Os06g0125000
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Contents
Annotated Information
Function
Please input function information here. Os06g0125000 is a protein-coding gene. The protein Os06g0125000 translated share most of it's amino acid sequence(Query Cover: 99%) with one kind of plants' disease resistance protein which is coding by bacterial resistance gene Resistance to Pseudomonas syringae pv. maculicola 1 (RPM1).
Expression
Please input expression information here. The bacterial resistance gene Resistance to Pseudomonas syringae pv. maculicola 1 (RPM1), encodes a classic cytoplasmic receptor-like protein that is characterized by an amino termi- nal coiled-coil domain, a central nucleotide binding (NB) site and a carboxyl terminal LRR domain. RPM1 was one of the first plant resistance genes to be molecularly described from studies of natural variation in Arabidopsis thaliana (Grant et al., 1995). More- over, RPM1 was the first example of a dual specificity R-protein, recognizing the sequence-unrelated AvrB and AvrRpm1 effector proteins derived from bacterial pathogens of soybean and Brassica species, respectively (Bisgrove et al., 1994). Actual dual specificity recognition is through effector-mediated modifications of RPM1- interacting protein 4 (RIN4) in the presence of the bacterial type III effector proteins AvrRpm1 or AvrB (Mackey et al., 2002).
Labs working on this gene
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References
Please input cited references here.
Structured Information
| Gene Name |
Os06g0125000 |
|---|---|
| Description |
Similar to NBS-LRR disease resistance protein homologue |
| Version |
NM_001063182.1 GI:115466095 GeneID:4339959 |
| Length |
3904 bp |
| Definition |
Oryza sativa Japonica Group Os06g0125000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:1346281..1350184 |
| Sequence Coding Region |
1346281..1349188,1350069..1350184 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:1346281..1350184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:1346281..1350184 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggagacggcgctgagcatggcgaggtccatgctggggggcgccatcagcgcggcttcggcggccgccggcgaagagatgagcttgctcatgggtgtgcagaaggagatatggttcatgaatgatgagctaaaaacaatgcaagcgttcctaatagctgctgaaacaatgaagaagaaggacctgctgttgaaggtgtgggctgagcaagtaaggagcttgtcctacgacattgaagattgtcttgaagagtttatggtccatgtcggaaaccaaagcctcttgcagcaattgacaaatctcaaagatcgccaccgaatagctgtcaagattcgcaacctcaaatcaagacttgaagaagtgagcagcagaaacacacgttacaactcgatcaagatggaggcgaacaacaccttcgatgagatcgagtccatggaggatgttcggaatcattctcgtagcaacatcgacgaagcaaagcttgtaggctttgacacccccaaaaaggagttacttgacaagataaacatggatgccaatgatgatgaccactgtcgggtgctttgtgtggttggcatgggaggattgggtaagactactctggtaaggaagatctttgaaagtaaggaagacatcataaataattttccacatcgtgcttggatcgttgtgtcacagtcattttcgatgatagagatgctcaaagatatgattagccaacttctaggtcatgaatcattgaaaagatttgaagggaagccgatccgagcacacgaccttggtacgcacctacgagatggactgaaagaattgaggtactttgttgtttttgatgacttgtggaacacagatcactgggaatggattagggaatttgctttgcctagtaaaaacaacaaaaggagtcgggtgattgtaacaaccagattagatggagtagctaatgcatgcaccactgaaccatttgtctaccgccttaagctcctagagacggaatgtgccatagatttgctactaaggaagatgggggaaagtaaagaagatatgaagaatgataacaacctgaagagcatagttacacaattagtaaaaaagtgtggttgtttaccactagccatagtaacgataggagcaatgtttgctaataaaccttcgtcgaagtgggaagaaatgtgcagacaacttccttcagagcttgagaacaacccaagccctggagtcgaagcaataaggagggtggtgaccctaagctatggccatttgccatctcatcttaaaccatgctatctatatctaagcatttttcctgaggatattgaaattaaaaggaggcatttggtaaacagatgggtagcggaggggttggttagagctagagttggaatgaccattagtgatgtcggagaaagctactttgatgagctaattagccgaagtatgattcaaccatcaagggtgaatatggaaggacatgttaagagctgccgggtccatgatataatgcgtgatattatagtctcaatttctaaagaggagaattttgtttactcaacaggagataatgtatctacagtaatagtggagaagttccgtcatctgtcatgccatggcggcaactacccaatagttggaatggatttcagtcgtgtccgatcgttaactgtatttggtgagtttgatcagagacccatgttggtgggctcttcaatttgttcagctcaattcacgatgctaagagtcttggatctagagaatgcagtattttcagtgacacaaaaagacataaacaaaattgggttgttgcggcacttgagatatttgaatacgcatactagaagacggtccactatttatgcacttccaagctctatcgggaaattacagaacttacaagttttggacataagagagagtgaaatttctacactaccaactgatatcagtaagctccttatgcttcgtatcctccgttgtagcaagggaccgtggtacttctacttctattttgatccagatgaaccaataaaatgcttgaagcatacgttgcgcatgcccttgatgttgacaccattagttggttctgcagcacgcaattatactattgctgagctacacagggcctactctagccattggtcagagacaccaggcgtgagggttccaacaggaatcagcaaactaaaggagttgcaggtcttagaggttgtagaccttaaactaactaaaagcaaagcaattgaagagctgggtgaacttcgctggctacaaaaattacgggtgtcaacaaagggggcccaggacaagaagcgcaagacactttgtgaagccatcgagaagctatcatccctccaatctctctgtgtttatgagggttactacttcataactgggacacttgagtggctgggtccttgcaatttctcccctcctcccctgctgagaaagctagagttgcatggacgtattcgcgtgatgcccgactcttttaggaaccttaagcagctgcggaagatttttttgcggctaagcgaactagatggtagagccatagagatacttggaacactacccaacctcatgctcctgaatctcgatggcagagcatatgttgggaatgaattagcattcaaaaagcacgagttcccaaatctcaaggagcttcgtatcagtatgctgtccgaactaagagggataagatttgagaaggacgccttgccccacatggaaagaatggaaatcgaatgttgccagttgagatcagggattgttggcatcaagcacctcgaacagctcaacgagatttcacttgggtgtgatgtggcggggcttgatctgctggaacaggaagtaaaggcgcaccccaagacacccgcattgcggctgcttcaagaccgaagcaaaatcgacttggggctccctgtagtcctgacgaaagacgaaggctccaatgttgaagaggaagcaaaggaatccgtccatgacgatgccggggagagctcgcaagtgatctcatcaccgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAETALSMARSMLGGAISAASAAAGEEMSLLMGVQKEIWFMNDE LKTMQAFLIAAETMKKKDLLLKVWAEQVRSLSYDIEDCLEEFMVHVGNQSLLQQLTNL KDRHRIAVKIRNLKSRLEEVSSRNTRYNSIKMEANNTFDEIESMEDVRNHSRSNIDEA KLVGFDTPKKELLDKINMDANDDDHCRVLCVVGMGGLGKTTLVRKIFESKEDIINNFP HRAWIVVSQSFSMIEMLKDMISQLLGHESLKRFEGKPIRAHDLGTHLRDGLKELRYFV VFDDLWNTDHWEWIREFALPSKNNKRSRVIVTTRLDGVANACTTEPFVYRLKLLETEC AIDLLLRKMGESKEDMKNDNNLKSIVTQLVKKCGCLPLAIVTIGAMFANKPSSKWEEM CRQLPSELENNPSPGVEAIRRVVTLSYGHLPSHLKPCYLYLSIFPEDIEIKRRHLVNR WVAEGLVRARVGMTISDVGESYFDELISRSMIQPSRVNMEGHVKSCRVHDIMRDIIVS ISKEENFVYSTGDNVSTVIVEKFRHLSCHGGNYPIVGMDFSRVRSLTVFGEFDQRPML VGSSICSAQFTMLRVLDLENAVFSVTQKDINKIGLLRHLRYLNTHTRRRSTIYALPSS IGKLQNLQVLDIRESEISTLPTDISKLLMLRILRCSKGPWYFYFYFDPDEPIKCLKHT LRMPLMLTPLVGSAARNYTIAELHRAYSSHWSETPGVRVPTGISKLKELQVLEVVDLK LTKSKAIEELGELRWLQKLRVSTKGAQDKKRKTLCEAIEKLSSLQSLCVYEGYYFITG TLEWLGPCNFSPPPLLRKLELHGRIRVMPDSFRNLKQLRKIFLRLSELDGRAIEILGT LPNLMLLNLDGRAYVGNELAFKKHEFPNLKELRISMLSELRGIRFEKDALPHMERMEI ECCQLRSGIVGIKHLEQLNEISLGCDVAGLDLLEQEVKAHPKTPALRLLQDRSKIDLG LPVVLTKDEGSNVEEEAKESVHDDAGESSQVISSP</aaseq> |
| Gene Sequence |
<dnaseqindica>997..3904#1..116#atggcggagacggcgctgagcatggcgaggtccatgctggggggcgccatcagcgcggcttcggcggccgccggcgaagagatgagcttgctcatgggtgtgcagaaggagatatggtgagtgcgtgtgtactgtgtccccatttgattagtactggtttcttacttccttctgtttaattagttcccttaaagaaagaggcgtttcaaagaaagctaattgcatggttattctcgaacagcgatatttcgttcttgctgaccatgcagtgacggagctgcttttcgagtctgggataaacttaaatttattacagtttgctacaagatttttaattttaattaattctttttttttaaaaaaaaataaatcaatcatgtatttgacggtgagcctaggcgatggctctgccccttttacatgtgaatttggacatgtataaagtacagatattgatccatttattgatctatttaaaacctaacgcatcatataatgtgaaaatgcatggggaaagtataatatttcatttatcactgtgatcaaatccatctctccgcaaaaaaaaaagataattaattcatcagatttcatccgtgagcaatccatttagatctcattctactttatttgttataattaaagagatgtgatatgagtccacatggtaagggtatcaatgggaaatatactccctgatgtacatggcatgttttgtcatctccgttgtcattgctccatgatttgagaaaattcgtttgaagtttgtactcttaaaatttcaaacatcatctttttgagatatttttacatgcatatataggacctaggcatgtagaggtagaaaaatacgctgagtcacaatacctttaataattcttctaatctgaattaataaaacaagaatttagacttccagagcaaaatcagttattcggaattccatatactcaagagtgctaaattttgttttaccactgtttttttttttggcaggttcatgaatgatgagctaaaaacaatgcaagcgttcctaatagctgctgaaacaatgaagaagaaggacctgctgttgaaggtgtgggctgagcaagtaaggagcttgtcctacgacattgaagattgtcttgaagagtttatggtccatgtcggaaaccaaagcctcttgcagcaattgacaaatctcaaagatcgccaccgaatagctgtcaagattcgcaacctcaaatcaagacttgaagaagtgagcagcagaaacacacgttacaactcgatcaagatggaggcgaacaacaccttcgatgagatcgagtccatggaggatgttcggaatcattctcgtagcaacatcgacgaagcaaagcttgtaggctttgacacccccaaaaaggagttacttgacaagataaacatggatgccaatgatgatgaccactgtcgggtgctttgtgtggttggcatgggaggattgggtaagactactctggtaaggaagatctttgaaagtaaggaagacatcataaataattttccacatcgtgcttggatcgttgtgtcacagtcattttcgatgatagagatgctcaaagatatgattagccaacttctaggtcatgaatcattgaaaagatttgaagggaagccgatccgagcacacgaccttggtacgcacctacgagatggactgaaagaattgaggtactttgttgtttttgatgacttgtggaacacagatcactgggaatggattagggaatttgctttgcctagtaaaaacaacaaaaggagtcgggtgattgtaacaaccagattagatggagtagctaatgcatgcaccactgaaccatttgtctaccgccttaagctcctagagacggaatgtgccatagatttgctactaaggaagatgggggaaagtaaagaagatatgaagaatgataacaacctgaagagcatagttacacaattagtaaaaaagtgtggttgtttaccactagccatagtaacgataggagcaatgtttgctaataaaccttcgtcgaagtgggaagaaatgtgcagacaacttccttcagagcttgagaacaacccaagccctggagtcgaagcaataaggagggtggtgaccctaagctatggccatttgccatctcatcttaaaccatgctatctatatctaagcatttttcctgaggatattgaaattaaaaggaggcatttggtaaacagatgggtagcggaggggttggttagagctagagttggaatgaccattagtgatgtcggagaaagctactttgatgagctaattagccgaagtatgattcaaccatcaagggtgaatatggaaggacatgttaagagctgccgggtccatgatataatgcgtgatattatagtctcaatttctaaagaggagaattttgtttactcaacaggagataatgtatctacagtaatagtggagaagttccgtcatctgtcatgccatggcggcaactacccaatagttggaatggatttcagtcgtgtccgatcgttaactgtatttggtgagtttgatcagagacccatgttggtgggctcttcaatttgttcagctcaattcacgatgctaagagtcttggatctagagaatgcagtattttcagtgacacaaaaagacataaacaaaattgggttgttgcggcacttgagatatttgaatacgcatactagaagacggtccactatttatgcacttccaagctctatcgggaaattacagaacttacaagttttggacataagagagagtgaaatttctacactaccaactgatatcagtaagctccttatgcttcgtatcctccgttgtagcaagggaccgtggtacttctacttctattttgatccagatgaaccaataaaatgcttgaagcatacgttgcgcatgcccttgatgttgacaccattagttggttctgcagcacgcaattatactattgctgagctacacagggcctactctagccattggtcagagacaccaggcgtgagggttccaacaggaatcagcaaactaaaggagttgcaggtcttagaggttgtagaccttaaactaactaaaagcaaagcaattgaagagctgggtgaacttcgctggctacaaaaattacgggtgtcaacaaagggggcccaggacaagaagcgcaagacactttgtgaagccatcgagaagctatcatccctccaatctctctgtgtttatgagggttactacttcataactgggacacttgagtggctgggtccttgcaatttctcccctcctcccctgctgagaaagctagagttgcatggacgtattcgcgtgatgcccgactcttttaggaaccttaagcagctgcggaagatttttttgcggctaagcgaactagatggtagagccatagagatacttggaacactacccaacctcatgctcctgaatctcgatggcagagcatatgttgggaatgaattagcattcaaaaagcacgagttcccaaatctcaaggagcttcgtatcagtatgctgtccgaactaagagggataagatttgagaaggacgccttgccccacatggaaagaatggaaatcgaatgttgccagttgagatcagggattgttggcatcaagcacctcgaacagctcaacgagatttcacttgggtgtgatgtggcggggcttgatctgctggaacaggaagtaaaggcgcaccccaagacacccgcattgcggctgcttcaagaccgaagcaaaatcgacttggggctccctgtagtcctgacgaaagacgaaggctccaatgttgaagaggaagcaaaggaatccgtccatgacgatgccggggagagctcgcaagtgatctcatcaccgtga</dnaseqindica> |
| External Link(s) |
