Os03g0141800

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Revision as of 12:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0141800| Description = Protein of unknown function DUF594 family protein| Version = NM_001055463.2 GI:297600302 GeneID:4331579| Length = 42...")
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Gene Name

Os03g0141800

Description

Protein of unknown function DUF594 family protein

Version

NM_001055463.2 GI:297600302 GeneID:4331579

Length

4210 bp

Definition

Oryza sativa Japonica Group Os03g0141800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2280934..2285143

Sequence Coding Region

2280934..2282178,2284181..2285143

Expression

GEO Profiles:Os03g0141800

Genome Context

<gbrowseImage1> name=NC_008396:2280934..2285143 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2280934..2285143 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccaccgccactcaagtaccggcactgcagcaatgtggacgggctggtctcggtggaggcgctgcgaatcatcgtggagaccaaggcttgcttcgtggcggtggcgctggcgctggcctacttcctgacggcgtcgcggcaccggctgtggagctccagccacctcatcaaggggttcctcttcgccgtgacgcagccggtgacccggttcctcgtcagcatgttcgccatgctgctctccatgccgttccgcaacgacctctacctgctctggggcatcctcctcctcgccggctacgagggcgtctacaccatctccggctacggcgtctccgcccgcctctccgacctcgccgtccacgagttcacgcgctgcagcaacattgtggtgctcggcctctacgtccggtactactcccatgcctcgcagttccggtacccgctctgggcgctctgggcactcatggtcgccaagttcttggagcggatcgtcctgttcaagaacggcaaccgaaagtacggtgacgggaacaccagccgcgtcgcggactacatgaagcacgagcacgagttgagcaacacagacgctgaagctggcggcttctccatggaggactacaagtaccttatcgttggcgactccaagttggaaaccacgatcgtcgatggtatgacctacgagccaaagttgacgccgccgattagacaaactcaagaagcggacgatacggtggtcgtcgtcaccgtcgataaggtgtggacgtgcaagggggagctcctcaagactgataatcgcggcgacaagctgaaggacatctgcctgtccttcgcgctgtgcaagctgcttaggcggaagttcgccggcgttaatgcgtcggagaacgagcggagcaaggcgcagaagctcgttttcgacggcctcatcccggacccggagcggacgtttcgagttgtccgggcagagcttggctttgcgagagacatgagcttcaccaagtaccccatcttgttcagctacggctttccggtcgtcagcgtcgtgctgttcgcagcgacgctcggcgtgtcactgtggatcatctcgtcagcgatccaccactaccggattccccgcaagagcacgcccaacttggtcaacggcaagaacgtggatctgattatcacttttgttattgtgttcatggttacggcgatggacatatgcgagttcttcatgcacctcttctccgactggaccaaggttatggttgtttctgaatacgtccggaaacggtacgtgcgatgctgtctccttgaccgtattctgtggttggtatgccacggcaagttagctgagacgatcggaagctccctaggacagttcgaccttctcaacggggcgaagaaaggctacatccctgaacgcatcgtcaggttgtaccacatggtgagatcgtttatcctgctcaccgacgacaaagactaccgcatcaagaaaggcaagagcctccggccggttccggagtccgtggagaaggcgctatgcgagacgcttctgagcaacaggaaacagttgactcagggtctgcgtctgctcacaagaagcaagctacaggccgagagcgaggagctcttgacgtactgccaactagcggagatcgagaccatcgtcgtgtggcacgtcgcgacgtgcaaacttgagcagcaatcgccgcatgaacccgtcgagagctatcaggtggccaccgcgctgtccaagtactgcgcctacctggtgttctacaatccgaagctgctgccggttggcaacacctctgttaggcatacctgcaagacattggttaggcatgacagcagctgtgacaggagttgtggtggcgatgattgcatgataagaaaaggcgaggcgctcgcggcggcgctgctaaaagggcgggagctcaacaagtcgtctaaagagccggggatgtggacggagctggcggagttctggtcggagctgctgatatcgctcgcgccgtttgggagcgttggcgcccacgagaaggggctcggcgacggcggcgagttcatcacgcacctgtgggctctgctgtaccatgcagggatcgatgccaagtactcttggtccagtgccagtactgccagtggtgaatctggcggcagagctgacgtttacccgtttcagaatggcatggataccgtgtcacacgcggttaattaa</cdnaseq>

Protein Sequence

<aaseq>MAPPPLKYRHCSNVDGLVSVEALRIIVETKACFVAVALALAYFL TASRHRLWSSSHLIKGFLFAVTQPVTRFLVSMFAMLLSMPFRNDLYLLWGILLLAGYE GVYTISGYGVSARLSDLAVHEFTRCSNIVVLGLYVRYYSHASQFRYPLWALWALMVAK FLERIVLFKNGNRKYGDGNTSRVADYMKHEHELSNTDAEAGGFSMEDYKYLIVGDSKL ETTIVDGMTYEPKLTPPIRQTQEADDTVVVVTVDKVWTCKGELLKTDNRGDKLKDICL SFALCKLLRRKFAGVNASENERSKAQKLVFDGLIPDPERTFRVVRAELGFARDMSFTK YPILFSYGFPVVSVVLFAATLGVSLWIISSAIHHYRIPRKSTPNLVNGKNVDLIITFV IVFMVTAMDICEFFMHLFSDWTKVMVVSEYVRKRYVRCCLLDRILWLVCHGKLAETIG SSLGQFDLLNGAKKGYIPERIVRLYHMVRSFILLTDDKDYRIKKGKSLRPVPESVEKA LCETLLSNRKQLTQGLRLLTRSKLQAESEELLTYCQLAEIETIVVWHVATCKLEQQSP HEPVESYQVATALSKYCAYLVFYNPKLLPVGNTSVRHTCKTLVRHDSSCDRSCGGDDC MIRKGEALAAALLKGRELNKSSKEPGMWTELAEFWSELLISLAPFGSVGAHEKGLGDG GEFITHLWALLYHAGIDAKYSWSSASTASGESGGRADVYPFQNGMDTVSHAVN</aaseq>

Gene Sequence

<dnaseqindica>1..1245#3248..4210#atggcgccaccgccactcaagtaccggcactgcagcaatgtggacgggctggtctcggtggaggcgctgcgaatcatcgtggagaccaaggcttgcttcgtggcggtggcgctggcgctggcctacttcctgacggcgtcgcggcaccggctgtggagctccagccacctcatcaaggggttcctcttcgccgtgacgcagccggtgacccggttcctcgtcagcatgttcgccatgctgctctccatgccgttccgcaacgacctctacctgctctggggcatcctcctcctcgccggctacgagggcgtctacaccatctccggctacggcgtctccgcccgcctctccgacctcgccgtccacgagttcacgcgctgcagcaacattgtggtgctcggcctctacgtccggtactactcccatgcctcgcagttccggtacccgctctgggcgctctgggcactcatggtcgccaagttcttggagcggatcgtcctgttcaagaacggcaaccgaaagtacggtgacgggaacaccagccgcgtcgcggactacatgaagcacgagcacgagttgagcaacacagacgctgaagctggcggcttctccatggaggactacaagtaccttatcgttggcgactccaagttggaaaccacgatcgtcgatggtatgacctacgagccaaagttgacgccgccgattagacaaactcaagaagcggacgatacggtggtcgtcgtcaccgtcgataaggtgtggacgtgcaagggggagctcctcaagactgataatcgcggcgacaagctgaaggacatctgcctgtccttcgcgctgtgcaagctgcttaggcggaagttcgccggcgttaatgcgtcggagaacgagcggagcaaggcgcagaagctcgttttcgacggcctcatcccggacccggagcggacgtttcgagttgtccgggcagagcttggctttgcgagagacatgagcttcaccaagtaccccatcttgttcagctacggctttccggtcgtcagcgtcgtgctgttcgcagcgacgctcggcgtgtcactgtggatcatctcgtcagcgatccaccactaccggattccccgcaagagcacgcccaacttggtcaacggcaagaacgtggatctgattatcacttttgttattgtgttcatggttacggcgatggacatatgcgagttcttcatgcacctcttctccgactggaccaaggtatctcatacattttccttcttttttaacctttttgtagtggagtataaacatttgggcactatgataattattgcattttcatacgaacaagtttatctatgactaaaagatttttttcccattcataaaaggaaaagagattatcaagaccacactgtttaaatgatatagtccacaactttttttaaaaagaaaatgatatagtccacatgctcaggggcagtgcttttgcttcctccagcaattaagctaccaatcctactatattatagcttagtcatgattattggttctttaagtgattaagcttttaagtagctctttcgatgtactacaaatttaaatcattcgaccttgacgccttgtcccctctagttttctcagtctaggtccgccactgcacaagcttaatctcaacgtgattggttttttatatgtaggatatattttattcatgtacaagagagcgctattttttaaactagtccaaaagcctgtcacatgcatggttacgtattgatggcattatagaaagcctttactttgggtgtgtttagtttacgtcaaaattggtagtttggttggaattaaaaagatctgatgaaaaagttagaaatttatgtgtgtaggaaagttttgatgtgatgaaaaagttgtaagtttgaataaaaagtttagaactaaacaagactagagaatatttaattctcaccgttaaattggtagcagaaatacgctctgaatcaatcgttctatagtacttgaatgatccgtagggagccggtagcggtacgtcgactctgtaactcaaaaaaaaaaaaaaggagtaggcgcacggctggtgctaggctggttgcgcgttctcgttaggcaacgctcagcaaccatatcgttacaaactacttctgtttcttcttccgtttcagattataaaaaatagtgtctttggtaaaagttaaactgctttaaatttaattacgtttatagacaaatatagtaatatttagattaccaaattagttttattaaattaatatttaaatatatttttataataaatttttgattgaaaatattactattttttttataaatttagtcgcctgtttacttagatcatcatatataattaatgcgtgcattccattatcgcggaaatattcccccatggcacaccctgaatatggggccagaaattgcagaggagcaggatccgaagcggtggctgctacaagaatggaatattccaaagcattcgcttctgaaagaatttgaactaattgtgccacagtcgagcgtttttgtccaatcgcaacatagacacaatacaatgtctcactctccaaactaaaagcagtttgattttgactaaagtccgggagagtatatactgtacgcctttttctcttgcttaataaaattttggctagtttacgccggccagttgaaaaaaagttgattaattgaccaatatatatattaagaacaatgcgagatatgtgttaaattaatccatcgtcgtctattgtatgcctcaaaagtttttaatgtgcgttcgcgaaaaaaaagttttaatgtaaactcagctcacatattaaaaattaaataagacaaatctagtgtacaaacagtactggtactattcatagtcaaatttatctttcttttttccttctcaatgtataattcaatttgaactttatttgctgccaagtaatagatgtcattctactctatattgacaaaactttttagatttttttcacaatcatttgcattgaatttgagagaaaaaaattgtatacaagggcgcaacccctcaagattagaatcgatgtatgcatttttcatgttggttctaaacttcttatggagcaaactaaaaaaaggcctagctgatttcttatggagcaaacaatattttcactgaaaatgcgtgcattttcatgagagtttcccgacaaagtatatgtcctctgaactcgatctgcgttttcaggttatggttgtttctgaatacgtccggaaacggtacgtgcgatgctgtctccttgaccgtattctgtggttggtatgccacggcaagttagctgagacgatcggaagctccctaggacagttcgaccttctcaacggggcgaagaaaggctacatccctgaacgcatcgtcaggttgtaccacatggtgagatcgtttatcctgctcaccgacgacaaagactaccgcatcaagaaaggcaagagcctccggccggttccggagtccgtggagaaggcgctatgcgagacgcttctgagcaacaggaaacagttgactcagggtctgcgtctgctcacaagaagcaagctacaggccgagagcgaggagctcttgacgtactgccaactagcggagatcgagaccatcgtcgtgtggcacgtcgcgacgtgcaaacttgagcagcaatcgccgcatgaacccgtcgagagctatcaggtggccaccgcgctgtccaagtactgcgcctacctggtgttctacaatccgaagctgctgccggttggcaacacctctgttaggcatacctgcaagacattggttaggcatgacagcagctgtgacaggagttgtggtggcgatgattgcatgataagaaaaggcgaggcgctcgcggcggcgctgctaaaagggcgggagctcaacaagtcgtctaaagagccggggatgtggacggagctggcggagttctggtcggagctgctgatatcgctcgcgccgtttgggagcgttggcgcccacgagaaggggctcggcgacggcggcgagttcatcacgcacctgtgggctctgctgtaccatgcagggatcgatgccaagtactcttggtccagtgccagtactgccagtggtgaatctggcggcagagctgacgtttacccgtttcagaatggcatggataccgtgtcacacgcggttaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0141800, RefSeq:Os03g0141800