Os10g0155733
| Gene Name |
Os10g0155733 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001189101.1 GI:297727332 GeneID:9270526 |
| Length |
3554 bp |
| Definition |
Oryza sativa Japonica Group Os10g0155733, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 10:3479574..3483127 |
| Sequence Coding Region |
3479574..3482679,3482766..3483127 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008403:3479574..3483127 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008403:3479574..3483127 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcgcgccacctcctcctcctcctcgcgctcctcctcctcctcctcctcttcccgctcgccacgtccgcacagccgccgccgccgtcgaacacctccgcctccacctccgccgcggccgtcctcctctccttcctcgactccctcccacccgcctcccagcgcctcctcctcccgtcatggcggcaaagccgaagcagcagcagcagcggcaatgccaccgcgcctccaccgcactgcgcgtttcttggcgtcacatgctccgacaccggcgcggtggcggcgctcaacctctccggggtggggctcaccggcgcgctctccgcctccgcgccgcgcctctgcgcgctcccggcctccgcgctccccgtgctcgacctcagcgggaacggcttcaccggcgcggtccccgccgcgctcgccgcgtgcgccggggtcgccacgctcctcctcggcgggaacaacctctccggcggggttcccccggagttgctctcctcgcgccagctcgtcgaggtcgacctcaacggcaacgcgctcaccggggagatccccgcccccgccggctcgccggtggtgctcgagtacctcgacctcagcggcaactccctctccggcgccgtcccgccggagctcgccgcgctcccggatctccggtacttggacctcagcatcaaccggctcaccggcccaatgccggagttcccggtccactgccggctgaaattcctcggcctctaccgcaaccagatcgccggcgagctccccaagagcctcggcaactgcggcaacctcaccgtcttgttcctgtcctacaacaatctcaccggcgaggtgcccgatttcttcgcctccatgcccaatctgcagaagctctaccttgacgacaaccatttcgccggtgagttgccggcgagcattggtgagctggtgagcttggaaaagctggtggtgacggcgaacaggttcaccggaacaatcccggaaacaattgggaattgccggtgtttgattatgctgtacttaaacagcaacaacttcaccggctcaattccggcgttcatcggcaatttgagcagattggagatgttctcaatggcagaaaatggcattactgggagcattccacctgaaattgggaaatgccggcaattggttgaccttcaactccataagaacagcctcaccgggacgataccgccggagatcggtgagctaagccgattacagaagctctacctgtacaacaacttactccatggtccagttcctcaagcattgtggcgattggttgacatggtggagttgtttctcaacgacaacagattaagtggtgaggtacatgaagatatcactcaaatgagtaatctaagagagatcaccttgtacaacaacaacttcaccggcgagctgccacaagccctggggatgaacacaacatcagggcttcttcgtgtggacttcactcgcaaccgctttcgcggcgcaattcctccaggattgtgcacgagaggccagcttgccgttcttgatcttggtaacaaccagtttgatgggggcttttctagtgggatagcaaaatgtgagtctctatacagggttaatctgaacaacaacaagctcagtgggagcttgcctgcagatttgagcaccaacagaggtgtgacacacctcgacattagtggaaatctgctcaaagggaggatacctggtgcgcttggtttatggcacaatcttacaaggcttgatgtatctggcaacaaattctcaggtccaataccacatgaactcggggctctaagtattcttgacaccctgctcatgtcatcgaacaggctgaccggagcaataccacatgagttggggaattgcaagaggcttgcccatttggatcttggaaataaccttctcaatggaagtatacctgcagaaattacaacacttagtggcctgcaaaatcttttgcttggtggaaacaagctcgctggaccaattccggattctttcaccgcaacgcagagcctccttgagctgcaacttggtagcaataatttggaaggaggcatcccacagagcgtaggcaaccttcagtacatatcacaaggtctgaatattagcaataacagactaagcggcccaatcccgcacagccttggtaatcttcagaaactggaagtgctcgacttgtcaaataactcattatctggtcctattccatcgcagctaagtaacatgatctcactttctgttgtgaacatttcgttcaatgagctatctggtcagctccctgatggatgggataagattgcaacacggttacctcaagggtttctagggaatcctcagttgtgtgtaccatccggaaatgcaccttgcacaaagtatcaatctgcgaaaaacaaaagaaggaacacacaaattattgtggcattgctagtgtcaactcttgctttgatgattgctagtctggttattattcatttcattgtgaagaggtctcagcgtctatctgcaaatcgtgtatcaatgcgcaacctggactccaccgaagaattgccagaagacttgacatatgaagacattcttcgggccactgataactggagtgagaaatacgtcattggaagaggccggcatggcacagtctaccggactgagcttgcagttggaaagcagtgggcagtcaagacagttgatttgtcccagtgcaaattccctattgaaatgaagatattgaacacggtgaagcaccggaacattgtgaggatggctgggtactgcatccgtagcaacatcggcctaattctctatgagtacatgcccgaggggacactctttgagctattgcatgaaaggacacctcaagtgtcccttgactggaacgtccggcaccagatcgcccttggtgtggcggagagcttgtcctatcttcaccatgactgtgtgcccatgattatccatagagatgtcaaatcgagcaacatcctgatggatgctgagctagtacccaagctcacagattttgggatggggaagatcattgatgatgatgatgcagacgcgacagtgtctgtcgttgttggcacccttggttatattgctccagagcatggatactccacgagattaagcgagaagagtgatgtatacagttatggagtagtgcttcttgaactgttgtgtcggaagatgcctgtggatcctgcatttggagatggtgtggacattgtgacttggatggggtcaaatctgaatcaggcagatcactccaacatcatgaggttcctggatgaggagataatatactggcctgaacatgagaaggcgaaggtgttggacttgttggatttagcgatgacctgcactcaggtttcttgccagttaaggccatccatgagggaggtggtgagcatcttgatgaggattgagagaagtaatcacgttcagttctttgaagaagctccatga</cdnaseq> |
| Protein Sequence |
<aaseq>MSRHLLLLLALLLLLLLFPLATSAQPPPPSNTSASTSAAAVLLS FLDSLPPASQRLLLPSWRQSRSSSSSGNATAPPPHCAFLGVTCSDTGAVAALNLSGVG LTGALSASAPRLCALPASALPVLDLSGNGFTGAVPAALAACAGVATLLLGGNNLSGGV PPELLSSRQLVEVDLNGNALTGEIPAPAGSPVVLEYLDLSGNSLSGAVPPELAALPDL RYLDLSINRLTGPMPEFPVHCRLKFLGLYRNQIAGELPKSLGNCGNLTVLFLSYNNLT GEVPDFFASMPNLQKLYLDDNHFAGELPASIGELVSLEKLVVTANRFTGTIPETIGNC RCLIMLYLNSNNFTGSIPAFIGNLSRLEMFSMAENGITGSIPPEIGKCRQLVDLQLHK NSLTGTIPPEIGELSRLQKLYLYNNLLHGPVPQALWRLVDMVELFLNDNRLSGEVHED ITQMSNLREITLYNNNFTGELPQALGMNTTSGLLRVDFTRNRFRGAIPPGLCTRGQLA VLDLGNNQFDGGFSSGIAKCESLYRVNLNNNKLSGSLPADLSTNRGVTHLDISGNLLK GRIPGALGLWHNLTRLDVSGNKFSGPIPHELGALSILDTLLMSSNRLTGAIPHELGNC KRLAHLDLGNNLLNGSIPAEITTLSGLQNLLLGGNKLAGPIPDSFTATQSLLELQLGS NNLEGGIPQSVGNLQYISQGLNISNNRLSGPIPHSLGNLQKLEVLDLSNNSLSGPIPS QLSNMISLSVVNISFNELSGQLPDGWDKIATRLPQGFLGNPQLCVPSGNAPCTKYQSA KNKRRNTQIIVALLVSTLALMIASLVIIHFIVKRSQRLSANRVSMRNLDSTEELPEDL TYEDILRATDNWSEKYVIGRGRHGTVYRTELAVGKQWAVKTVDLSQCKFPIEMKILNT VKHRNIVRMAGYCIRSNIGLILYEYMPEGTLFELLHERTPQVSLDWNVRHQIALGVAE SLSYLHHDCVPMIIHRDVKSSNILMDAELVPKLTDFGMGKIIDDDDADATVSVVVGTL GYIAPEHGYSTRLSEKSDVYSYGVVLLELLCRKMPVDPAFGDGVDIVTWMGSNLNQAD HSNIMRFLDEEIIYWPEHEKAKVLDLLDLAMTCTQVSCQLRPSMREVVSILMRIERSN HVQFFEEAP</aaseq> |
| Gene Sequence |
<dnaseqindica>1..3106#3193..3554#atgtcgcgccacctcctcctcctcctcgcgctcctcctcctcctcctcctcttcccgctcgccacgtccgcacagccgccgccgccgtcgaacacctccgcctccacctccgccgcggccgtcctcctctccttcctcgactccctcccacccgcctcccagcgcctcctcctcccgtcatggcggcaaagccgaagcagcagcagcagcggcaatgccaccgcgcctccaccgcactgcgcgtttcttggcgtcacatgctccgacaccggcgcggtggcggcgctcaacctctccggggtggggctcaccggcgcgctctccgcctccgcgccgcgcctctgcgcgctcccggcctccgcgctccccgtgctcgacctcagcgggaacggcttcaccggcgcggtccccgccgcgctcgccgcgtgcgccggggtcgccacgctcctcctcggcgggaacaacctctccggcggggttcccccggagttgctctcctcgcgccagctcgtcgaggtcgacctcaacggcaacgcgctcaccggggagatccccgcccccgccggctcgccggtggtgctcgagtacctcgacctcagcggcaactccctctccggcgccgtcccgccggagctcgccgcgctcccggatctccggtacttggacctcagcatcaaccggctcaccggcccaatgccggagttcccggtccactgccggctgaaattcctcggcctctaccgcaaccagatcgccggcgagctccccaagagcctcggcaactgcggcaacctcaccgtcttgttcctgtcctacaacaatctcaccggcgaggtgcccgatttcttcgcctccatgcccaatctgcagaagctctaccttgacgacaaccatttcgccggtgagttgccggcgagcattggtgagctggtgagcttggaaaagctggtggtgacggcgaacaggttcaccggaacaatcccggaaacaattgggaattgccggtgtttgattatgctgtacttaaacagcaacaacttcaccggctcaattccggcgttcatcggcaatttgagcagattggagatgttctcaatggcagaaaatggcattactgggagcattccacctgaaattgggaaatgccggcaattggttgaccttcaactccataagaacagcctcaccgggacgataccgccggagatcggtgagctaagccgattacagaagctctacctgtacaacaacttactccatggtccagttcctcaagcattgtggcgattggttgacatggtggagttgtttctcaacgacaacagattaagtggtgaggtacatgaagatatcactcaaatgagtaatctaagagagatcaccttgtacaacaacaacttcaccggcgagctgccacaagccctggggatgaacacaacatcagggcttcttcgtgtggacttcactcgcaaccgctttcgcggcgcaattcctccaggattgtgcacgagaggccagcttgccgttcttgatcttggtaacaaccagtttgatgggggcttttctagtgggatagcaaaatgtgagtctctatacagggttaatctgaacaacaacaagctcagtgggagcttgcctgcagatttgagcaccaacagaggtgtgacacacctcgacattagtggaaatctgctcaaagggaggatacctggtgcgcttggtttatggcacaatcttacaaggcttgatgtatctggcaacaaattctcaggtccaataccacatgaactcggggctctaagtattcttgacaccctgctcatgtcatcgaacaggctgaccggagcaataccacatgagttggggaattgcaagaggcttgcccatttggatcttggaaataaccttctcaatggaagtatacctgcagaaattacaacacttagtggcctgcaaaatcttttgcttggtggaaacaagctcgctggaccaattccggattctttcaccgcaacgcagagcctccttgagctgcaacttggtagcaataatttggaaggaggcatcccacagagcgtaggcaaccttcagtacatatcacaaggtctgaatattagcaataacagactaagcggcccaatcccgcacagccttggtaatcttcagaaactggaagtgctcgacttgtcaaataactcattatctggtcctattccatcgcagctaagtaacatgatctcactttctgttgtgaacatttcgttcaatgagctatctggtcagctccctgatggatgggataagattgcaacacggttacctcaagggtttctagggaatcctcagttgtgtgtaccatccggaaatgcaccttgcacaaagtatcaatctgcgaaaaacaaaagaaggaacacacaaattattgtggcattgctagtgtcaactcttgctttgatgattgctagtctggttattattcatttcattgtgaagaggtctcagcgtctatctgcaaatcgtgtatcaatgcgcaacctggactccaccgaagaattgccagaagacttgacatatgaagacattcttcgggccactgataactggagtgagaaatacgtcattggaagaggccggcatggcacagtctaccggactgagcttgcagttggaaagcagtgggcagtcaagacagttgatttgtcccagtgcaaattccctattgaaatgaagatattgaacacggtgaagcaccggaacattgtgaggatggctgggtactgcatccgtagcaacatcggcctaattctctatgagtacatgcccgaggggacactctttgagctattgcatgaaaggacacctcaagtgtcccttgactggaacgtccggcaccagatcgcccttggtgtggcggagagcttgtcctatcttcaccatgactgtgtgcccatgattatccatagagatgtcaaatcgagcaacatcctgatggatgctgagctagtacccaagctcacagattttgggatggggaagatcattgatgatgatgatgcagacgcgacagtgtctgtcgttgttggcacccttggttatattgctccaggtgaaccctcttctcttcatatcaatcctgagctaatttatttttatttattttcagtattaacatgcttcatcatttttgcacagagcatggatactccacgagattaagcgagaagagtgatgtatacagttatggagtagtgcttcttgaactgttgtgtcggaagatgcctgtggatcctgcatttggagatggtgtggacattgtgacttggatggggtcaaatctgaatcaggcagatcactccaacatcatgaggttcctggatgaggagataatatactggcctgaacatgagaaggcgaaggtgttggacttgttggatttagcgatgacctgcactcaggtttcttgccagttaaggccatccatgagggaggtggtgagcatcttgatgaggattgagagaagtaatcacgttcagttctttgaagaagctccatga</dnaseqindica> |
| External Link(s) |
