Os03g0129800

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0129800| Description = Homeodomain-like containing protein| Version = NM_001055385.1 GI:115450498 GeneID:4331498| Length = 4979 bp| Defini...")
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Gene Name

Os03g0129800

Description

Homeodomain-like containing protein

Version

NM_001055385.1 GI:115450498 GeneID:4331498

Length

4979 bp

Definition

Oryza sativa Japonica Group Os03g0129800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1651178..1656156

Sequence Coding Region

1651178..1651492,1652000..1652465,1654347..1654509,1655562..1655598,1655726..1655802
,1656024..1656156

Expression

GEO Profiles:Os03g0129800

Genome Context

<gbrowseImage1> name=NC_008396:1651178..1656156 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1651178..1656156 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggcggcggcagggagaggaacggcggcgtcaggcagtacaaccgatccaaggtgccgcggctacgctggacgcctgacctgcaccactgcttcgtccatgccattcacaagctcggcggccaggacaaggctacaccgaagcgagttttgcagctgatgggagtgggaggactcaccatatctcatgtcaaaagccatcttcagatgtacaggaacatgaggaatgatcttggaatgcaagggatacaggtgcaacaggtggatcaggagcacacatatggaggtggtgtggaagtttggactgatatgcagcagtgtgatcatgatgagtgtgatgtcccttgctgcagctgccactccccaaagcctagaaaggagccactgcttcacctccaactgaaaagcagtggcatgaatattgacgaaccaggcacgcgcgcacgcattgccgcgcccaatgtacgcagctgcagggacgacgccgcagcatctgcgacggagacgcgacgacgacgtggtgggaggccggaggaggtagacgacgacgcgaacgcgagcacgagccccagaattagccagctgcagctgctgcgtctcagaggccatggaatacgtgagagcgacatgtcaccgtcgacgagcctgcagtgctactatgtacgcagccagaggacgacgacgatgccgccgggcgctgctgctgcagcagccggcggcgatggcggatcacagtgctacgccgcacctcggtacagctcttcctccaagctgaaattcttggggttcgtggtgacatcggggcctcctcctcctcgtcttcctcctcctgctgcctgctgctgcggcagcgatgacaacatcccttttcaggtcggcacgtttgccccacaccgcgtcgcgccgccaacggcgagctgcggcggcggcggcggcggcggccgcgcggaggcgcgcccctcgtcgtcgtatcgctcggtgtggttcgaaccggccgccgccgccgccgcgagcaacaacggcgtggcgccggacggcgagcacgacgacggctgctcgctctcgctctcgctggcgttggacacgggatgcgccggcgccggcggcagcctggtctcgtcgacgacgtcgtcgtcgtcgggaagccggatcagcctcgacttgtcgctctccacgcttgactcgtag</cdnaseq>

Protein Sequence

<aaseq>MVGGGRERNGGVRQYNRSKVPRLRWTPDLHHCFVHAIHKLGGQD KATPKRVLQLMGVGGLTISHVKSHLQMYRNMRNDLGMQGIQVQQVDQEHTYGGGVEVW TDMQQCDHDECDVPCCSCHSPKPRKEPLLHLQLKSSGMNIDEPGTRARIAAPNVRSCR DDAAASATETRRRRGGRPEEVDDDANASTSPRISQLQLLRLRGHGIRESDMSPSTSLQ CYYVRSQRTTTMPPGAAAAAAGGDGGSQCYAAPRYSSSSKLKFLGFVVTSGPPPPRLP PPAACCCGSDDNIPFQVGTFAPHRVAPPTASCGGGGGGGRAEARPSSSYRSVWFEPAA AAAASNNGVAPDGEHDDGCSLSLSLALDTGCAGAGGSLVSSTTSSSSGSRISLDLSLS TLDS</aaseq>

Gene Sequence

<dnaseqindica>4665..4979#3692..4157#1648..1810#559..595#355..431#1..133#atggtgggcggcggcagggagaggaacggcggcgtcaggcagtacaaccgatccaaggtgccgcggctacgctggacgcctgacctgcaccactgcttcgtccatgccattcacaagctcggcggccaggacagtatgttcttcgtcgacctcatcctcatctagctcatctcatatgtgtgatgtgtcttgatcatactagcttggggtttatctgcatcttttcctactctctttctagttctatatatttgtttgcatgtttcttctctatagctagttctaagctccattttcatatgagtaccagaggtttttatctttctcatgttggtgtgtgggtgtgatgtgcagaggctacaccgaagcgagttttgcagctgatgggagtgggaggactcaccatatctcatgtcaaaagccatcttcaggtgtagtttaattatcagtgttggccttatatgtctcatgtccttgtgacttgtcttcttcttcggttgcttctcctgcttcctttttagtagtatcactaatgttgttttatgttctttggagcagatgtacaggaacatgaggaatgatcttggaatgcaaggtactttgctttgaatgatcttggaatgtttatatatgtattataaacattacgtacatacttttatacacgtacattcttttgtttttttcttttaactttgctttgcaatgtgttggctttgactagctacttctataggtatttttgcctgccaggaatggttcaggcagagctctgcttttttcaacaaacaaaagtttgaagtaaaaaggatatattccccgagacgtgtctatcttgttggtcctgaactgcagagtctccaaatatagctactacagtactctacattcctcactgctaaaactgtgaagaatatacagaccccagttagtcacaattcttattaaccaccgatgcatacataatgcaggaagatgcattttcttgtcgatgctactagtcttgaaggttgttaatcacaggctagtcagagtagtgttaaggtcttaagcaccttatttcgccattaaagaagaactgttgggcacacttgcttgtatgcagatgcatgtgtgcatggatggcacacttctcaaaatataacaattctttgaaattttttatactaattctttgggctatacagtgttagttcctttatcctaatgctgcatgcagctgctactagtaactccagtactccatgagaggaggaaagctaaggaaagaaaaacctaaggccctgtttagatgggactaaaacttttaagtccctatcacatcggatgtttgaaaattaattataaatattaaacgtagactattaataaaactcatccataatcttggactaatttgcgagacgaatctaatgagcctaattaatccatgattagcctatgtgatgctacagtaaacattctctaattatagattaattaggtttaaaaaatttgtctcgtgaattagcttttatttatgtaattagttttgtaagtagtctatatttaatactctaaattagtgtctaaaaacatggactaaagttaagtccctgatctaaacaccacctaaaaccattcttcttttgccaatcttgtgatcagggatacaggtgcaacaggtggatcaggagcacacatatggaggtggtgtggaagtttggactgatatgcagcagtgtgatcatgatgagtgtgatgtcccttgctgcagctgccactccccaaagcctagaaaggagccactgcttcacctccaactgaaaaggtcattgccctttatttggagcaatcagtttatgctctgtcaatctatgagccatcagtcacatcatgagcaattcttatcacgaataatgtcaacagtttaaaaccatcattttgcattcactttaccctctaattcaaatattcaattagattgtgtttagttcctaaaattagggagaagtttgaggaaagttgatagtttggaaaaaaaagttaggagtttatgtgagtagaaaaattttagatgtgatgtgatgtgatgtgatggaaagttaagtttggggaaagtttggtgtgaattaaactatcacatcgaatgtttgaacacttgcatgaagtattaaatataggctaaaaatataactaattacacagattgcgactaatttacgagatgaatcttttaagcctagttgctccatgatttaacaatgtggtgctacagtaaacatttgctaatgacaagttatttaggcttaataaattcgtctcgcggtttactgacggattctataattagtttttttaccagtgcccaaataccccatgcgagaccctatataatacccgatgtgatacgccaaaactttacacccctagatgtaaacaccccctaaatatctaactatatacgttgttagaagttgattttttataggatgcaacatcttgaggcatcccatcaatatttctagataagtgaaaaacttgaaaaaaaaaaggctactagtaataagcaaagggatgtcttacttgtatccatttgtgtagccacaaattcttgtattattttagaatggacatagtaatacttacttgatgtggggcctgttcagatttatgtcattttaactcatatcattatttgataaaattgacaactgtgtgacaaaatttagtttgttataaaatatttgtcatgcctagataattgactacattatattagcctatcctactaaatcttggtaattaatgtttctaacttgttgaaattttggcaatgataaattttggaaagattgaaaatgactataaagtgaacaaagccgtgatgtttgcatggctataacaagcaattcgtattatatccacgggtatgttttgagaagaatatagtggtactagttcttttattagaatgttttgacaaactttgttctgttataggagcatttatagttgtggaccccattagtacaatttaaaataactagaaaccttaaaacacaatgattatttagatggagcttaaaattcatagatacagctgatgaaaatatgagaagggcttagttttttagcttatagattctagtgcattttgtagatcttgtagctattggttactcagaatctgagtatctatactgtttggaaagatataggtttttataagacaaattacaactgtcagaagcctctcaaacagggcctaacgtattattgttttattgaacgagcttcttatattcttcttttcctttggtgaattttacataactaaaatgcactaggtattatagaacttcttgacaccctagaatatgtccaccaatctaatttaaagcatcaagattttctttttgagaattatgtcgtcagatttgttatttgaagtacttccacatatactactatatcccaatacaaattaagttgcagaaagtaatggacaaagtggcatctcaaacaccatagaaagttaaaaacatctcgaacacacaaagtcagtcacactgaaactagatctgcatgcatagttagccccatttgtcactagtgcgacactagttttgcacgctggcacgctgcacacacgcatgcatgtttcccatttctattccctttttcctctatctctctctctctcctgcagcagtggcatgaatattgacgaaccaggcacgcgcgcacgcattgccgcgcccaatgtacgcagctgcagggacgacgccgcagcatctgcgacggagacgcgacgacgacgtggtgggaggccggaggaggtagacgacgacgcgaacgcgagcacgagccccagaattagccagctgcagctgctgcgtctcagaggccatggaatacgtgagagcgacatgtcaccgtcgacgagcctgcagtgctactatgtacgcagccagaggacgacgacgatgccgccgggcgctgctgctgcagcagccggcggcgatggcggatcacagtgctacgccgcacctcggtacagctcttcctccaagctgaaattcttggggttcgtggtgacatcggggcctcctcctcctcgtcttcctcctcctgctgcctgctgctgcggcagcgatgacaacatcccttttcaggtactccggcctcctcatatcctactcccagtaatagtactagtagtagtctttctcggctatccatggatgtgattcactagtgatcgatcagagattcagagggacaaatcgtatggatggatggattggatcatcaatccactactctgtctcagtctgtccaaacacagtagctagcccgttcccctgcaaattaaagtgtttgtgtgcgtcgacgttcgtgcagtgcatacatgcagccatgcacaaacccatggtgaattggtgatgcatggtagtgcctttttcttttctttttttttcatgtctagtctctgcagctttgcgacacataaaacattcacagtagcttgcttccctccaatcactccaaaaagtcacaaaagctcgaagtgaacagccggatagtccctacctttccctttttgtcgtaaggaaaaaaaaatcaacagtaaaagttcactttaaccgctgattaattaccacgtggcgctgttcatgcaggtcggcacgtttgccccacaccgcgtcgcgccgccaacggcgagctgcggcggcggcggcggcggcggccgcgcggaggcgcgcccctcgtcgtcgtatcgctcggtgtggttcgaaccggccgccgccgccgccgcgagcaacaacggcgtggcgccggacggcgagcacgacgacggctgctcgctctcgctctcgctggcgttggacacgggatgcgccggcgccggcggcagcctggtctcgtcgacgacgtcgtcgtcgtcgggaagccggatcagcctcgacttgtcgctctccacgcttgactcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0129800, RefSeq:Os03g0129800