Os03g0133300

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0133300| Description = Conserved hypothetical protein| Version = NM_001055409.1 GI:115450546 GeneID:4331522| Length = 5072 bp| Definition ...")
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Gene Name

Os03g0133300

Description

Conserved hypothetical protein

Version

NM_001055409.1 GI:115450546 GeneID:4331522

Length

5072 bp

Definition

Oryza sativa Japonica Group Os03g0133300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1851627..1856698

Sequence Coding Region

1851859..1851911,1852190..1852231,1852508..1852599,1852739..1852932,1853416..1853455
,1853621..1853702,1854859..1854936,1855031..1855156,1855431..1855552
,1855905..1855944,1856137..1856211,1856301..1856472

Expression

GEO Profiles:Os03g0133300

Genome Context

<gbrowseImage1> name=NC_008396:1851627..1856698 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1851627..1856698 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaccctccccctcgcctccgggctcccaccaccgccgccactgagccagtccgcagcctcaccgcaatgccgtcactccccttcccttctcctcgttctaggaggcagtggaaacaacagaatttctatccacggtgcacgccaagagggccagctcctcaatcccgtgatactccgccgaagagagacactggtattgctagtgagaaggaatggggaatcaaccttctggatgaagcagtcaaggagtctgggacaaatgaagatggaagcacctggtacagggagagtggagacgatcgtggtgataatgggtacaggtgtcgctgggctaggatgggaggacagagtcatgatggtaccactgaatggaaagagacgtggtgggagaaaagtgattggaccggatataaggagttaggtgcggagaagtctggaaagaatggtgaaggtgattcttggtgggagaaatggaaagaagttctttaccaagatgaatggagcaatcttgcaagaatagagaggagcgctgaaaagcaagcgaaatcaggagcagaaaatgctgggtggtatgaaaaatggtgggagaaatatgatgccaaaggctggacagaaaaaggtgctcataagtacggaagattaaatgaacaatcctggtgggagaggtggggtgaacattatgatggccggggttttgtattgaaatggacagataagtgggcagagacagacttaggcaccaaatggggggacaaatgggaagagaaattctttgctggaattggttctcgacaaggggagacatggcatgtatcccctggtggagatcgatggtcaagaacttggggagaagagcattttggtaatggaaaagttcataaatacggcaagagcacaactggcgagagctgggatttggtagttgatgaggagacgtactacgaggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgatacaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagcgcttcatctccagctccaccttcggatgatccaccaggcatgcctccttcgcctctggaatga</cdnaseq>

Protein Sequence

<aaseq>NPPPRLRAPTTAATEPVRSLTAMPSLPFPSPRSRRQWKQQNFYP RCTPRGPAPQSRDTPPKRDTGIASEKEWGINLLDEAVKESGTNEDGSTWYRESGDDRG DNGYRCRWARMGGQSHDGTTEWKETWWEKSDWTGYKELGAEKSGKNGEGDSWWEKWKE VLYQDEWSNLARIERSAEKQAKSGAENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQS WWERWGEHYDGRGFVLKWTDKWAETDLGTKWGDKWEEKFFAGIGSRQGETWHVSPGGD RWSRTWGEEHFGNGKVHKYGKSTTGESWDLVVDEETYYEAEPHYGWADVVGDSTQLLS IQPVERPPGVYPTIDFSASSPAPPSDDPPGMPPSPLE</aaseq>

Gene Sequence

<dnaseqindica>233..285#564..605#882..973#1113..1306#1790..1829#1995..2076#3233..3310#3405..3530#3805..3926#4279..4318#4511..4585#4675..4846#agcatccttcgtcttcttcccaagccccatgttcttctccttcctcctcatcgccactcctctcccccacctgcaaagatctcccacccctaaacaaatccaaataaaagccccgaaaaaaaaggcttgctcatttatgtctcctcatttccgcgagctgattcgcaatcaatcgctctctcgctggttcggatgatgcccgcggtttccctcttcgccaccgcccctttaaaaccctccccctcgcctccgggctcccaccaccgccgccactgagccagtccgccgccgccgccgccgctcctgaagccctcgccgtggcatgagaagatggccgcgtgctccagggggctcgtggcgcggccgttcgatctgaccgcgaggggggcggcgcactggccgtgccccgccccgcgacgccgcgcgatccgatgctgctgccgcgcgcagcaggagccgcggaggcgcctctccaaggccgcggcggccgcgccggagcgcaccgaggagtggcgcatcgacgggaacaagcccgccgctgccgcccggggcaggcgtcgcgccagcctcaccgcaatgccgtcactccccttcccttctcctcggtacgtgcacggcggctcgtcactgaacatggcccatttttctgccttatccagtcaggcctcgcatttgccacttacagtaacatgttgtctaatcattccaacatatggattgttttttgctttatgctgaattgtcgtagtgacaagttaatgtgccaatgcttttgacacacgctttatgtagtggaataaaccgtacctttctgctgttgcacgaatgctctttgttcagagaatgaattttgatggtagactttgttttcactagtatagttctaggaggcagtggaaacaacagaatttctatccacggtgcacgccaagagggccagctcctcaatcccgtgatactccgccgaagagaggtgggttccttgctgatacttccaaattttgtgatagacatagtgtactccaaaaggaaacacccgacccgcagttccaagtgtatttttcagctttgctaaggaaatgcatttgttttctttgccacctgccttatagacactggtattgctagtgagaaggaatggggaatcaaccttctggatgaagcagtcaaggagtctgggacaaatgaagatggaagcacctggtacagggagagtggagacgatcgtggtgataatgggtacaggtgtcgctgggctaggatgggaggacagagtcatgatggtaccactgaatggaaagagacggtatgttcttgttgttttacccttaactgataatattctagtacaaatttatcaagttgtatacctttgtatgatgcacctgagttaagagttaccatctcagttttgtgcaaacaccacattttcgtatgagaaggatctagaaaagatttctgggatgtagccattatattccaatgacttctttatgtaacttctgatgctaatgagctgttgttgatgcttgtggcactagttagaatcgaagatatgtctgccatcctgcaagttgcttcgtgcttgttccaatagctatagcgcactctgcaatagatccaacttgcactttcttacttgactgagaatagggatttggaattataatctcccaggatttcataggccgtagctaactcttttggcacattaatcaatgctggacagaattcttgagttgttaaaaagattttttctaacagatctcaataatttattatgtggcagtggtgggagaaaagtgattggaccggatataaggagttaggtatgaacatatctttataatgaaggctctggtagcaaatggtctttgtaatttgttgttaaatttcctaagaattcagttaattttcttatttatgtgtgcccttttccttttgcatatctgatcagccgtcgttgacttttcattacaaatctctcacattaggtgcggagaagtctggaaagaatggtgaaggtgattcttggtgggagaaatggaaagaagttctttaccaagatgaatggaggtaaattattagcatgcaaattcatttttttaatgatactagctccttgcttaaataatacaaaaatacataatctccactgaattttaactaattttgtcaccaaaaataagtttactgttctttgtttctgcctgctgaagaaaacaattgtttggggaggggggggggggaggacaattgttgaccccttggttatacttctgtgaacaaagaactttgattgtgttaagcgcttggcgcttgcaatttcttgttgtctgtttggaacaattttgtttgaccatatatccatgctctatttacttatatttgaaatttagcacattattgactgttattaccagacatggctatacacttcaacttggacttttggacacatcatatgtgcaccaattatcgattagcatgcattattttcttattcctcttatggccttctagtacctttgtttgaaggaaacttgttctgtgggctcaactgctttaggattgttcaatttagtttgaacaataactgtctagaaccaaaacagcataagctctcctgtggattgggatatttgacacgaatatccagtgaaaatcacagtgctgattcataaattatcctgttcagagagtagttctaatttctaaacatactgggcacataatatatttctggcttagtgttatgatcataatgatctgtacttttgagtaaaggtcctgaattctctttaagatagggaaattaaagcaaactaggtgataccccgcgctttgctgcgggattcacgaatgagtatatgttaaatattgtcgaaatgatgaaagttgaaatgttaaaaaaataatatgaggaagatgatttgatacatacttgttgatctctataatataatattatagatgatatgtcatgcttgcatgggatttaaaataggctagaatagtaattgctagtgagtgaaaatgtggcatgcttgcatgggattttaaatgggttagaatagtaatggctagtggatgatgatgtggcatgcttgcatgtttagctttagctttagtgggtaccaactatatagaaagtatagattagttaataaatgaccatctagcacaacattgtaaactgtagatcataacatgatttacattgtgcaaacagcaatcttgcaagaatagagaggagcgctgaaaagcaagcgaaatcaggagcagaaaatgctgggtggtatgaaaaatggtgagagttatctcaggctttcgtttaggtttggttgcaattgttctgcaaaatatttgcttgaactgttgaagtgttcatgtttctttcctaggtgggagaaatatgatgccaaaggctggacagaaaaaggtgctcataagtacggaagattaaatgaacaatcctggtgggagaggtggggtgaacattatgatggccggggttttgtattgaaatggtgagcctatatatatagtgctattttgcagactattgttatactgtactttagtttatcttcaagcactataccatacactttacattgtattacatgtttcttatgctgcgcgcattgtggcctaaatttgtagtctaggttgtgcatttacattgtgcatcatatttgaggcacaagttctttatacttttaatttatttgcctgttcaatcatgattggaacatccgatgtatgttaattggtaaccactgcaattcatttgtattacaggacagataagtgggcagagacagacttaggcaccaaatggggggacaaatgggaagagaaattctttgctggaattggttctcgacaaggggagacatggcatgtatcccctggtggagatcgtaagtttcatcgtcatttatatatatgcacagtatccaccttgatgatgggctttgttctctttggatgctggtattaggcataaatgctaagcacctttggacctttgatgcatagaaaaagtttgcctgctgcattggccgaaattcacactggtgcaatctattggaagctatgctggatattttaacatgttgcttttatatatgagctgtatctactgtctgcatactcaggtttagaagttagatcctgtttattgcattgttaaatgtgtgcaccgctcgtagtgtgacttatgacttatctgatttccaattgccatccacttatctgatttgatactttcaggatggtcaagaacttggggagaagagcattttggtaatgggtatgttccatcatgacgctggtctcgcatttggtttgactgacacttgacattaataaatgaattgaaaccacatgggcttgtccttttctaatacactatatgtcattctgcaatggttcttcttgcaacgatactacctggcattacagtagtagctttcttagatactgttgttctcttgtatttcagaaaagttcataaatacggcaagagcacaactggcgagagctgggatttggtagttgatgaggagacgtactacgagtaagattatgtcttgtttggttcttccagacatcttcggagtattttcagatttacaatttggcgttgatctgtgcattgtcaattagggcggagcctcattacggatgggctgatgtcgttggagactcaacacaacttctgtcgatacaacctgtcgaaaggccaccaggagtgtacccaactattgacttcagcgcttcatctccagctccaccttcggatgatccaccaggcatgcctccttcgcctctggaatgagtcatacctgtgccagtacaaaagagaagcttttctgcataggtttccaattttgcctgtaaggggaacattctttgtagaaaggggatcaaccgcagtattgcgttcattggttcattcattctttcgtagcatgttttccttccgcggcttagcgttttatcgttccggactgctgtttgatcaattaggcgaaataatcagtggctcgcgatcatattgtctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0133300, RefSeq:Os03g0133300