Os03g0138500

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0138500| Description = Conserved hypothetical protein| Version = NM_001055444.1 GI:115450616 GeneID:4331558| Length = 1954 bp| Definition ...")
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Gene Name

Os03g0138500

Description

Conserved hypothetical protein

Version

NM_001055444.1 GI:115450616 GeneID:4331558

Length

1954 bp

Definition

Oryza sativa Japonica Group Os03g0138500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2102028..2103981

Sequence Coding Region

2102128..2102220,2102328..2102431,2102555..2103563,2103669..2103683

Expression

GEO Profiles:Os03g0138500

Genome Context

<gbrowseImage1> name=NC_008396:2102028..2103981 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2102028..2103981 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgcttccttggctgcttcgggggggccaaggagcgccgccgccgccggaaacgctcccctgcgcactccccctccggccgcgcccgggccacgccgcggctttccccgaagaaggctgccgctgccgccgcgttggatggagacgttgtttccgccgccgcgccgctgctggcgacgctcctggagttgagggattccactgatgacttgtgcttgaccgtcatcaagaagaaggtgacgtttgatcccaacgtcaccacttacgaggcggctgcgatcccggaggcggaggaggaggatgatgaggaggccgagccggcggcgggtgacgacaaggatgaggcgaggtggatgctggcaccggattgcgcgaaatccgaggctttcccgctgaaccacaggtacagcaactgcgcctacggcgacaatgacagcgagtacgacgaggacgaggacgaggacgaggaggaagacgaggacgaagaggaagaggcggatgggctcgacgagtgcgcgatcgacgacgaggacgacgacggccttctcggcatcgggcgcggcgaggacgaggcgtgcgagtcgctcttcctgcttccaatgagcaagactaaggagagcggcggcggccatgaagcggcttccggcgtcacctcgccggaggcgccgcccgcgcctcaacagacgcgcgacgcgaatccggtgctcagctcggtggagaatctcacccagtggaaggacgccaaggcccgcgccgccaccgccaccgccgcgccgaatgcttcggacaaggagaacagaacgacggcgaacttgctccccgagccggcgatcccagccaagaagagagagtggcaggtggtctgctccgactacagccccagcacgccaagcaagcaagaagtctcggtggacgcgagcctctcgacatggctgggctcttcggggacgccggagagcaactccgtccggtccttctcgccgatcagccgagaagaccggccgatccttggggccctgaccgtggaggacatcaagatatcctctgccaactcgtctccgaggaggtcgaggtctccgagcccgagccctgacgacatgcccatcctgggaaccgtgggggcttactggaattgcagctccaaggctggtgatccggtgacaagaggagggtttatgaggactagaacaaggtttgggcagaactttgcaggatga</cdnaseq>

Protein Sequence

<aaseq>MGCFLGCFGGAKERRRRRKRSPAHSPSGRARATPRLSPKKAAAA AALDGDVVSAAAPLLATLLELRDSTDDLCLTVIKKKVTFDPNVTTYEAAAIPEAEEED DEEAEPAAGDDKDEARWMLAPDCAKSEAFPLNHRYSNCAYGDNDSEYDEDEDEDEEED EDEEEEADGLDECAIDDEDDDGLLGIGRGEDEACESLFLLPMSKTKESGGGHEAASGV TSPEAPPAPQQTRDANPVLSSVENLTQWKDAKARAATATAAPNASDKENRTTANLLPE PAIPAKKREWQVVCSDYSPSTPSKQEVSVDASLSTWLGSSGTPESNSVRSFSPISRED RPILGALTVEDIKISSANSSPRRSRSPSPSPDDMPILGTVGAYWNCSSKAGDPVTRGG FMRTRTRFGQNFAG</aaseq>

Gene Sequence

<dnaseqindica>101..193#301..404#528..1536#1642..1656#gcttgcgttgcgccccaaattccgcctcctcttcttcactagctcttccaccctctccaatcccctctccctttctctccctctccctcttgccttcgccatgggctgcttccttggctgcttcgggggggccaaggagcgccgccgccgccggaaacgctcccctgcgcactccccctccggccgcgcccgggtacgtggcgtcaatccctttcctctctctgctctgttccgccatatccgtctgttcgtttcggagttctcctctaaattgtggttttggaatttgaatttgaacaggccacgccgcggctttccccgaagaaggctgccgctgccgccgcgttggatggagacgttgtttccgccgccgcgccgctgctggcgacgctcctggagttgaggtgtgtgttcgtgtgtgggcattgtggctgatctgatcagcgggatggcttgatttggtgcgggaattcgcttgatctggtgtgctgatttgtgggggtgttgatgtgtgtgtatctgtttagggattccactgatgacttgtgcttgaccgtcatcaagaagaaggtgacgtttgatcccaacgtcaccacttacgaggcggctgcgatcccggaggcggaggaggaggatgatgaggaggccgagccggcggcgggtgacgacaaggatgaggcgaggtggatgctggcaccggattgcgcgaaatccgaggctttcccgctgaaccacaggtacagcaactgcgcctacggcgacaatgacagcgagtacgacgaggacgaggacgaggacgaggaggaagacgaggacgaagaggaagaggcggatgggctcgacgagtgcgcgatcgacgacgaggacgacgacggccttctcggcatcgggcgcggcgaggacgaggcgtgcgagtcgctcttcctgcttccaatgagcaagactaaggagagcggcggcggccatgaagcggcttccggcgtcacctcgccggaggcgccgcccgcgcctcaacagacgcgcgacgcgaatccggtgctcagctcggtggagaatctcacccagtggaaggacgccaaggcccgcgccgccaccgccaccgccgcgccgaatgcttcggacaaggagaacagaacgacggcgaacttgctccccgagccggcgatcccagccaagaagagagagtggcaggtggtctgctccgactacagccccagcacgccaagcaagcaagaagtctcggtggacgcgagcctctcgacatggctgggctcttcggggacgccggagagcaactccgtccggtccttctcgccgatcagccgagaagaccggccgatccttggggccctgaccgtggaggacatcaagatatcctctgccaactcgtctccgaggaggtcgaggtctccgagcccgagccctgacgacatgcccatcctgggaaccgtgggggcttactggaattgcagctccaaggctggtgatccggtgacaagaggagggtttatgaggactagaacaaggtttgggcaggtaagcttagtgtcactgtcacacctagtttcgatgttgattctgaatttgtcatgtactggagcttcagttttacattttgagctgatgatgaatatcttgtagaactttgcaggatgaagtggtgaattgctactgaaagcttccaagctggaagctggaagagtttggtttcaggaggaaaattgcagaagatgcatacatgcttttgtgagaagaacatacatatagagtcagtgagattgtggaagtagtggcatgctttattcaaagatgttgcttgtcaaattcttttatttgttgtaaacaatgtccatccatattctattatggtgatctttttttttttggcgctgtcgatatggtgtattgtttcgatgttacattgtcaatatggtgtattgcacttatgcctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0138500, RefSeq:Os03g0138500