Os04g0463400
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Contents
Annotated Information
Function
OsVIT1 and OsVIT2 may function primarily in flag leaves to mediate vacuolar sequestration of Fe and Zn, due to highly expression levels of OsVIT1 and OsVIT2 in flag leaves rather than embryos. And they might also mediate allocation of Fe/Zn between flag leaves and the grains[1]. Knockdown of the vacuolar Fe transporter gene OsVIT1 or OsVIT2 may be useful to further increase the Fe concentration of seeds [2].
Expression
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Evolution
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Labs working on this gene
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References
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Structured Information
| Gene Name |
Os04g0463400 |
|---|---|
| Description |
Protein of unknown function DUF125, transmembrane family protein |
| Version |
NM_001059545.1 GI:115458819 GeneID:4336075 |
| Length |
2850 bp |
| Definition |
Oryza sativa Japonica Group Os04g0463400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:23532796..23535645 |
| Sequence Coding Region |
23532960..23533260,23533526..23533640,23533773..23533858,23535286..23535542 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:23532796..23535645 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:23532796..23535645 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcgacggacggcggggggctgccgctgctggcggacaaggcggcgagccacagccaccaccaccacccggagcggcacttcacgtcgggggaggtggtccgcgacgtcatcatgggcgtctccgacggcctcaccgtgcccttcgccctcgccgcggggctctccggcgccagcgcgccatcctcgctcgtgctcaccgccggcctcgccgaggtcgccgccggcgccatctccatgggcctcggagggtatctcgcggccaagagcgaggcagaccattaccagcgggagatgaaaagggagcaggaggagatcatcgccgtcccggacactgaggctgctgagattggcgagatcatgtcgcagtacgggctcgaaccgcatgagtatggccctgtcgtggacgggctccgtaggaatcctcaagcttggctcgacttcatgatgaggtttgagctgggattggagaaaccagaccctaaaagagctatacagagcgctttaacaattgcgctatcttatgtcattggtggactggtccctctccttccctacatgtttatctccacagcacagaacgccatgctcacatctgtcggtgtcacgctggttgcactacttttctttggatacatcaagggtcgctttactggaaaccgtccattcctcagcgctgtccaaactgctattatcggtgcgcttgcttctgctgcggcatatggaatggccaaggccgtgcaaactagatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAATDGGGLPLLADKAASHSHHHHPERHFTSGEVVRDVIMGVS DGLTVPFALAAGLSGASAPSSLVLTAGLAEVAAGAISMGLGGYLAAKSEADHYQREMK REQEEIIAVPDTEAAEIGEIMSQYGLEPHEYGPVVDGLRRNPQAWLDFMMRFELGLEK PDPKRAIQSALTIALSYVIGGLVPLLPYMFISTAQNAMLTSVGVTLVALLFFGYIKGR FTGNRPFLSAVQTAIIGALASAAAYGMAKAVQTR</aaseq> |
| Gene Sequence |
<dnaseqindica>2386..2686#2006..2120#1788..1873#104..360#aaataaaccacctcttcaaacgtgcgtcgcctgaccgcttccatccatccaccagtctcgcttcttcgtgtctacggtctacctcggcgagtcggcggcggcgatggcggcggcgacggacggcggggggctgccgctgctggcggacaaggcggcgagccacagccaccaccaccacccggagcggcacttcacgtcgggggaggtggtccgcgacgtcatcatgggcgtctccgacggcctcaccgtgcccttcgccctcgccgcggggctctccggcgccagcgcgccatcctcgctcgtgctcaccgccggcctcgccgaggtcgccgccggcgccatctccatgggcctcggagggtaaacattaaacactcatcatctctctgtgtgttccttgtccatgcattgcacccctgaatccctgattaatctagcgaagttagcaatatgtcagtttcgtcgtatagatttgctcttcttttcttttttttttaaagaggggttccgagtttttcattaccaaaacaggaaacccagcggcagggtgcagtagtatgtcagtgaatacaatagaaagctttcggggacccacaggccacagcccataacatgatactagtaatttattaatcacctgaaatcggaatgtactgcagtatgatcatgatgaaacaaaaaattttgatacgccatgcacgcatatatttgctcgtacaattatcgggttccgtcttttgcagagacgcttaacacgtgtctgcgagaataggaaacaattcatacgattggtttgtccaatgatttttacaagatcctatgaaatcataaataatgatttataaaaaaatcctatggaatttctttcaaacaaaaggatctcttaagatgagatgaagattaagtttttcacgcaaaacttttggtattaacatataattgattgagttttaattattacaaacttgaaaaatagattaatatgatattttagagcaagtttcctatagaaagttttcacacgaaacgtacgttaagcaatttgaaaaacgtgccaaaaaattttaatgttcatccaactcttgttggagaaaagaacgagattgtctacggtttttttccctacagcctagaatattttccacgaccttgtagaacaggggagatgtggacaaggcataagcagtacagagtggagactgactggagagatggttgtaaatcgtattaggcgctcgcgcttaaaacatattacttgctgaatataagaagtggagtaatggattaataaaaaaaatggccagcaagcaagttaccgtgctcttggctgttttaatgggagttaggtatgcctgcctgaatatactcacagattcacaggtgtacttgctgaatattgccttgttacctcatgaaaaatcaattaggaaagcccatagtgttcgttgctctgcagattgtgcacggcgtatctgaccttctctgttctttgcctagctcccacccctacagtcccagttgcagattactcctgtcatccaaagcccgaaaaaggagtaattaaagtaaagttagctcgtgatggacacgtgtgtggccctataccacgtgctgttccagcacactttgtgttagtgtcacaacttttaggcctaagaaagtggagaataatactttcccccctttaaactgggaacaagacaagatcacattgttttcaaatcgaaaaaaggcgcgcgcaattgcacaaacgcatgacacttacccgcaattgcaccatgtggtaggtatctcgcggccaagagcgaggcagaccattaccagcgggagatgaaaagggagcaggaggagatcatcgccgtcccggacactggtaagccgataagcagatacaacaagataccatatgctgagacatgtcgctaagattcctcccatctgcgaccagcaggaaagctgcctcactttgtttaaaaaacttttggtttcctggttgatcgatcagaggctgctgagattggcgagatcatgtcgcagtacgggctcgaaccgcatgagtatggccctgtcgtggacgggctccgtaggaatcctcaagcttggctcgacttcatgatgaggtaatatgaccaactgttgctactccctttgtcaatctcttcatcagttatactagaaagcaaatgttgatgtcctgatggtgtctgagatactaatcagaaatgtttcgattatcctgtatgcgtttgccatagctcatataagaagctttcaacaatgaaaaccacacatatattagtaaacagcaagatttcaatcatataaaatataaaaattgatttggaattatcaaaccaacttaactaaccagagcaatgtatgcaggtttgagctgggattggagaaaccagaccctaaaagagctatacagagcgctttaacaattgcgctatcttatgtcattggtggactggtccctctccttccctacatgtttatctccacagcacagaacgccatgctcacatctgtcggtgtcacgctggttgcactacttttctttggatacatcaagggtcgctttactggaaaccgtccattcctcagcgctgtccaaactgctattatcggtgcgcttgcttctgctgcggcatatggaatggccaaggccgtgcaaactagatgatttgaaccctcatgtgttcctgtctgaagtttcagtaggcagaactgaatccaacgaagctgcaatgaatcacaatctcatattaagaatatgtattttacctttcatgtaacaaggaataaattttgggaaacatgaaataaaagcatgctattttaagttct</dnaseqindica> |
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