Os03g0133500

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0133500| Description = Similar to Adenosine monophosphate binding protein 1 AMPBP1| Version = NM_001055411.1 GI:115450550 GeneID:4331524| L...")
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Gene Name

Os03g0133500

Description

Similar to Adenosine monophosphate binding protein 1 AMPBP1

Version

NM_001055411.1 GI:115450550 GeneID:4331524

Length

2037 bp

Definition

Oryza sativa Japonica Group Os03g0133500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:1860378..1862414

Sequence Coding Region

1860586..1862040,1862132..1862329

Expression

GEO Profiles:Os03g0133500

Genome Context

<gbrowseImage1> name=NC_008396:1860378..1862414 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:1860378..1862414 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggctgtatgccgagcgatgcaaactacgcgccgctcaccccggtgagcttcttggagcgcgccgccgtcgtgtacggtgaccgcacggccgtcgtctctggcggcagggagtactcgtggcgcgagacgcgggaacggtgcctcgctggggcgtccgcgctcgcgcgcctcggcgtcggccgccgggacgtggtcgccgtcatcgcagcgaacattccggcgatgtacgagctgcacttcagcgtgccgatggccggcggcgtgctctgcacgctgaacacccggcacgacgcggccatggtgtccgtccttctcagacattcggaggccaaggttttcctcgtcgaatcgcagttcctcgccgtcgcccacgacgccctgaggctgctcgccgatgctaaagccaaatttccccttgtcatcgcgatctccgacaccggcgacagcagcagcagcgacggtggcgggctagagtacgaggcgcttctgagggacgcgccgcggggcttcgagatcaggtggccggccgacgagcgcgacccgatatcgctcaactacacgtcggggacgacgtcgaggccgaagggcgtcatctacagccaccgcggcgcgtacctgaactcgctggccgcgctgctctgcaacgacatgacgtccatgccggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgcatggcgtgggccacggcggcgcagggcgggacgaacatctgcgtcaggaacgtcgtgcccaaggtcatcttcgagcagatcgtgcgccacggcgtgaccaacatgggcggcgcgcccacggtgctcaacatgatcgtgaacgcgccggcgtcggagcggaggccgctgccgaggagggtgctcatctcgacgggcggcgcgccgccgcctccgcaggtgctggccaagatggaggagctcggtttcaacgtccagcacgggtacggcctcaccgagacgtacgggccggcgacgcggtgcgtgtggagacccgagtgggacgcgctgccgctcgccgagcgcgcgcggatcaaggcgctccagggggtgcagcaccagatgttgcaggacgtcgacatcaaggacccggtgaccatggcgagcgtgccgtccgacgggcgcgccgtcggcgaggtcatgctccgcggcaacacggtcatgagcgggtactacaaggacgcggcggccacggaggaggccatgcgcggcgggtggctgcgcacgggcgacctcggcgtgcgccaccctgacgggtatatccagctcaaggatcgcgccaaggacatcatcatatcgggcggcgagaacatcagctcgatcgaggtggagtcggtgctgttcggccaccacgcggtgctcgacgcggcggtggtggcgaggccggacgaccactggggcgagacggcgtgcgcgttcgtcacgctgaaggacggggcaagcgcgacggcgcacgagatcatcgcgttctgccgtgcgcggctgccgcgttacatggcgccgaggacggtggtgttcggcgacctgcccaagacgtcgacggggaagacgcagaagttcttgctccgggagaaggccagggccatgggaagcctgcctatgcaaagcaaatccaagttgtag</cdnaseq>

Protein Sequence

<aaseq>MEGCMPSDANYAPLTPVSFLERAAVVYGDRTAVVSGGREYSWRE TRERCLAGASALARLGVGRRDVVAVIAANIPAMYELHFSVPMAGGVLCTLNTRHDAAM VSVLLRHSEAKVFLVESQFLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDGGGLE YEALLRDAPRGFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLCND MTSMPVYLWTVPMFHCNGWCMAWATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGA PTVLNMIVNAPASERRPLPRRVLISTGGAPPPPQVLAKMEELGFNVQHGYGLTETYGP ATRCVWRPEWDALPLAERARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVML RGNTVMSGYYKDAAATEEAMRGGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISS IEVESVLFGHHAVLDAAVVARPDDHWGETACAFVTLKDGASATAHEIIAFCRARLPRY MAPRTVVFGDLPKTSTGKTQKFLLREKARAMGSLPMQSKSKL</aaseq>

Gene Sequence

<dnaseqindica>375..1829#86..283#ggattgcattagttgcaattggttcttcttcagagaggctaattagtgtgacaaatcgatcccgattgctggtacacgagctgccatggaaggctgtatgccgagcgatgcaaactacgcgccgctcaccccggtgagcttcttggagcgcgccgccgtcgtgtacggtgaccgcacggccgtcgtctctggcggcagggagtactcgtggcgcgagacgcgggaacggtgcctcgctggggcgtccgcgctcgcgcgcctcggcgtcggccgccgggacgtggtaagtgatcgaccagagcttgatgcctcgatgagctttgtacttggtgccaattcagctctcaacaagacatgggttaattgctggtcaggtcgccgtcatcgcagcgaacattccggcgatgtacgagctgcacttcagcgtgccgatggccggcggcgtgctctgcacgctgaacacccggcacgacgcggccatggtgtccgtccttctcagacattcggaggccaaggttttcctcgtcgaatcgcagttcctcgccgtcgcccacgacgccctgaggctgctcgccgatgctaaagccaaatttccccttgtcatcgcgatctccgacaccggcgacagcagcagcagcgacggtggcgggctagagtacgaggcgcttctgagggacgcgccgcggggcttcgagatcaggtggccggccgacgagcgcgacccgatatcgctcaactacacgtcggggacgacgtcgaggccgaagggcgtcatctacagccaccgcggcgcgtacctgaactcgctggccgcgctgctctgcaacgacatgacgtccatgccggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgcatggcgtgggccacggcggcgcagggcgggacgaacatctgcgtcaggaacgtcgtgcccaaggtcatcttcgagcagatcgtgcgccacggcgtgaccaacatgggcggcgcgcccacggtgctcaacatgatcgtgaacgcgccggcgtcggagcggaggccgctgccgaggagggtgctcatctcgacgggcggcgcgccgccgcctccgcaggtgctggccaagatggaggagctcggtttcaacgtccagcacgggtacggcctcaccgagacgtacgggccggcgacgcggtgcgtgtggagacccgagtgggacgcgctgccgctcgccgagcgcgcgcggatcaaggcgctccagggggtgcagcaccagatgttgcaggacgtcgacatcaaggacccggtgaccatggcgagcgtgccgtccgacgggcgcgccgtcggcgaggtcatgctccgcggcaacacggtcatgagcgggtactacaaggacgcggcggccacggaggaggccatgcgcggcgggtggctgcgcacgggcgacctcggcgtgcgccaccctgacgggtatatccagctcaaggatcgcgccaaggacatcatcatatcgggcggcgagaacatcagctcgatcgaggtggagtcggtgctgttcggccaccacgcggtgctcgacgcggcggtggtggcgaggccggacgaccactggggcgagacggcgtgcgcgttcgtcacgctgaaggacggggcaagcgcgacggcgcacgagatcatcgcgttctgccgtgcgcggctgccgcgttacatggcgccgaggacggtggtgttcggcgacctgcccaagacgtcgacggggaagacgcagaagttcttgctccgggagaaggccagggccatgggaagcctgcctatgcaaagcaaatccaagttgtagtcttgtactattgtactagctgcgattggttttgctgccaagatgacagcgccctgcacgactactccgatattttctgatgatacagtatttgggaagaccaacacggatgttgcataaattccgtgttaaaactgagtcaagtgcagcatcatgtaggatgcacttaaaagtaatcataaaaaagaatataccctcttattcgggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0133500, RefSeq:Os03g0133500