Os03g0129350

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0129350| Description = Conserved hypothetical protein| Version = NM_001186322.1 GI:297721774 GeneID:9269331| Length = 4380 bp| Definition ...")
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Gene Name

Os03g0129350

Description

Conserved hypothetical protein

Version

NM_001186322.1 GI:297721774 GeneID:9269331

Length

4380 bp

Definition

Oryza sativa Japonica Group Os03g0129350, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1645401..1649780

Sequence Coding Region

1645401..1645423,1646315..1646382,1646550..1647025,1647290..1647658,1649565..1649780

Expression

GEO Profiles:Os03g0129350

Genome Context

<gbrowseImage1> name=NC_008396:1645401..1649780 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1645401..1649780 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacggcggatgaggtcggcggcggcggcggcggtggtggcgccggagttggagcgggcgatcaggtgaggagggcgaagacggcggcgctgttcctggcggccgtcgcgctcccgtgcctcgtgctgtaccgcgccgccgtgtcgccggcggggctgttcctccggccggccgccctgccggcgccgccgcgcggcgacgtcgacccggtgaacagtgaggacgcgaggctggaacgcgtcctgagggcggcggcgatggcgaacggcacggtgatcctgacgacgctgaactcggcgtgggcggagcccgggtcggtggtggacgtcttcctcgagagcttccggatcggcgacgaaacgaggtggctcctcgaccacctcgtcatggtctccctcgacctcacggcgcaccgccgctgcctgcagatccaccgccactgcttcgccctcaccaccgacgatggcttcgacttctccggcgagaagaacttcatgaccgacggctacctcaagatgatgtggcgacgcatcgatttcctcggccacgttcttgccaagggctacagcttcatcttcacggacacggacatcgtgtggttcaggaacccgctgccgcacctgcaccacgacggcgacttccagatcgcctgcgaccacttcaccggcgacccggacgacctcagcaacagccccaacggcgggttcgcgtacgtgcgctcgacctcggcgacggcggcgttctaccggtactggtacgcggcgagggagaggcacccgggtctccacgaccaggacgtgctcaacctcatcaagcgcgacgcctacgtcgcccgcctcggcgtcaggatcaggttcctcagcaccgacctcttcgccggcctctgcgagcacggccggaatctgagcacggtgtgcaccatgcacgccaactgctgcgtcggcctccgccggaaggtcgacgacctcgggctcatgctccaggactggaggaggttcatggcgacgcccgggagtgaccggcattctgtcacctggagtgtgcctaggaattgcagtttagagccaacacttgctgttgtctgtaccatagatgagatgctgactggaacaaatgaacatgcagaagcgttggagcaaacgctctaa</cdnaseq>

Protein Sequence

<aaseq>MATADEVGGGGGGGGAGVGAGDQVRRAKTAALFLAAVALPCLVL YRAAVSPAGLFLRPAALPAPPRGDVDPVNSEDARLERVLRAAAMANGTVILTTLNSAW AEPGSVVDVFLESFRIGDETRWLLDHLVMVSLDLTAHRRCLQIHRHCFALTTDDGFDF SGEKNFMTDGYLKMMWRRIDFLGHVLAKGYSFIFTDTDIVWFRNPLPHLHHDGDFQIA CDHFTGDPDDLSNSPNGGFAYVRSTSATAAFYRYWYAARERHPGLHDQDVLNLIKRDA YVARLGVRIRFLSTDLFAGLCEHGRNLSTVCTMHANCCVGLRRKVDDLGLMLQDWRRF MATPGSDRHSVTWSVPRNCSLEPTLAVVCTIDEMLTGTNEHAEALEQTL</aaseq>

Gene Sequence

<dnaseqindica>4358..4380#3399..3466#2756..3231#2123..2491#1..216#atggccacggcggatgaggtcggcggcggcggcggcggtggtggcgccggagttggagcgggcgatcaggtgaggagggcgaagacggcggcgctgttcctggcggccgtcgcgctcccgtgcctcgtgctgtaccgcgccgccgtgtcgccggcggggctgttcctccggccggccgccctgccggcgccgccgcgcggcgacgtcgacccggtggtgagttgttcgcccgccttcttcctctaggatgatcaaggtgtgtatacgtaaacgatgaacacgtctgtcagtcacgtacggctgaactgaaggctgtttttgttggcaaaaattatttttctttaatcagcttgtgattcatgttcatgatcaccagaaaatgcaggaacacctctttgcatctcattgattttttttttgggtgcaaaaatggtggacggttaaaattcctcattgttagcagtagtaaatagttaaatactccactgtagaggaagaatagtaaaactgatgagagcgatggtgaattcgggagatccaccaatttgagataagatcagtgccttcgcaaattgcaaattgttttttttcgcgaacgcttttatttccgcgaacgcgcaaattgttttcaaatggtaaggctttagtctaaactgtaaattatgttgacaatgtgagtgctgttaacctcctcatttggcttctttctagaaacactattattcaattgcaacgtgccagaaatttgctcccaggttagtatgtaattcaaccctgtgatgcatgcacccgagaattcactcccagaaatgaaattttactcgtcctgtagcaggcctacagcgtttgattggccacggcacttaaaaacttttttttgacagtcgacatccatgccaaaatgccagattactggcatggttggcattcttagaaagcaacatgaaaaactgtctgccaatcaaattaacagactagtacatctcttctattggcaaaggcatcttttgaaatagaggattttttaaagagaatttcacgggaattggactgattcatgtgaaaatccggcaaacttcattcatttcaaactagtcgtaaaaaacacaggaatggtagttacatttgaacatctatttttttttcttaaaaaaacctgccacaatagtaacagcacactattcatctgaaatttttttatttatatttctcttaaactaaggcagcgttcgagagggtgagagagtgagtttgtttgtttcgttttctgcgcgcacgtttcccaaactactaaacagttatgggtgagggcaagggcaccaaggctttgcgctcagcctcgagcgccgtcatccgagcctgcagagaggcgttagcctctgacgcccgccgctcttgggcggcagctgcgtcgaggatgccgcgcgcgtcctggatcctcctctccaggtcctcggcatgagcctcatattggaggcagatgtcgcccagcgcctcgtccaggacgctcgaggcgatcagtgccgcctgccgctcctcctccgtatcccgcatgagggagtccaggacctcctcgcgcgcctggatttcggctagttgggcttggcgcattttgcgctccaccctcaccatgtcatccacggcgcgtcgctcctcttcgacccgcgcgcggtccgcggcgagctaggcccactctgcatccaggcctaatttttctataatcaacatgttctcttttttgcgttttttgtaaaaattttctataggaaaattgctttaaaaaatcatattaatccatttttgaaatttaaaatagttaatactcaattaatcataagctaatagctcatctcgttttgcgtatcttcccaatctcctcaatccccttctcctcaaacacaccctaagttgagtttagatttaagatttgtgagagtgtatttcatatctacgcatatctctagtagttttttcataaatttacaaaatttttagatatgattttcatgagttttcacatttagcttgttttcaccaaatatgtcctctttttatacaccatatttccggcaggtaacagttaatcaatgtgacatatatgaggttgtgcttgtgcacgcagaacagtgaggacgcgaggctggaacgcgtcctgagggcggcggcgatggcgaacggcacggtgatcctgacgacgctgaactcggcgtgggcggagcccgggtcggtggtggacgtcttcctcgagagcttccggatcggcgacgaaacgaggtggctcctcgaccacctcgtcatggtctccctcgacctcacggcgcaccgccgctgcctgcagatccaccgccactgcttcgccctcaccaccgacgatggcttcgacttctccggcgagaagaacttcatgaccgacggctacctcaagatgatgtggcgacgcatcgatttcctcggccacgttcttgccaagggctacagcttcatcttcacggtaaaaagagaagaaaaacaataaaacttaattttaaaattgattttaaggttttcatgtagtttatttttatatggttatgaacatagatataaaagttttatctatatattatattttttatcacttataagttgtgttccttatgatccatagtaagcaattgtaagcgaaacaatggcttttctaatcaaatcttttgctcaaagaacatactattctttttgttcaaagtctgaactttgtgaaggtttgtttcgtcaggacacggacatcgtgtggttcaggaacccgctgccgcacctgcaccacgacggcgacttccagatcgcctgcgaccacttcaccggcgacccggacgacctcagcaacagccccaacggcgggttcgcgtacgtgcgctcgacctcggcgacggcggcgttctaccggtactggtacgcggcgagggagaggcacccgggtctccacgaccaggacgtgctcaacctcatcaagcgcgacgcctacgtcgcccgcctcggcgtcaggatcaggttcctcagcaccgacctcttcgccggcctctgcgagcacggccggaatctgagcacggtgtgcaccatgcacgccaactgctgcgtcggcctccgccggaaggtcgacgacctcgggctcatgctccaggactggaggaggttcatggcgacgcccgggagtgaccggcattctgtcacctggagtgtgcctaggaattgcaggtgattgattttccgagaagaagctgttcgcgctttgtgatttgattagttgcatgttttgttctgattagttctcttgttcttgtgatgatttgttcttttgcagtatgaagaaactggggcggtaggagattggaaagattaattgtttaattgcaatgtgttagtttagagccaacacttgctgttgtctgtaccatagatgagatgctgactggaacaaatgaacatgcaggtaattgtcgttgacaatactactcttcttgattagtgctttctaagttgggaagtgacagtacaaatttagtcaaggtatacagcttaattaactgtagaaaaccctcttttttaatacattttttccacgctctgtagttctttcgcatctaatccccgatctgaacaattgaccaaataatgtgttactgatagctttgagataacttcaagctcatagatacattttgtagcggcatttctctgaaacatgaattttacaacggcatacgcccaaatttccaacgaaaaacagtgtccatttcgttgtcctgaatccactgcaatggcattcgagctcatggagctcgcacggccgcattgtcatgacatacctgtagacagaattagtgaaatggatatgaattcagacctggagcagaatgaccgaaatgttgagagtttggtgcaataacagaaaagtttctcctaccgctgctgatgctgatgccatggacgattaaacccataatataaactctgcaaacttccacagaacagcctagcagcaggaatggaagaggcaagcacaggagagagaggcaaaagtgaagtccagcttcaaactgaatctcctgctcctctgcatgccccttccactgctgctgctacagccaaaaaaccagacctaacataacacctacctatcccaaaccaaattttgctgtggctgctgctgatgcatccattggtgaagggtggcatatttgtaccccggccatggtgcactggtagtagtacaagttagctgcagtacatatgggggggagatcgttaggggcggcttgtacttcaggcttgcaaatatcatcagtgtactatggctttcagctgtactcttgtactgcagaagcgttggagcaaacgctctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0129350, RefSeq:Os03g0129350