Os01g0112400
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Contents
Annotated Information
Rice at reproductive stage is more sensitive to environmental changes. Os01g0112400 plays a role in response to heat stress.
Function
In the rice genome, transporter family genes are grouped into 4 distinct types: ATP-dependent transporters, secondary transporters, ion channels, and unclassified transporters. As a gene related to sugar, peptide, amino acid and other metabolites transport,most genes are heat-induced or identified as HR genes. While OsTIP4;1(Os01g0112400) and OsTIP4;1(Os05g0231700) were continuously late elevated during heating in rice panicle . the reason is still unknown.
Laboratory
Key Laboratory for Crop Germplasm Innovation and Utilization of Hunan Province, Hunan Agricultural University, Changsha, China
College of Bioscience and Biotechnology, Hunan Agricultural University, Changsha, China
National Institute of Agrobiological Sciences, Ibaraki305-8602, Japan,
Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Japan,
Japan Biological Informatics Consortium, Tokyo 135-0064, Japan,
Okayama University Graduate School of Medicine,Dentistry and Pharmaceutical Sciences, Innovation Center Okayama for Nanobio-targeted Therapy, Okayama 700-8558, Japan,
Department of Biological Sciences, Tokyo Metropolitan University, Tokyo 192-0397, Japan,
Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Shizuoka 411-8540, Japan,
Institute of Botany, Academia Sinica,Taipei 11529, Taiwan,
Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200233,China,
Cold Spring Harbor Laboratory, NY 11723,USA,
European Bioinformatics Institute, Wellcome Trust Genome Campus, Cambridge, CB10 1SD, UK,
Graduate School of Information Science and Technology, Hokkaido University, Hokkaido 060-0814,Japan,
Department of Plant Molecular Biology,University of Delhi South Campus, New Delhi 110021,India,
National Research Centre on Plant Biotechnology, Indian Agricultural Research Institute,New Delhi 110012, India,
Institute for Bioinformatics/MIPS, GSF National Research Center for Environment and Health, D-85764 Neuherberg, Germany,
Institute of the Society for Techno-innovation of Agriculture, Forestry and Fisheries, Ibaraki 305-0854, Japan,
Crop Research Informatics Laboratory, International Rice Research Institute, Metro Manila, Philippines,
Department of Biology, McGill University, Quebec H3A 1B1, Canada,
Tsukuba Division, Mitsubishi Space Software Co., Ltd., Ibaraki 305-0032, Japan,
Centre for Comparative Genomics, Murdoch University, Western Australia 6150, Australia,
Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan,
National Center for Biotechnology D1032 Nucleic Acids Research, 2008, Vol. 36, Database issue Information, National Institutes of Health, MD 20894,USA,
Pohang University of Science and Technology,Pohang 790-784, Korea,
RIKEN BioResource Center,RIKEN Tsukuba Institute, Ibaraki 305-0074, Japan,
Waksman Institute of Microbiology, RutgersUniversity, NJ 08854,
Stanford University MedicalCenter, CA 94305-5120, USA,
Swiss-Prot Group, Swiss Institute of Bioinformatics, Geneva 1206, Switzerland,
Research articles
Xianwen Zhang, Jiaping Li, Ailing Liu et al.Expression Profile in Rice Panicle: Insights into Heat Response Mechanism at Reproductive Stage[J]PLOS. ONE 2012 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0049652#pone-0049652-g010
Structured Information
| Gene Name |
Os01g0112400 |
|---|---|
| Description |
Major intrinsic protein family protein |
| Version |
NM_001048348.1 GI:115434109 GeneID:4326119 |
| Length |
1125 bp |
| Definition |
Oryza sativa Japonica Group Os01g0112400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:644598..645722 |
| Sequence Coding Region |
644732..645418,645524..645697 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:644598..645722 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:644598..645722 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacaacggatcatgccgggaagaaagtcgacgtcgtcgtggttggcaacgttgacggcgagcacgtcggagtagagcaagctcgccatgatctgcacgaggaggcggcggcggcggcggcggctgaccatcatgccaccagaggcctagccattggctttctcatacgagaggtgatggtggaggggttggcgtcgttcttggtggtgttctggtcgtgcgtggcggcgctgatgcaggagatgtacgggacgctgacgttcccgatggtgtgcctggtggtggcgatgacggtggcgttcgttctcagctggctcggcccggcgcacttcaacccggccgtcaccatcaccttcgccgcctaccgccgcttcccggtctggcccaagctgccgctctacgtcgccgcccagctcgccggctcgctcctcgcctgcctctccgtcaacgccgtcatgaggccgcgccacgaccacttctacggcacggcgcccgtcgtcgtccacggcacccgcctccccttcctcatggagttcctcgcctccgccgtcctcatgatcgtcatcgccaccgtcgccaccgacggcacagcggggaagacggtgggagggatcgccatcggagcggcggtgggagggctggggctggtgatcgggccggtgtcgggagggtcgatgaacccggcgaggacgctggggccggcgatcgtgctgggcaggtacgacggcgtgtggatctacgtggtggcgcccgtcgccgggatgctggtcggcgcgctctgcaaccgcgccgtcaggctctcccaccgcatcgtcgccttcctctgcggcacctctgttgggatcgccggctcgccctag</cdnaseq> |
| Protein Sequence |
<aaseq>MTTDHAGKKVDVVVVGNVDGEHVGVEQARHDLHEEAAAAAAADH HATRGLAIGFLIREVMVEGLASFLVVFWSCVAALMQEMYGTLTFPMVCLVVAMTVAFV LSWLGPAHFNPAVTITFAAYRRFPVWPKLPLYVAAQLAGSLLACLSVNAVMRPRHDHF YGTAPVVVHGTRLPFLMEFLASAVLMIVIATVATDGTAGKTVGGIAIGAAVGGLGLVI GPVSGGSMNPARTLGPAIVLGRYDGVWIYVVAPVAGMLVGALCNRAVRLSHRIVAFLC GTSVGIAGSP</aaseq> |
| Gene Sequence |
<dnaseqindica>305..991#26..199#gaatgagatactaattaatactgaaatgacaacggatcatgccgggaagaaagtcgacgtcgtcgtggttggcaacgttgacggcgagcacgtcggagtagagcaagctcgccatgatctgcacgaggaggcggcggcggcggcggcggctgaccatcatgccaccagaggcctagccattggctttctcatacgagaggtaggtacatataatgtctgcaaatttatgattaattgatacacataaaaccctttgcatgaattgaattgaaccgatgaatggatggcaatggcgatggagcaggtgatggtggaggggttggcgtcgttcttggtggtgttctggtcgtgcgtggcggcgctgatgcaggagatgtacgggacgctgacgttcccgatggtgtgcctggtggtggcgatgacggtggcgttcgttctcagctggctcggcccggcgcacttcaacccggccgtcaccatcaccttcgccgcctaccgccgcttcccggtctggcccaagctgccgctctacgtcgccgcccagctcgccggctcgctcctcgcctgcctctccgtcaacgccgtcatgaggccgcgccacgaccacttctacggcacggcgcccgtcgtcgtccacggcacccgcctccccttcctcatggagttcctcgcctccgccgtcctcatgatcgtcatcgccaccgtcgccaccgacggcacagcggggaagacggtgggagggatcgccatcggagcggcggtgggagggctggggctggtgatcgggccggtgtcgggagggtcgatgaacccggcgaggacgctggggccggcgatcgtgctgggcaggtacgacggcgtgtggatctacgtggtggcgcccgtcgccgggatgctggtcggcgcgctctgcaaccgcgccgtcaggctctcccaccgcatcgtcgccttcctctgcggcacctctgttgggatcgccggctcgccctagctaccacactagagcttagccctccatatatatatccacagaataattcgcctccattatgatagctgcatgaacacgacgagcatcgctgcactgaaattgttttggaccaaccaatagagattttccatccc</dnaseqindica> |
| External Link(s) |
