Os03g0139100

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0139100| Description = 60S ribosomal protein L17 [Oryza sativa (japonica cultivar-group)]| Version = NM_001055447.2 GI:297600293 GeneID:4331...")
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Gene Name

Os03g0139100

Description

60S ribosomal protein L17 [Oryza sativa (japonica cultivar-group)]

Version

NM_001055447.2 GI:297600293 GeneID:4331562

Length

2802 bp

Definition

Oryza sativa Japonica Group Os03g0139100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2121061..2123862

Sequence Coding Region

2121087..2121099,2121227..2121511,2123362..2123403,2123492..2123574

Expression

GEO Profiles:Os03g0139100

Genome Context

<gbrowseImage1> name=NC_008396:2121061..2123862 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2121061..2123862 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagcgagggaggggagggtcggcggggaacaagttccggatgtcgctgggtctgcctgtggcggcgacggtgaactgcgcggacaacaccggggccaagaacctctacatcatctccgtgaagggcatcaagggccgcctcaaccgcctcccgtccgcctgcgtcggcgacatggtcatggccaccgtcaagaagggcaagcccgatctccgtaagaaggtcatgcccgccgtcatcgtccgccagcgcaagccgtggcgccgcaaggacggtgtctacatgtacttcgaagataatgctggagtgattgtgaatcctaagggtgagatgaaaggttctgctatcactggacccatcgggaaggagtgtgctgacctttggcctaggatagctagtgcagcaaatgctattgtctga</cdnaseq>

Protein Sequence

<aaseq>MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKG IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA GVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV</aaseq>

Gene Sequence

<dnaseqindica>27..39#167..451#2302..2343#2432..2514#aatcggatcccaccccagccgccaccatgtcgaagcgaggtaaaccattcttcctcttcgttcccactcgatccgtggaatatttttccattcgattcaaccactgtgcttgcaaatcttgcgctctaatctgtttgtttcgtgttgcgatctgatggtgatgcagggaggggagggtcggcggggaacaagttccggatgtcgctgggtctgcctgtggcggcgacggtgaactgcgcggacaacaccggggccaagaacctctacatcatctccgtgaagggcatcaagggccgcctcaaccgcctcccgtccgcctgcgtcggcgacatggtcatggccaccgtcaagaagggcaagcccgatctccgtaagaaggtcatgcccgccgtcatcgtccgccagcgcaagccgtggcgccgcaaggacggtgtctacatgtacttcgaaggtattattcacagatgacctcttacacctcttacacctgttgttttgttgttgtaattatcatgtgatgcgaaatttgaaccctatattatacttgtgtgctttgctactgtgtctacatgtacttcgaaggtattattcacagatcacctcttacacctgttgttttcttcttgcaataatcgtgtgctgcgaaatttgaaccctatattatacctgtgtcctttgctactgttagtttagatgtttggttagagtgtggatgacgggagggccgccgggctctccagcttaaactggagcagatattacagtatctgtatattccaaagtaaacgtcagagattaagccctcgggtgttgaggtttttgcatgaaagatttttcctttatccatgtcctccatctgtgggctgcctcatattccattgccttgtgtagcggcgttgctgccttgaaaatttgggattggccatgaggcgaatattcccccaacctaaaattcaaatatgccctatttttcttgtgctgtatttaattctctgtaatattcatggtaatttttatcttacgttatatcagtgaatatcattctagatgagatcattttaaaatagacatttctttgcaacgtatttattatatatatttgtatactgaactttacattctgtattatatcccatatcccaggttatctgtgatttagcattgctgcatagaaatattgtgtctaggccatgagtcatcatttttattgcacacagttacaccatttctcattttttttattttgtactttttatttctacaaatgtattttgttatttccatatccaatcctagagttgtactttgtatgacaaatttataattgttcagcactctgtttttgttgtgattaacttgtacactttactgcttgacggggggacatccgagtccttcagcctttaaggagcaaacctcacatgtttgcatattcctaggcaaacgtcataaagtaagcctttgggtgttgaggttttccttgtgacttcctccatctgatggcagactcatattccatggcccttgttagcggcgttgctgcaattaaacattgggtctaggccatgaggcaatcattttaaatgcttcctaacaatcatattttgttctctgttagatatcttacattttatttggaacttcttttgttatcccatgcaacatttcttctattgacggggggacatccgagtccttcagcatttttttggagcaaaccttacatgtttgcatagtcctaatctaacgtcataaagtaagcctgtggatgttgaggttttttcagaattcctccatctgttggcagactcatattccatggcccttgttagtggcgttgttgcaattaaacattgggtctaggccatgaggcagtcattttaacagctcaccttcaattttctcatttgtatttgtaatgcctaaagttgttgctatttgatggagggacatctgagtccctcaacctttttggagcaaacctcatgtttgcatagtcccaggtagacgtcataaagtaaacatttggatgttgaggttttccctaggaattgctccatctgaatgtagactcatattccatggcccttgttagtggcgttgccgcaattaaacattcggtctaggccatgaggcagtcatttttactcagttcattcaatttggaaaatcaattattccatattttcatataagttgttcttggactggtagttattattagtttgcttggtttattttgctactcctatgataaactccaaaaccatttagctgattgttgttgtgattcatttgcagataatgctggagtgattgtgaatcctaagggtgagatgaaaggtaacaatgcagaacttgactttcttgatgctgaataatctaaattggacatgttaactgattatatatggtctatatgttctatcaggttctgctatcactggacccatcgggaaggagtgtgctgacctttggcctaggatagctagtgcagcaaatgctattgtctgagcttgtttgaatgaattgtaagacagctatatgacctcaggatcgtctgcaaatggtttactaggacaactgtggaactttgtgatgctatcgtttgtttgcccgttgcagttttgtagtgaacagaagttgccatccatatgatattttatttgccatctatctttctgctgttctcgtgtatgattgaaatgtgtggtgttgtcaaatgatgcctgcagttgattttacgttttgctgtaattatctagaaaaaacgttatttagtttgcttgggttgtctatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0139100, RefSeq:Os03g0139100