttttcacgtgacctgtgcaattactcattttttctactgcctaagttagttcgggtgataaggtgatttcactcgacagagacgacaagttcggcgaggatcgaggaccgcgatggtgttggtgatgataagcgcgagagcgatattattctcggcgaagccagagggagtgggtagcgcgtaggcggtaggctaggaagcaccgaaactgcccgggggcgtacgtgccgtggcggtgggaataaccgaaaagcagcttttttacggatccccaaacggcggtggtgggccgacgaggtgagtgagtttcccgccggcacggaccaccgccgcgggcccggtcggcaccaatcgcgaactgtaggagctgaaaaaggcagaatttgcacggcgcgcgagcactggtcgtcgtcgagccagtctaccaaacacagtcacacaatagcgtttccaagcaaggaaccatgaacgattggccccgtttcctttggagtaacctgcatctactactactactaatcatcataagagcacacctgttgttattttatcatctctagtggctaatgatgttgatatttactgttccgggagctaaccaacgggcaatgtgttcatgggtcacaggtggcacgtctccatgccagcaatcgtcgagaagtccatctccattctctcggacgcaggcctggggatggccatgtttagcctgggtgggtgcccacgccccttgtgctcatgtcttcccgtagccctacaccgcattgctccgcaattaatccctcttcacacgcactggtgcccactggcccgcgctcgagctaacgctgtcaaactgtctcgtggccaggattgttcatggcgctgcagcccagcatcatcgcgtgtggcaaatcagccgccgtcgtctccatggccgtccgcttcctcgcgggccctgccgtcatggccgccgcgtcaatcgccatcggactccgcgggacgctcctgcacgtcgccattgttcaggtaactatgggttggtttggtttgtggcctaaatacatcttactaaattttgtcaatactaaattttggcaagttttagcatgactaattttggtaaagcaaagttgtgtttggattgaagccaaaatagcctaagttcactattgaaatggcctattttttaggcatgccaaaatttggcttcaaaccaaatagacactaaatactattgaaattgataaatattggtaagcctaatttagatctcaaaccaaaccagtcctatatgcatgcatctaaaagaagttactacagtaagcaacccgtgcaaagtgataatttaatttctcccttatgccaattataaaatttggtagacaagcttatcatgtgtgggggcgtttggctttgccagcagcgtatacagggtcggggttctgatctgtcagaccctggcttatatactctgggcctgtttggcacagctccagctccacccctcctggagtcaaacagtttcagctccactagaactgagctagagctcagtcaaacagtttcagctccaccagaactgggaatggagctgggtagagttctctcacaaaataaactagagttgtggagctaggtttaggcaactccacaactccactccagactcaactcctggagttaaatttaggagttggagctgtaccaaacaggccctccgtatatatgattccatcagcttctttactggaacatatgtactccctccgtcccataataggtgacgtttttgactttttatttgcaacgtttgaccattcattttatttgaaaaatcagtgcaaatataaaaaaaagataagtcatatgtaaagtacttttgataataaagcaaatgacaaacaaaataaataataatttcaaaattttttgaataagacgaatgatcaaacattgataaaaaaactcaaaaagacaagtaatatgggacggaggtagtacttactggagtagtatcaatcattcgagcaatttatttccctgtgcattatatactactagtatatgtgaagctaatgctcattgatatatatatctgggaattcgatttgataggcggctctaccacaagggattgtgccttttgtttttgcaaaagaatacaatgtccacccggccatcctgagcacagcgtaagcaatttcctttgcttgttttgcttgctgatatttttgtttggatggtgtttatatttattctgggcaaattgtcactttttacagggtaatttttggcatgctaatagctcttccaatcacattgctgtactacatccttcttggactatgatcaagaaagcttatggacgctctcacataaaacggaagaaatgggggcaaagagagagaaaaaaaagcgatcctgtccatctcaaacagcgtatgcttatatgtatagcctgttgtcggacattgcccatgatgacaagacaacgaagttgttacagagctatatatctctgcgacatttgtacaagagataacgacagaatgtactcaaatataaccgatattagatatgtgttctgttaaagatctcaac</dnaseqindica> |
| External Link(s) |
- ↑ Qian Zhang, Jingjing Li, Wenjiao Zhang, et al. The putative auxin efflux carrier OsPIN3t is involved in the drought stress response and drought tolerance.The Plant Journal, 2012, 72(5): 805-816.
