Os03g0138600

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0138600| Description = Protein of unknown function DUF810 family protein| Version = NM_001186327.1 GI:297721784 GeneID:9271469| Length = 34...")
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Gene Name

Os03g0138600

Description

Protein of unknown function DUF810 family protein

Version

NM_001186327.1 GI:297721784 GeneID:9271469

Length

3474 bp

Definition

Oryza sativa Japonica Group Os03g0138600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2104327..2107800

Sequence Coding Region

2104327..2105321,2105406..2105592,2105670..2107124,2107219..2107800

Expression

GEO Profiles:Os03g0138600

Genome Context

<gbrowseImage1> name=NC_008396:2104327..2107800 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2104327..2107800 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgcctccagcaccaccaccgctcccgctccgcctcctcctcctccttcgcgcgctcctccgacaccgccgccaccgacgccgacgcccgcagcctcgccgcggacgccaccgtcgactgccccttcggccacgtcaatggcctcacccgctccgacctccgggaggccgcctacgaggtcttcttcatgtcctgccgcgccgccggtggcggccggctcaactacttcccggccggggagagcggcggcggcgacgtgtcgccgaccatcggcgccggcccccggggtggcacggggatgagcgtcgtcaacagcagggtcaagagggcgctggggctcaaggcgcggaggtcgtcgcagccgaccacggcgcgggtgagctccatgaacgcgtcgtcggcgcccggctcccccggccgcgccatgtgggcgatgagccagccgtcgacgcccgtgtcgcccgggaaagggaggcggccgatgacctccgccgagatcatgcggcagcagatgcgtgtcacggagcagaacgacgcccgcctccgcaagacgctcatgcgcaccctcatcggccaggtgggaagaaaagccgagacgatcgtcttgcccctggaactgctccggcaggtcaagctcaccgacttcgccgacagcggcgagcaccaccagtggcagcgccggcagctgaagctcctcgaggccgggctcatcgcgcacccgtccctgccgcatgaccgcctcaacgcggtggtgctcaggttccgcgaggtcatgcaggcggcggacacccgcgccatcgacaccggcaagacgtcggacgccatgcaagccctctgcaacgccgtgcacgcccttgcctggcgctccgcccccggaagcaaggccgccggcggcgacgcctgccactgggccgacggctaccctctcaacgtgctcctctacgtgtcgctcctccaggccatctttgacctcaaggaggagaccgtcgtgctcgacgaagtcgatgagctcctggagctcatgaggaggacatggccaacgctgggcatcaccaagatgctgcacaacgtgtgctttgcatgggtcctcttccagcagtacgtggtcaccgggcagatcgagccggacctcgccggcgcggcgctcgccatgctcacggaggtggcggccgacgccaagcaggagagccgcgaccccgtgtacgcacgggtgctctcgagcatccttgccacgatacacgactggtcggagaagaggatgcttggctaccacgagtggttcggcaacggcaactgcggcgccggcggcgccatggccatggagggcgctctgtcactggcgctcgccaccacccagatcatctccgacaacgcgatcttcacgagcatcagcaccgcggaaaccgaacacgaagactgcagcgtcggaagcttcgccggcgaccgtgtggattactacgtgaggtgttccacgagaagcgccttcacgaaggttagcttcctacgcgtttggccacgccatggcgagcgtcttgtgttgatctgccgcggaaacgtgtgccagatactggagaacggactcgggcaaggggacagcctgatcatcgatcgccacgacgacgaagacccgggcgacatcctggcgcggctcgccggcgacacggagcacatcgcgctatccgagcgcgacgccttcgggccggtgctgaggcggtggcacccgttcccgggcgccatcgccgcggtgacgctgcacggctgcttcggcgtcgtgctgaagcagtacctgggcaaggccaccgtgctgagcaacgagctcgtgcacgtgctgcacgcggcggggaggctggagaaggcgctggtgcagatggtggtggaggacgtggcggacagcgacgacggcggcaagtcggtggtgagggaggtggtgccgtacgacgtggagtccatcgtgttcgggttcctcaggacgtgggtcgaggagaggctcaagatttgcagggagtgcatgctccgagccaaagaaaccgagagctggatgccgagatccaagaacgagccttacgcgcagtcggcggtggagctgatgaagctggctaaggcgaccgtcgacgagttctttggcataccggtggccgtgagggatgacttggtccaggacctcgccgacggcatggaggcgatctttttggagtacatctccttcctcacgtcttgcggtagcaagcagagctacctcccgtcgctgccgccgctgacgaggtgcaaccaggactcgaagatcatcaggctgtggaagaaggcggcgacgccgtgccgggcgcccgtgtcgagcccgcgcgcccacgggcaccaccaaggccagggcggcatggcgtccggcggccagaacccgcggccgtcgaccagccgcggcacgcagcgcctctacgtccgcctcaacacgctccacttcatcctcagccacgtccacgcgctcgacaagtcgctctccttcttctcccgcggcaggtgctcgtcgtcgccgtcgtccgccgccaccgcccgcctcctcgcgccgtgctcccacttcgaccgcgcgcgcgccgcggcgcagtccgcggtcgggcacgtcgccgaggtcgccgcgtaccgcctcatcttcctcgactcgcaccactcgttctacgacgggctctacgtgggcggcgtcgccgacgcccgcatccgcccggcgctccgcacgctgaagcagaacctgtcgctgctcctctccgtcctcgtcgaccgcgcgcagccggtggcggtgcgggaggtgatgaaggcctcgttccaggcgttcttgctcgtcctcgtcgccggcggcggcgacaggagcttcacgaaggaggaccacggcatggtggaggaggacttccggagcctgaagcgcgccttctgcacgcgcggcgagggagtggtgaccgaggaggtggtcgacggcgaggcggaggcggcagagagcgtcgtggcgctcatggggcaaacggcggagcagctcgtggaggagctgagcatcgcgtgcgagttgaacggcacggcgagctccgccggccagaggatgccgttgccggagacgacatggcggtggagccgcacggacccggacacgatcctccgcgtgctctgccaccgtgacgacgaggtggcgagccactacttgaagcgcgcgtttcagcttcccaagaggcggtga</cdnaseq>

Protein Sequence

<aaseq>MGRLQHHHRSRSASSSSFARSSDTAATDADARSLAADATVDCPF GHVNGLTRSDLREAAYEVFFMSCRAAGGGRLNYFPAGESGGGDVSPTIGAGPRGGTGM SVVNSRVKRALGLKARRSSQPTTARVSSMNASSAPGSPGRAMWAMSQPSTPVSPGKGR RPMTSAEIMRQQMRVTEQNDARLRKTLMRTLIGQVGRKAETIVLPLELLRQVKLTDFA DSGEHHQWQRRQLKLLEAGLIAHPSLPHDRLNAVVLRFREVMQAADTRAIDTGKTSDA MQALCNAVHALAWRSAPGSKAAGGDACHWADGYPLNVLLYVSLLQAIFDLKEETVVLD EVDELLELMRRTWPTLGITKMLHNVCFAWVLFQQYVVTGQIEPDLAGAALAMLTEVAA DAKQESRDPVYARVLSSILATIHDWSEKRMLGYHEWFGNGNCGAGGAMAMEGALSLAL ATTQIISDNAIFTSISTAETEHEDCSVGSFAGDRVDYYVRCSTRSAFTKVSFLRVWPR HGERLVLICRGNVCQILENGLGQGDSLIIDRHDDEDPGDILARLAGDTEHIALSERDA FGPVLRRWHPFPGAIAAVTLHGCFGVVLKQYLGKATVLSNELVHVLHAAGRLEKALVQ MVVEDVADSDDGGKSVVREVVPYDVESIVFGFLRTWVEERLKICRECMLRAKETESWM PRSKNEPYAQSAVELMKLAKATVDEFFGIPVAVRDDLVQDLADGMEAIFLEYISFLTS CGSKQSYLPSLPPLTRCNQDSKIIRLWKKAATPCRAPVSSPRAHGHHQGQGGMASGGQ NPRPSTSRGTQRLYVRLNTLHFILSHVHALDKSLSFFSRGRCSSSPSSAATARLLAPC SHFDRARAAAQSAVGHVAEVAAYRLIFLDSHHSFYDGLYVGGVADARIRPALRTLKQN LSLLLSVLVDRAQPVAVREVMKASFQAFLLVLVAGGGDRSFTKEDHGMVEEDFRSLKR AFCTRGEGVVTEEVVDGEAEAAESVVALMGQTAEQLVEELSIACELNGTASSAGQRMP LPETTWRWSRTDPDTILRVLCHRDDEVASHYLKRAFQLPKRR</aaseq>

Gene Sequence

<dnaseqindica>2480..3474#2209..2395#677..2131#1..582#atggggcgcctccagcaccaccaccgctcccgctccgcctcctcctcctccttcgcgcgctcctccgacaccgccgccaccgacgccgacgcccgcagcctcgccgcggacgccaccgtcgactgccccttcggccacgtcaatggcctcacccgctccgacctccgggaggccgcctacgaggtcttcttcatgtcctgccgcgccgccggtggcggccggctcaactacttcccggccggggagagcggcggcggcgacgtgtcgccgaccatcggcgccggcccccggggtggcacggggatgagcgtcgtcaacagcagggtcaagagggcgctggggctcaaggcgcggaggtcgtcgcagccgaccacggcgcgggtgagctccatgaacgcgtcgtcggcgcccggctcccccggccgcgccatgtgggcgatgagccagccgtcgacgcccgtgtcgcccgggaaagggaggcggccgatgacctccgccgagatcatgcggcagcagatgcgtgtcacggagcagaacgacgcccgcctccgcaagacgctcatgcgcaccctcatcggccaggtccgtgcccgcattgcattgcattgcgtcgtgacgcgtcgccgccattgatacgcactccacgttgttcgatttggtgatccactttgtgcaggtgggaagaaaagccgagacgatcgtcttgcccctggaactgctccggcaggtcaagctcaccgacttcgccgacagcggcgagcaccaccagtggcagcgccggcagctgaagctcctcgaggccgggctcatcgcgcacccgtccctgccgcatgaccgcctcaacgcggtggtgctcaggttccgcgaggtcatgcaggcggcggacacccgcgccatcgacaccggcaagacgtcggacgccatgcaagccctctgcaacgccgtgcacgcccttgcctggcgctccgcccccggaagcaaggccgccggcggcgacgcctgccactgggccgacggctaccctctcaacgtgctcctctacgtgtcgctcctccaggccatctttgacctcaaggaggagaccgtcgtgctcgacgaagtcgatgagctcctggagctcatgaggaggacatggccaacgctgggcatcaccaagatgctgcacaacgtgtgctttgcatgggtcctcttccagcagtacgtggtcaccgggcagatcgagccggacctcgccggcgcggcgctcgccatgctcacggaggtggcggccgacgccaagcaggagagccgcgaccccgtgtacgcacgggtgctctcgagcatccttgccacgatacacgactggtcggagaagaggatgcttggctaccacgagtggttcggcaacggcaactgcggcgccggcggcgccatggccatggagggcgctctgtcactggcgctcgccaccacccagatcatctccgacaacgcgatcttcacgagcatcagcaccgcggaaaccgaacacgaagactgcagcgtcggaagcttcgccggcgaccgtgtggattactacgtgaggtgttccacgagaagcgccttcacgaaggttagcttcctacgcgtttggccacgccatggcgagcgtcttgtgttgatctgccgcggaaacgtgtgccagatactggagaacggactcgggcaaggggacagcctgatcatcgatcgccacgacgacgaagacccgggcgacatcctggcgcggctcgccggcgacacggagcacatcgcgctatccgagcgcgacgccttcgggccggtgctgaggcggtggcacccgttcccgggcgccatcgccgcggtgacgctgcacggctgcttcggcgtcgtgctgaagcagtacctgggcaaggccaccgtgctgagcaacgagctcgtgcacgtgctgcacgcggcggggaggctggagaaggcgctggtgcagatggtggtggaggacgtggcggacagcgacgacggcggcaagtcggtggtgagggaggtggtgccgtacgacgtggagtccatcgtgttcgggttcctcaggacgtgggtcgaggagaggctcaagatttgcagggagtgcatgctccgagccaaagaaaccgaggttttttgttgcgtgtttcttttcgtcgaacacgtgttctgcacggtgcagtctcaagaattgcatattttgtgtagagctggatgccgagatccaagaacgagccttacgcgcagtcggcggtggagctgatgaagctggctaaggcgaccgtcgacgagttctttggcataccggtggccgtgagggatgacttggtccaggacctcgccgacggcatggaggcgatctttttggagtacatctccttcctcacgtcttgcggttcgtagtcgatgttacaaattacaacaacattcctcgcacgaatccgaaatttatcttgattttggtgcgtcgatcgagcaggtagcaagcagagctacctcccgtcgctgccgccgctgacgaggtgcaaccaggactcgaagatcatcaggctgtggaagaaggcggcgacgccgtgccgggcgcccgtgtcgagcccgcgcgcccacgggcaccaccaaggccagggcggcatggcgtccggcggccagaacccgcggccgtcgaccagccgcggcacgcagcgcctctacgtccgcctcaacacgctccacttcatcctcagccacgtccacgcgctcgacaagtcgctctccttcttctcccgcggcaggtgctcgtcgtcgccgtcgtccgccgccaccgcccgcctcctcgcgccgtgctcccacttcgaccgcgcgcgcgccgcggcgcagtccgcggtcgggcacgtcgccgaggtcgccgcgtaccgcctcatcttcctcgactcgcaccactcgttctacgacgggctctacgtgggcggcgtcgccgacgcccgcatccgcccggcgctccgcacgctgaagcagaacctgtcgctgctcctctccgtcctcgtcgaccgcgcgcagccggtggcggtgcgggaggtgatgaaggcctcgttccaggcgttcttgctcgtcctcgtcgccggcggcggcgacaggagcttcacgaaggaggaccacggcatggtggaggaggacttccggagcctgaagcgcgccttctgcacgcgcggcgagggagtggtgaccgaggaggtggtcgacggcgaggcggaggcggcagagagcgtcgtggcgctcatggggcaaacggcggagcagctcgtggaggagctgagcatcgcgtgcgagttgaacggcacggcgagctccgccggccagaggatgccgttgccggagacgacatggcggtggagccgcacggacccggacacgatcctccgcgtgctctgccaccgtgacgacgaggtggcgagccactacttgaagcgcgcgtttcagcttcccaagaggcggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0138600, RefSeq:Os03g0138600