Os03g0137500

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0137500| Description = Similar to VDAC3.1| Version = NM_001055437.1 GI:115450602 GeneID:4331551| Length = 3773 bp| Definition = Oryza sati...")
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Gene Name

Os03g0137500

Description

Similar to VDAC3.1

Version

NM_001055437.1 GI:115450602 GeneID:4331551

Length

3773 bp

Definition

Oryza sativa Japonica Group Os03g0137500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2047794..2051566

Sequence Coding Region

2048230..2048276,2048932..2049001,2049091..2049201,2049713..2049799,2050025..2050233
,2050664..2050970

Expression

GEO Profiles:Os03g0137500

Genome Context

<gbrowseImage1> name=NC_008396:2047794..2051566 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2047794..2051566 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcaaaggcccagctccgttcctcaacattgggaagagagcaaaagatcttttgtacaaggactacaattttgaccaaaagttttctttaacgacaactagcaattctggtttgggtctaacagccaccggtgtgaagatagacgaactcttcatcggtgacatacagacacaacataaaagtggcaaaaccactgttgatgtcaagattgatagtgaatctagagtgtcaaccacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttcagggttcctgatcaaaagtccgggaagcttgatttgcaataccttcatgaccattttgcactgaattctaccattggtttgacatcaacgcctttaattgagctggcagcaactatcggcacgaatgaacttagtgctggtgctgaggttggattcgacagcacttcagcttctgttactaagtacaactcagggatctgctataacaaacatgatttttctgctgccgtactattggctgataaaggggagactttaaaagcttcttatatccacacgttcaatgaaaccaatggagctacagtggcggctgaagtaacgcacaagttaaaaacaaaagagaactatttcaccatcgggagctctcatgctattgattcttcgacgttgctgaagacaagatttagcaatggtggcaaagttggagttctctgtcagcatgagtggaggcccaagtctactgtaagtatttctgccgagtatgatcccaaagtggtgagttcgccttcaagattcggcgtggccatagccttgaagccttga</cdnaseq>

Protein Sequence

<aaseq>MSKGPAPFLNIGKRAKDLLYKDYNFDQKFSLTTTSNSGLGLTAT GVKIDELFIGDIQTQHKSGKTTVDVKIDSESRVSTTVTVDEALTGLKTSFSFRVPDQK SGKLDLQYLHDHFALNSTIGLTSTPLIELAATIGTNELSAGAEVGFDSTSASVTKYNS GICYNKHDFSAAVLLADKGETLKASYIHTFNETNGATVAAEVTHKLKTKENYFTIGSS HAIDSSTLLKTRFSNGGKVGVLCQHEWRPKSTVSISAEYDPKVVSSPSRFGVAIALKP </aaseq>

Gene Sequence

<dnaseqindica>437..483#1139..1208#1298..1408#1920..2006#2232..2440#2871..3177#ggcctctgacttccctacgttctcctctctctctcggcttccactcccgtctcctcgtctcctcgcgtgttcgcccgccgccctgcgccgaccagcgcagccgcagcggcgccggcgtcctgctgcttccgcccgcatcctcgccggtgagcacccgtacgcggcatccttgtccccgtctccctctacccacgccttctctctttgtccccaacctttagcttgccctctagatctggatgcttttcttttcgcctttgacctgagtctaaaagcaattttccgggggtttattttccatagatttctgcgggttcaatgcccccacgttggggattacatcatcccttggtttctcttgtgttgggaagataccgataatatgtttgtgcttttcctttgcaggtaagaggcagaatcacttcgttaggcaaggatgagcaaaggcccagctccgttcctcaacattgggaagagagcaaaaggcaagcagtgtctatgtctcggaagactgtagtttattttccgtctcgcttcgtgccactttgtgcattttgcgggtcaaattttgtttggtagtttaactttgttgtcttaaaaaaaattattagaagcagtgtgtgttttcttagtatctcttttatgctgctgtgtactgtctgtatgtgatacttttggcacaacttggaatccagtgaggtcaaatgactttgctgggtatcacaggatttatgtgatcatcattcgatgcgtcatactcgcagatttcatttaattattacaataatttgacatttaataccatagagaactgtcactgtatattgtatattgtcattgttcatccacatgtatggatcatgcataaagaaacagcagctcaattctgacggagacctaaatatcactgaatattctataggctgggatgcttattgcttacctgaacacatctattgatttacctcaatctttcatctttgtctttttatatctgatattctgatgtggtttggcaagtgcagataaattttattttttacatggttttctttgttatttaccttttcgctctgattttcgtgttgtcttaaacgactcacactttccactaacatatttgcttgttataccatatagatcttttgtacaaggactacaattttgaccaaaagttttctttaacgacaactagcaattctggtttggtaagggtttcactccttctgttcatggtttaatccctaccagaaatttgtgaagataccatgctcacagcttctacttttattaatagggtctaacagccaccggtgtgaagatagacgaactcttcatcggtgacatacagacacaacataaaagtggcaaaaccactgttgatgtcaagattgatagtgaatctagagtaagttccctgtgtttggctctctagtttagctatatttgtaaagcctgactttacttgtgtagcattagctattgttttgttgaacaatcggtgctattttttggtatttattattacatatcatgccatcaaaaagttatgccgtatgatatggagctaagttgcatgtatagaagatggtatgaagaaacatacgttgctactgacttaattagccattggatttcagtatggtatttagacatatatgaagcaacattcattgctacggacttaattagccattggatttcagtatggtatttagacatatatgaagcaacatacattgctacggacttaattagccattggattttagtatggtattttagaaatatagacttctgcacttgtgcatccataatactcgttcagtgccacgttttgcttaatctgtttctagtttgtcatctcagggctgtacgtcctgtatacctgtatctcactacagtcattctgtttacaggtgtcaaccacagtcactgttgatgaagcccttactggtctgaagacttcttttagcttcagggttcctgatcaaaagtccgggaaggttggtatattctgatatggtggaagaatatcatttttttccctcaaacatagaaattcagtggtgtttcagctaatttagttgaaccatatccaacttgtcctgacattgtgtttaccaatcccctgatggcttataaccaatatttttgtcttgtagttttctgtaatatttgcctttctgaatgttctactgtgctaatgcttagtcttttctcattggcagcttgatttgcaataccttcatgaccattttgcactgaattctaccattggtttgacatcaacgcctttaattgagctggcagcaactatcggcacgaatgaacttagtgctggtgctgaggttggattcgacagcacttcagcttctgttactaagtacaactcagggatctgctataacaaacatgatttttctgctgccgtactattgtaagtttcccgagtttctgctttgcttaagcatacaacagtctgcgctatgcacgtgcattgttccaatatcgtactcagttacatcgttgatttgcacttactgaagttaacccatatttttttcctataattcttgaaatataacatgaatgaacataagttttggtcatgattgatattttgagcttccaaagtggatgctctaaaggtgatgaacttgactgctacctatagttaaaacagcacgcaatagcactatttgtacgtaccagggcagcaacacaatataatgtgctggtatctgtacaatttatatgcaatatgttgttcttatgtcttcctgtatttgtcttctgcatattgtccctaagcaacatcacctttacccatgcactgataaatagtttctacaattgttaccacacagggctgataaaggggagactttaaaagcttcttatatccacacgttcaatgaaaccaatggagctacagtggcggctgaagtaacgcacaagttaaaaacaaaagagaactatttcaccatcgggagctctcatgctattgattcttcgacgttgctgaagacaagatttagcaatggtggcaaagttggagttctctgtcagcatgagtggaggcccaagtctactgtaagtatttctgccgagtatgatcccaaagtggtgagttcgccttcaagattcggcgtggccatagccttgaagccttgattatcacctcctgtacaagtgttagatacttcttgcccgtgtgcatcctagccatacttacgaaagctccaccattttatgcccgttttgtaagtgtcttggccgaagaaacgttgttgtcttggagttggtcttagttttgtggaaccctaccaccagccgacttcatcccgagaattgaaaatacagagagttttgtactggaaacaatagatttactgttttgctgcttcagaaactattcggtgtcgattgtacaccttgaagagccccccttgaagaagaatatcagggtaagtgactaagtgccacgttggtttgttgctgagccaaatgggagttggaaatgattcgatatctgcattattctgtgatgcagttttggttggcttgttgctgagccaaatgggagttagaaatgatttgatatctgtttttttatgcagttttggcatgctgatgtgcccttttttttcaattgtttgcagtgtaccatatggtcatttcaattgtttcaagagagtacactatttagacattgtactaacaatgttttgttctgatgctcatcaccgctaaatatagttaatctctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0137500, RefSeq:Os03g0137500