Os03g0139200

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0139200| Description = Cytochrome c region domain containing protein| Version = NM_001055448.1 GI:115450624 GeneID:4331563| Length = 4755 b...")
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Gene Name

Os03g0139200

Description

Cytochrome c region domain containing protein

Version

NM_001055448.1 GI:115450624 GeneID:4331563

Length

4755 bp

Definition

Oryza sativa Japonica Group Os03g0139200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2124101..2128855

Sequence Coding Region

2124423..2124575,2124683..2126278

Expression

GEO Profiles:Os03g0139200

Genome Context

<gbrowseImage1> name=NC_008396:2124101..2128855 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2124101..2128855 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaacttgtctacttggaaaggagaaatggattcgatgaagatagcacctctccagagttcagtggaaggtcagcaattgaccatcaacagctgtccattgctacacctgaggttgagtctgatttgggacagacaatctacaagcagccattgccatcagatgagaagaaaagcaggagctgccagtcatgtcacaagtcaccatgttcttgcaggagcgaagtattccattcagatttgtacccgacacttcctgcgaagatgatgatactggaattcctcatcagaagcctgaggcacccaagaagaacccacaatgtgagtgatcttgatgacatgatcagcaatggagctagcacagggagtgtagttcttggtccttcggagaaaatgatgttggattctttgcattcacttgttgatgcgaaaacgaggccaaaaagtccttcattcttccactcaggaaccaagatgagaaaagctcggtcaaaatcccacatcataacacagtcagagatactgaagctgatatctcctgagacatgggagatctcctcccctggcgtgtcgccgttgaagaagagcacagctgagttgagcatgcatgagaagatggtgtcctcagatacaccatccatgagttcaaatcaacctgttctgtcctcatgtccatcttctttaagtgcagggcttctacaatgcatatggaaggatgggcttccacactttgaactgtcactggacaatcctatggcagtatacactgccaatcctacaaaggcccatgacaatgacaagccccttgactatgtctatttgttccattcaggagagcaagggagaaaagattggttaggcaactcaagcagtgtatcacggcttgtcggcaagatgaaggtgtcaagttctttggttctgaacccagacaagtctacttctatggagacagagtttgtcctgtatggttctccggatgactacctgaggcaaatgcaaagttcatatggtgttacaaaaggcaaggggctagccaagagagtggcagacattatgaagccatccaatttgaactctagtccgaaacatgtgtggaagtttggcaaatcgtcctcccaacagattgatgagatgactgaaatacctgaaggtgaacagtgcagtgccaaagaatcagtcctcaagaacctcgtcgctgatgatttgcctaccaaccaggagatagcagcaattgtagtacgaaaacagcggcgcgaacgtcggaaatcacctgttcttggtggatgggggctcaagttccttgagaaagctggagctactcatccagggagcactgaagatggtgatgttcagaacaagaaaaataatgcagggagtgtaagtgccatatttccccgaggctaccatggcggcgcggcttccaagaacggcagccctgccagcctcatcggaagatggaggtccggtgggcgctgtgattgtggcggatgggatattggttgcccaatcagagtactgcagaatgatggctgtggtacttcgcctcaggcagagtcccagtcacaggacaggaaatcagtagagctctcagtcaagggtgcgaagaagggaccaatgttcaggcttgtgaacatcacagatgacctgcacatcatatacttcgactccagtctttcgcctttgcaatgcttctcggcaggaatagcgattatccacagccaggcgcctcacctctatccaaaactctga</cdnaseq>

Protein Sequence

<aaseq>MELVYLERRNGFDEDSTSPEFSGRSAIDHQQLSIATPEVESDLG QTIYKQPLPSDEKKSRSCQSCHKSPCSCRSEVFHSDLYPTLPAKMMILEFLIRSLRHP RRTHNVSDLDDMISNGASTGSVVLGPSEKMMLDSLHSLVDAKTRPKSPSFFHSGTKMR KARSKSHIITQSEILKLISPETWEISSPGVSPLKKSTAELSMHEKMVSSDTPSMSSNQ PVLSSCPSSLSAGLLQCIWKDGLPHFELSLDNPMAVYTANPTKAHDNDKPLDYVYLFH SGEQGRKDWLGNSSSVSRLVGKMKVSSSLVLNPDKSTSMETEFVLYGSPDDYLRQMQS SYGVTKGKGLAKRVADIMKPSNLNSSPKHVWKFGKSSSQQIDEMTEIPEGEQCSAKES VLKNLVADDLPTNQEIAAIVVRKQRRERRKSPVLGGWGLKFLEKAGATHPGSTEDGDV QNKKNNAGSVSAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQN DGCGTSPQAESQSQDRKSVELSVKGAKKGPMFRLVNITDDLHIIYFDSSLSPLQCFSA GIAIIHSQAPHLYPKL</aaseq>

Gene Sequence

<dnaseqindica>4281..4433#2578..4173#agtctagttgcagctagttgtgcgctagtctagtcgtcctcttcacatggcggcctgcgcgtaggaaccgagccttttcttcttcttcttcttcttcttctccactacaatcccgggtaatcttgccattcccctgtctcgtctctgccttttctgcgccaaaagttgtagtaggcttgtgggagtagtagtagcttccctgaattctgcacctgttccttgttcctcgcgctctgctgctcttcttctcgcaattactccttgccgttcttgatgagccattaatggtggaggggagttataagctgcccagttatggaagttttgctgatctgatgcggtggtggtaggcgtttcgatcctttcgcgagccggttgttccttggcttgcaggcaggcagggatggaaactgtagcctacgcctcacgcgttgccgagagagaggcagctcatttgccgtcgaattgatggaaaagagagcgtgagtagtaaagaggacagctttttccttaacgcctctccgtgtgctcctctccgttctggaaatcgatcaagcggccagccatctccatctccatcgtcttcttcttcttccttctcctggagccctttgggttttggtggtgtctgatcgtctgatactctgattgctagttttgggggattgttactagtgcagaaaagctgactgttttgtctcttcttatccattctagtaagtggtactcttgtgccatcggcttgattcttccttggtccctttgatatcttggtttaggtcctaagtcctcttcacctaatcttgtttttcttttgttccttcggttggtgagtcataggctatctcagtgttgcctccggttcttatataaccttccagtcctcttgctctttaacctgttcttgtacacttcacattagtccattttccttctgtttcccaaggtttttgttgcaagtgcacactcttctcatcaacaagaggtgttctgctctgtgttgggaggtcaggagacagtgcttagcttgcaggccggcgttggatgctgcgtggtgagctctgaggtgaggaatctgatgccctctccacttctactcaatgatgaatcatctttagttcacttttgttcttttcagccttcgagtgaccatgcaaacgaaacgagcataggttcacttggttttaattgacagctttgggtttatgttgtaaagtttgttttgtgcttgcctcttgcttgagtctttgagaaaagatggtttcaactttcttgtttcctttgtacgtgttcttgtgcctaggcttccattttggccgtgttaaaaggtgcaacaaagcgttgtgctggtgaatgcgttctttaagccgttgatgaatgcatttaaggtcatcttttttggttgggctaggagtgtagtagtgctttttgcagcgtgggcgccgctgcaacttttggttttatttctaaccaacttctcttttctccggttgacttgatacacaatagttgatgcagcaagaacttcttggttattttttttcctttgatctttttggcactcacaccctttcttctcttggtctgaattaagtgagagagactgagagttgagaatatcccagaggtcagttttctggtttctcaagcataattcaacacttgtaaattcatttggttcggtattgccttttttcctatgtacatctcgtgcagtcttgatcaggtttcccgtgcctgtacggcttgtgtttttcaagtactgatactaattttgctagaatccaacatctaatgcttcagtaggctacttgctttcagtttcagcagtgcattttaagcaatgaagtacacttagtactagcttgctctcttttgtttctactggaaggaaagcattcagagttctgatactacaaaagtactatatttatgggtgcctgggtggagtgtacgagatgatcttacggagaaagtattaattgtgtgctgttattagcttattgctgatgagatggtacaatattatcgctggcaacaatcattggttgtttccattaggaataagagagattcctttcatggttagatcctactgataccaagcattttgtgtgtataaacatttctgcaccagctgcagtgtgcatgtttcttccacgactttgttttgagcaagaggggatgttccataagaaagaagtaacatggcattctctcttcatagttgtcaataatttcagttgttttgtagtttattggccagccacaaaatcgtatgcacgtttcttccatgatcgatgggcaaaattttgttacgtggtacaaatgctgattccatttcgttttggcattttattgcaatttacccaaagtccttgactccatgcctatttttcaattactttctaatctggcattggtgttcagaaattgctatatctgaacctagattttcagtttcggtggtcttttttttgttcagtcaactgagcaagcttgcaactcttttgttgtgcaggtgatcaaggtctcgtttcacgacgagtagtagagttcccattaccagagctaaagatggaacttgtctacttggaaaggagaaatggattcgatgaagatagcacctctccagagttcagtggaaggtcagcaattgaccatcaacagctgtccattgctacacctgaggttgagtctgatttgggacagacaatctacaagcagccattgccatcagatgagaagaaaagcaggagctgccagtcatgtcacaagtcaccatgttcttgcaggagcgaagtattccattcagatttgtacccgacacttcctgcgaagatgatgatactggaattcctcatcagaagcctgaggcacccaagaagaacccacaatgtgagtgatcttgatgacatgatcagcaatggagctagcacagggagtgtagttcttggtccttcggagaaaatgatgttggattctttgcattcacttgttgatgcgaaaacgaggccaaaaagtccttcattcttccactcaggaaccaagatgagaaaagctcggtcaaaatcccacatcataacacagtcagagatactgaagctgatatctcctgagacatgggagatctcctcccctggcgtgtcgccgttgaagaagagcacagctgagttgagcatgcatgagaagatggtgtcctcagatacaccatccatgagttcaaatcaacctgttctgtcctcatgtccatcttctttaagtgcagggcttctacaatgcatatggaaggatgggcttccacactttgaactgtcactggacaatcctatggcagtatacactgccaatcctacaaaggcccatgacaatgacaagccccttgactatgtctatttgttccattcaggagagcaagggagaaaagattggttaggcaactcaagcagtgtatcacggcttgtcggcaagatgaaggtgtcaagttctttggttctgaacccagacaagtctacttctatggagacagagtttgtcctgtatggttctccggatgactacctgaggcaaatgcaaagttcatatggtgttacaaaaggcaaggggctagccaagagagtggcagacattatgaagccatccaatttgaactctagtccgaaacatgtgtggaagtttggcaaatcgtcctcccaacagattgatgagatgactgaaatacctgaaggtgaacagtgcagtgccaaagaatcagtcctcaagaacctcgtcgctgatgatttgcctaccaaccaggagatagcagcaattgtagtacgaaaacagcggcgcgaacgtcggaaatcacctgttcttggtggatgggggctcaagttccttgagaaagctggagctactcatccagggagcactgaagatggtgatgttcagaacaagaaaaataatgcagggagtgtaagtgccatatttccccgaggctaccatggcggcgcggcttccaagaacggcagccctgccagcctcatcggaagatggaggtccggtgggcgctgtgattgtggcggatgggatattggttgcccaatcagagtactgcagaatgatggctgtggtacttcgcctcaggcagagtcccagtcacaggacaggaaatcagtagagctctcagtcaaggtaacactaggctcttcagtagattttttgtgatttcttgaagattttagaatctagtgttgatgcaatagaatagctttctgatccttcttcctactgtttgtcagggtgcgaagaagggaccaatgttcaggcttgtgaacatcacagatgacctgcacatcatatacttcgactccagtctttcgcctttgcaatgcttctcggcaggaatagcgattatccacagccaggcgcctcacctctatccaaaactctgaagacacattgttggtcttgtctaatatatagaagatttgaaacatgtcttgatcttgcatatttcctttcgctttggtttcataaagaaaaggtgcaggttatcctcatgttaaattgttaatatccattgttaatcttgtttaacgctataatgttttataagctggaaggagtaggatattaggatatatcttactaatgtaaattttgtttcaatgaattggagggggaaagacaggttccctcctgttaaaactgattcggccaaaacgagagaagcgcataaataaatctttacacagctccgttttgctaaatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0139200, RefSeq:Os03g0139200