Os03g0130100

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Revision as of 12:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0130100| Description = Similar to Acyl-activating enzyme 11| Version = NM_001055387.1 GI:115450502 GeneID:4331500| Length = 2083 bp| Defin...")
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Gene Name

Os03g0130100

Description

Similar to Acyl-activating enzyme 11

Version

NM_001055387.1 GI:115450502 GeneID:4331500

Length

2083 bp

Definition

Oryza sativa Japonica Group Os03g0130100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1684398..1686480

Sequence Coding Region

1684526..1684723,1684858..1686396

Expression

GEO Profiles:Os03g0130100

Genome Context

<gbrowseImage1> name=NC_008396:1684398..1686480 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1684398..1686480 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcagcttcccaagcgcccggcgaactacgtgccactgagccctgtggggttcctgccgcgcgccaatgccgtctacggcgaccgcacctccgtcatctacggccgcgtccgcttcacctggagccagacctacgcccgctgccgccgcctcgcctcctccctcctctccctcggcgtccgcaaccacgacgtcgtgtcggttttggcgccgaacgtgccggcaatgtacgagatgcacttcgcggtgccgatggccggggcggtgctcaacaccatcaacacgcggctcgacgcgagggcggtggcgggcatcctgcggcactccgaggccaaggtgttcttcgtcgactaccagtacgtgcgcctcgccagcgacgcgctccagatcgtcgccgacgaggggaggcacgtcccgctcgtcgccgtcatcgacgacattgacgtgcccaccggcgtccgcctcggcgagctcgagtacgaggggctggtcgcccgtggcgaccccgccgccgagctgcccagcctcgccgacgagtgggacgccgtcacgctcaactacacgtcgggcaccacgtcggcgcccaagggcgtggtgtacagccaccgcggcgcgtacctgagcaccatgagcttgctcatgtcgtgggtcgtcggcgacgagccggtgtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggcagcgcgcggcggcgtcaacgtctgcatccgcgacgcgcgcgccgcggacatctaccgcgccatcgcgcgccacggcgtcacccacctgtgctgcgcgccggtggtgttcaacatcctgctcgagggcggcgaggcggcggcgaagcagctcgcggccccggtccacgtgctcaccggcggggcgccaccgccggccgccctcctcgagcgcgtcgagcggatcggcttccgcgtgacgcacgcgtacgggctcaccgaggccaccggcccggcgctggcgtgcgagtggcgcgcgcagtgggaccgcctgccgctgccggagcgcgcgcggctcaagtcccggcagggcgtcagcgtcctgtccctcgccgacgccgacgtcaaggacgccaagacgatggcgagagtgccgcgcgacggcaagaccgtcggcgagatcgtgctccgcggcagcagcatcatgaagggctacctcaacaacccggaggcgaacagcgacgccttcaagggcgagtggttcctgaccggcgacgtcggcgtcgtgcacgccgacggctacatcgagatcaaggacaggtccaaggacgtgatcatcagcggcggcgagaacatctgcagcaaggaggtggaggaggtgctgttccagcaccccgccgtcgccgacgcggcggtggtcgccatgccgcacccgcactggggcgagacgccgtgcgcgttcgtcgtggcgagggacaaggcggccggggtgtgcgaggacgacgtcgtcgcgttctgccgcaagcacatggcgcggttcatggtgcccaagaaggtggtcgtctacgacgccatcccgaggaacggcaacggcaaggtcgagaagaacttgctccgggaggcggccaagaagctggcgccggcggccgtgccggcgcagaagacgaaggtgaagacgacgacgacgacggtcggcggccgccgcggcgagcacccggtggcgcatgtcatggccgtgtcaaggctttag</cdnaseq>

Protein Sequence

<aaseq>MEQLPKRPANYVPLSPVGFLPRANAVYGDRTSVIYGRVRFTWSQ TYARCRRLASSLLSLGVRNHDVVSVLAPNVPAMYEMHFAVPMAGAVLNTINTRLDARA VAGILRHSEAKVFFVDYQYVRLASDALQIVADEGRHVPLVAVIDDIDVPTGVRLGELE YEGLVARGDPAAELPSLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTMSLLMSWV VGDEPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARAADIYRAIARHGVTHLCCA PVVFNILLEGGEAAAKQLAAPVHVLTGGAPPPAALLERVERIGFRVTHAYGLTEATGP ALACEWRAQWDRLPLPERARLKSRQGVSVLSLADADVKDAKTMARVPRDGKTVGEIVL RGSSIMKGYLNNPEANSDAFKGEWFLTGDVGVVHADGYIEIKDRSKDVIISGGENICS KEVEEVLFQHPAVADAAVVAMPHPHWGETPCAFVVARDKAAGVCEDDVVAFCRKHMAR FMVPKKVVVYDAIPRNGNGKVEKNLLREAAKKLAPAAVPAQKTKVKTTTTTVGGRRGE HPVAHVMAVSRL</aaseq>

Gene Sequence

<dnaseqindica>129..326#461..1999#acctcgatcatatcatccataatccttcaagctcttgttggctttgcttaattgcagctgccactagctttgttaggatcaatcacatccatctacgtgtgtagagcgtcgtgacagagagttttgtgatggagcagcttcccaagcgcccggcgaactacgtgccactgagccctgtggggttcctgccgcgcgccaatgccgtctacggcgaccgcacctccgtcatctacggccgcgtccgcttcacctggagccagacctacgcccgctgccgccgcctcgcctcctccctcctctccctcggcgtccgcaaccacgacgtcgtaagtagatcgaatcctagctacgaatatgaacatacatagcgtaagttcagattcgtagccggaagttggtttcgtttcttgcgtgtcaaacacgtgtgtgattgtttggaatctgtgtgttgtgtgtgtaggtgtcggttttggcgccgaacgtgccggcaatgtacgagatgcacttcgcggtgccgatggccggggcggtgctcaacaccatcaacacgcggctcgacgcgagggcggtggcgggcatcctgcggcactccgaggccaaggtgttcttcgtcgactaccagtacgtgcgcctcgccagcgacgcgctccagatcgtcgccgacgaggggaggcacgtcccgctcgtcgccgtcatcgacgacattgacgtgcccaccggcgtccgcctcggcgagctcgagtacgaggggctggtcgcccgtggcgaccccgccgccgagctgcccagcctcgccgacgagtgggacgccgtcacgctcaactacacgtcgggcaccacgtcggcgcccaagggcgtggtgtacagccaccgcggcgcgtacctgagcaccatgagcttgctcatgtcgtgggtcgtcggcgacgagccggtgtacctgtggacgctgcccatgttccactgcaacgggtggaccttcacctggggcatggcagcgcgcggcggcgtcaacgtctgcatccgcgacgcgcgcgccgcggacatctaccgcgccatcgcgcgccacggcgtcacccacctgtgctgcgcgccggtggtgttcaacatcctgctcgagggcggcgaggcggcggcgaagcagctcgcggccccggtccacgtgctcaccggcggggcgccaccgccggccgccctcctcgagcgcgtcgagcggatcggcttccgcgtgacgcacgcgtacgggctcaccgaggccaccggcccggcgctggcgtgcgagtggcgcgcgcagtgggaccgcctgccgctgccggagcgcgcgcggctcaagtcccggcagggcgtcagcgtcctgtccctcgccgacgccgacgtcaaggacgccaagacgatggcgagagtgccgcgcgacggcaagaccgtcggcgagatcgtgctccgcggcagcagcatcatgaagggctacctcaacaacccggaggcgaacagcgacgccttcaagggcgagtggttcctgaccggcgacgtcggcgtcgtgcacgccgacggctacatcgagatcaaggacaggtccaaggacgtgatcatcagcggcggcgagaacatctgcagcaaggaggtggaggaggtgctgttccagcaccccgccgtcgccgacgcggcggtggtcgccatgccgcacccgcactggggcgagacgccgtgcgcgttcgtcgtggcgagggacaaggcggccggggtgtgcgaggacgacgtcgtcgcgttctgccgcaagcacatggcgcggttcatggtgcccaagaaggtggtcgtctacgacgccatcccgaggaacggcaacggcaaggtcgagaagaacttgctccgggaggcggccaagaagctggcgccggcggccgtgccggcgcagaagacgaaggtgaagacgacgacgacgacggtcggcggccgccgcggcgagcacccggtggcgcatgtcatggccgtgtcaaggctttagggcaatcaccaaaatgtcaccaatctttatcggtgaaccggtgatatcaccttttgcacgtaggaatttggcactacgcctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0130100, RefSeq:Os03g0130100