Os03g0140900

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0140900| Description = Conserved hypothetical protein| Version = NM_001055458.2 GI:297600298 GeneID:4331574| Length = 3199 bp| Definition ...")
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Gene Name

Os03g0140900

Description

Conserved hypothetical protein

Version

NM_001055458.2 GI:297600298 GeneID:4331574

Length

3199 bp

Definition

Oryza sativa Japonica Group Os03g0140900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2239133..2242331

Sequence Coding Region

2239133..2239480,2240707..2240790,2241189..2242331

Expression

GEO Profiles:Os03g0140900

Genome Context

<gbrowseImage1> name=NC_008396:2239133..2242331 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2239133..2242331 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtgcggccggggctgttgttgagatcagttcggacgacgaggcgattcctgttgctgccaagcgtcccaacgttcctcccgtgtcgtcttcacatcctctacctgaagactgcaacggagttgaggagggtttaggtgatcctgctgccttggtggaattcgtggcatctatgctggatgacaaaaggtctgcgcgtgatgtggctgctgctgatgatggggacgacgacgattgcgtgatgctagatggtgaccctgataaagcggtcctcgttgtcaatgagcagagacctgggcaaggtggcccagaggaagaactgcagatagtttcagagaaaggagagatagcatgcagggatttccctcatccacgccatctatgtgttagcatgccattcacaagttctcatgcagatcattgtgccatgtgccactgttatgtttgcgactctcctgctccctgtgccttttggggcaaaggtacagagcctactgatcattgtcatgctacggacaagaatgcaaaatggacgaaaatgaggcagtcattgaagcgcaaaaacctgccatcatctaaccgtagaggtatcaagaatcattttcagccaatctcagcaacagcatccttgcagttgcagcaatatacaggggatcgtttttcagttccacgtctatcaccattgtctccagtaggattccatgtttcgagaaatgtgagccaaaatcaatggatgatgaagctcattggagttccaccgaatgtgggacaacctgttaatctgcaggaagcaacatttcctagagctagcattccgcgcaaaagattcagaagtgatggttcagctcctccagttcatctatccacaaatgctaaccatttgcgccatcctgcccctaactctgtcctggttcagccagtatcctctgcagcatttcagacaacacaatctcaaccagcatcctctgcagtatctcagaattctgtcagtgctgctagaccattacgagttcagacaacacaatctcagccaccatcctctgcagtatctcagaattctgtcactgctgctagaccattacggggttactcacctcagaattctttcagtgcaccagttagggttcagtcgacatcatatcatcaggttgctccaggtatatctcaaggacttcaggttcagtcaacatcataccttcaggttgatccaggcagggcggttagtgctgaactgcagctttctcagtgttcctcgcttcaaactcagggaattcaacaccagcatgatccatcggcagatatttaccaaaacatatggaaggaggcacttgctaagctggcatcagagctgggggtttctgattacaatattgatccaccagggcgtcttccaagcactcctcaacccaatcagctgcatgctcaaatgaggcctggtcatcaacctactcaagcaacggcaaggcagggagttcaagctaatggtggtcatgttgcagcagcatcacagaaaaggacttccaatggccaccacttgccaaatcacaaacaattcaaccctggtgccaattga</cdnaseq>

Protein Sequence

<aaseq>MGAAGAVVEISSDDEAIPVAAKRPNVPPVSSSHPLPEDCNGVEE GLGDPAALVEFVASMLDDKRSARDVAAADDGDDDDCVMLDGDPDKAVLVVNEQRPGQG GPEEELQIVSEKGEIACRDFPHPRHLCVSMPFTSSHADHCAMCHCYVCDSPAPCAFWG KGTEPTDHCHATDKNAKWTKMRQSLKRKNLPSSNRRGIKNHFQPISATASLQLQQYTG DRFSVPRLSPLSPVGFHVSRNVSQNQWMMKLIGVPPNVGQPVNLQEATFPRASIPRKR FRSDGSAPPVHLSTNANHLRHPAPNSVLVQPVSSAAFQTTQSQPASSAVSQNSVSAAR PLRVQTTQSQPPSSAVSQNSVTAARPLRGYSPQNSFSAPVRVQSTSYHQVAPGISQGL QVQSTSYLQVDPGRAVSAELQLSQCSSLQTQGIQHQHDPSADIYQNIWKEALAKLASE LGVSDYNIDPPGRLPSTPQPNQLHAQMRPGHQPTQATARQGVQANGGHVAAASQKRTS NGHHLPNHKQFNPGAN</aaseq>

Gene Sequence

<dnaseqindica>1..348#1575..1658#2057..3199#atgggtgcggccggggctgttgttgagatcagttcggacgacgaggcgattcctgttgctgccaagcgtcccaacgttcctcccgtgtcgtcttcacatcctctacctgaagactgcaacggagttgaggagggtttaggtgatcctgctgccttggtggaattcgtggcatctatgctggatgacaaaaggtctgcgcgtgatgtggctgctgctgatgatggggacgacgacgattgcgtgatgctagatggtgaccctgataaagcggtcctcgttgtcaatgagcagagacctgggcaaggtggcccagaggaagaactgcagatagtttcagagaaaggagaggtaccagtactttcttgcttatttccatttaatttttctagttgcacttcagaccgtacattgtcttcgtggtggtaagtcaattcaaggcctgtttagatccatttggaatggcaaatggcaaatgttttggcattgcaaaagtactagttggtgtttagatgcatgttaaagttttgccattctagcactaaagtgagagagagaaagagagagggagtggtcccaaagcactttttggcacaatttgctactatggactagcaaatgccaaatgccaaattgccaacttttgctactagtgtttagatccaaaatggcaaaaagtgctataaaatggcaaaacttttgccattttggaggatctaaacaaggcctcaaattgaaattttcaactagtatatgcataaccatcgttgtcttatggggtgtttgggagagaggggctaaacccctttgtcgactagctattgacatggcgggtcctaatctctattaacatcttggactcgtcgaatgtagctaatctatgcacaactgtggttcatttatgtaggagtttatttaaggttaagtcaaactttatttgttagcacaaattaatttcaatgttttagatcttggttttgttaaaacctcttcttttataaacatcaaatctgcatgatcgtatatcctgttgttaatcacttgtgcaacactcttattgatttatctggtccgttttattgaatttgtatgcataccaaactcatactgaagatggagcttttgtggaaggtagtactatagttgagtgatcgttttgccttgctgatgtatatcattggtggccttgtctgagtttccatgcacttattatattgtaactaagatggctgcaagtggtgtccatattactatatagtggtctctaactggacaatattgtactttcatgtcagatctttttgtcctgggtattggtcttcgaaacatattatattgttcttgtagaagctaactgatgaattatcaataacatgaaaacctaacttagaactgattaatcgttcctaacccaaggagttgctgatgctgcagtcattgctatggcaatatatgctttcctttcatcatctctatcgaatgttatactttcttagcattcttgattcatctaaaagctcagatgttacaggagagtatatgtaacctgacaatttccccccttttccttttttcagatagcatgcagggatttccctcatccacgccatctatgtgttagcatgccattcacaagttctcatgcagatcattgtgccatggtcagtaatcaatccctaccctcttcatattatgaaatgatatttcttggttcatataaaagtatatagtcaatagtacttactccgtttgtattttaatgtatgacaccgatgactttttgaacaacctttaaccatttgtcttattcaaaatttttgtgcaaatataaaaatatttatgtcatgcttaaagaatatttaatgataaatcaagtcacaattaaacaaatgataatcacatagtaatttttttaaataagacaaatggtcaaacgtatctcaaaaagtcaacggggtcatacattaaaatacggagggaatagtacatattacttacagttccatcactgatgcattggcatgaccttgcttatttcttcttccaaatataaatgcagtgccactgttatgtttgcgactctcctgctccctgtgccttttggggcaaaggtacagagcctactgatcattgtcatgctacggacaagaatgcaaaatggacgaaaatgaggcagtcattgaagcgcaaaaacctgccatcatctaaccgtagaggtatcaagaatcattttcagccaatctcagcaacagcatccttgcagttgcagcaatatacaggggatcgtttttcagttccacgtctatcaccattgtctccagtaggattccatgtttcgagaaatgtgagccaaaatcaatggatgatgaagctcattggagttccaccgaatgtgggacaacctgttaatctgcaggaagcaacatttcctagagctagcattccgcgcaaaagattcagaagtgatggttcagctcctccagttcatctatccacaaatgctaaccatttgcgccatcctgcccctaactctgtcctggttcagccagtatcctctgcagcatttcagacaacacaatctcaaccagcatcctctgcagtatctcagaattctgtcagtgctgctagaccattacgagttcagacaacacaatctcagccaccatcctctgcagtatctcagaattctgtcactgctgctagaccattacggggttactcacctcagaattctttcagtgcaccagttagggttcagtcgacatcatatcatcaggttgctccaggtatatctcaaggacttcaggttcagtcaacatcataccttcaggttgatccaggcagggcggttagtgctgaactgcagctttctcagtgttcctcgcttcaaactcagggaattcaacaccagcatgatccatcggcagatatttaccaaaacatatggaaggaggcacttgctaagctggcatcagagctgggggtttctgattacaatattgatccaccagggcgtcttccaagcactcctcaacccaatcagctgcatgctcaaatgaggcctggtcatcaacctactcaagcaacggcaaggcagggagttcaagctaatggtggtcatgttgcagcagcatcacagaaaaggacttccaatggccaccacttgccaaatcacaaacaattcaaccctggtgccaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0140900, RefSeq:Os03g0140900