Os03g0145000

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0145000| Description = Protein kinase domain containing protein| Version = NM_001055481.2 GI:297600316 GeneID:4331599| Length = 3459 bp| D...")
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Gene Name

Os03g0145000

Description

Protein kinase domain containing protein

Version

NM_001055481.2 GI:297600316 GeneID:4331599

Length

3459 bp

Definition

Oryza sativa Japonica Group Os03g0145000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2473894..2477352

Sequence Coding Region

2474142..2477234

Expression

GEO Profiles:Os03g0145000

Genome Context

<gbrowseImage1> name=NC_008396:2473894..2477352 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2473894..2477352 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaagtgctagacacttgttcttcaccttgtccttctccttcttggcgctcttgagctgcattgccgtgtgcaatgccggtgacgaggccgccgcgttgctggccatcaaggcgtctctcgtcgatccattgggggagctgaaaggatggagctctgcgccacattgcacatggaagggcgtgcgctgcgacgcccggggcgcggtcaccggcctcaacctcgccgccatgaacctgagcggcgccatcccggacgacatcctcggcctcgccgggctcacctcgatcgtcctgcagagcaacgcgttcgacggcgagctgccgccggtgctcgtgtccatcccgacgctccgcgagctcgacgtcagcgacaacaacttcaagggcaggttcccggccggcctcggggcgtgcgcctcgctgacgcacctcaacgcgtccgggaacaacttcgccggcccgctcccggccgacatcggcaacgccaccgcgctcgagacgctcgacttcaggggtggcttcttctccggcggcatcccgaagacgtatggcaagctccagaagctcaagttcttgggcctctcgggcaacaacctcaatggcgctctcccggctgagctgttcgagctctcgtcattggagcagctcatcatcgggtacaacgagttcagcggcgcgatcccggccgccattggcaatctcgccaagctccagtacctcgacatggcgatcggcagcttagagggccccattccgccggagctcggccggctgccgtacctcaacaccgtttacctctacaagaacaacattggcggccagataccgaaggagctcggcaacctctcctccctcatcatgctcgacctctccgacaacgcgatcaccggcacgatcccgccggagttggcgcagctcactaacctgcagctgcttaacctgatgtgcaacaagatcaagggcggcatcccggccggcattggcgagctccccaagctcgaggtgcttgagctgtggaacaactcactcaccggcccgttgccgccgtcgctcggcaaagcgcagccgctgcagtggctggacgtgtcgacgaacgccttgtccgggccggtgcccgccgggctctgcgacagcggcaacctgacgaagctgatactgttcaacaatgtcttcacgggcgcgatccccgcggggctcacgacgtgttcgacgcttgtccgcgtcagggcgcacaacaaccggctcaacggcactgtgccgttggggctcgggcggctgccgcggctgcagcgcctggagctcgccggcaatgagctgtccggcgagatccccgacgacctggcgctctcgacgtcgctctccttcatcgacctctcgcacaaccagctgcggtcggcgctgccgtcgaacatcctgtccatccctgcgctgcagacgttcgcggcggcggacaacgagctgaccggtggcgtgccggacgagcttgccgattgcccgtcgttgtcggccctcgacctgtcgaacaaccggctatccggcgcgatcccggccagcctcgcgtcgtgccagaggctcgtttcgctgagcctccggaacaaccggttcacagggcagatccctgctgctgtcgccatgatgccgacattgtccgtcctcgatctctccaacaacttcttctccggcgagatcccgagcaacttcggcagctcgccggcgctcgagatgctgaacctggcgtacaacaacctcaccggccccgtgccggcgacggggctcctgaggacgatcaaccccgacgaccttgccgggaacccgggactctgtggcggcgtcctgcctccgtgcggggcaagctctctccggtcatcgtcgtcggaatcgtatgaccttcgccgctcacacatgaagcacattgccgctggctgggccatcggcatctccgccgtgattgcggcatgcggagccatgtttcttggcaagcagctgtaccaccggtggtacgtccatggcggatgctgcgacgatgccgccgtggaggaagaagggagcggctcgtggccatggcgcctcacggcgttccagcggttgagtttcaccagcgccgaggtgctcgcgtgcatcaaggaggctaacattgtcggcatgggcggcacgggggtggtgtaccgcgccgacatgccacgccaccacgccgtggtcgccgtcaagaagctgtggcgcgccgccgggtgccccgaggaggccaccacggtggacgggcggacggacgtcgaggcgggaggcgagttcgcggccgaggtgaagctcctcgggcggctccggcaccggaacgtcgtgcgcatgctgggctacgtgagcaacaacctggacacgatggtgatctacgagtacatggtcaatggcagcctgtgggatgcgctgcacggccagcggaagggcaagatgctgatggactgggtgtcgcggtacaacgtggcggcgggcgtcgccgccgggctcgcctacctgcaccacgactgccggccgccggtcatccaccgcgacgtcaagtcgagcaacgtcctcctcgacgacaacatggacgccaagatcgccgacttcggcctcgcccgcgtcatggcgcgcgcccacgagaccgtctccgtcgtcgccggctcgtacggctacatcgcgccggagtacgggtacacgctgaaggtggatcagaagagtgacatctacagcttcggtgtcgtcctcatggagctcctcaccggacggcggccgatcgagccggagtacggcgagagccaggacatcgtcgggtggatcagggagcggctgcgcagcaacaccggggtggaggagcttctcgacgccagcgtcggcggccgcgtcgaccacgtacgggaggagatgctgctggtgctgcgggtggcggtgctgtgcacggccaagtcacccaaggaccggcccaccatgcgcgacgtggtgaccatgctcggggaggcgaagccccggcggaagagcagcagcgccacggtggccgccaccgtcgtggacaaggacaagccggtgttcacgacgtcgcccgactccggttacctatag</cdnaseq>

Protein Sequence

<aaseq>MTSARHLFFTLSFSFLALLSCIAVCNAGDEAAALLAIKASLVDP LGELKGWSSAPHCTWKGVRCDARGAVTGLNLAAMNLSGAIPDDILGLAGLTSIVLQSN AFDGELPPVLVSIPTLRELDVSDNNFKGRFPAGLGACASLTHLNASGNNFAGPLPADI GNATALETLDFRGGFFSGGIPKTYGKLQKLKFLGLSGNNLNGALPAELFELSSLEQLI IGYNEFSGAIPAAIGNLAKLQYLDMAIGSLEGPIPPELGRLPYLNTVYLYKNNIGGQI PKELGNLSSLIMLDLSDNAITGTIPPELAQLTNLQLLNLMCNKIKGGIPAGIGELPKL EVLELWNNSLTGPLPPSLGKAQPLQWLDVSTNALSGPVPAGLCDSGNLTKLILFNNVF TGAIPAGLTTCSTLVRVRAHNNRLNGTVPLGLGRLPRLQRLELAGNELSGEIPDDLAL STSLSFIDLSHNQLRSALPSNILSIPALQTFAAADNELTGGVPDELADCPSLSALDLS NNRLSGAIPASLASCQRLVSLSLRNNRFTGQIPAAVAMMPTLSVLDLSNNFFSGEIPS NFGSSPALEMLNLAYNNLTGPVPATGLLRTINPDDLAGNPGLCGGVLPPCGASSLRSS SSESYDLRRSHMKHIAAGWAIGISAVIAACGAMFLGKQLYHRWYVHGGCCDDAAVEEE GSGSWPWRLTAFQRLSFTSAEVLACIKEANIVGMGGTGVVYRADMPRHHAVVAVKKLW RAAGCPEEATTVDGRTDVEAGGEFAAEVKLLGRLRHRNVVRMLGYVSNNLDTMVIYEY MVNGSLWDALHGQRKGKMLMDWVSRYNVAAGVAAGLAYLHHDCRPPVIHRDVKSSNVL LDDNMDAKIADFGLARVMARAHETVSVVAGSYGYIAPEYGYTLKVDQKSDIYSFGVVL MELLTGRRPIEPEYGESQDIVGWIRERLRSNTGVEELLDASVGGRVDHVREEMLLVLR VAVLCTAKSPKDRPTMRDVVTMLGEAKPRRKSSSATVAATVVDKDKPVFTTSPDSGYL </aaseq>

Gene Sequence

<dnaseqindica>119..3211#atttctctattgcttcaaacaaggcaatgaaaacacaaaactagaaacagtgtgtgtgagagagagagagaggggccagaggagtgtagaggacaagggaggaacagaagaaccgagcatgacaagtgctagacacttgttcttcaccttgtccttctccttcttggcgctcttgagctgcattgccgtgtgcaatgccggtgacgaggccgccgcgttgctggccatcaaggcgtctctcgtcgatccattgggggagctgaaaggatggagctctgcgccacattgcacatggaagggcgtgcgctgcgacgcccggggcgcggtcaccggcctcaacctcgccgccatgaacctgagcggcgccatcccggacgacatcctcggcctcgccgggctcacctcgatcgtcctgcagagcaacgcgttcgacggcgagctgccgccggtgctcgtgtccatcccgacgctccgcgagctcgacgtcagcgacaacaacttcaagggcaggttcccggccggcctcggggcgtgcgcctcgctgacgcacctcaacgcgtccgggaacaacttcgccggcccgctcccggccgacatcggcaacgccaccgcgctcgagacgctcgacttcaggggtggcttcttctccggcggcatcccgaagacgtatggcaagctccagaagctcaagttcttgggcctctcgggcaacaacctcaatggcgctctcccggctgagctgttcgagctctcgtcattggagcagctcatcatcgggtacaacgagttcagcggcgcgatcccggccgccattggcaatctcgccaagctccagtacctcgacatggcgatcggcagcttagagggccccattccgccggagctcggccggctgccgtacctcaacaccgtttacctctacaagaacaacattggcggccagataccgaaggagctcggcaacctctcctccctcatcatgctcgacctctccgacaacgcgatcaccggcacgatcccgccggagttggcgcagctcactaacctgcagctgcttaacctgatgtgcaacaagatcaagggcggcatcccggccggcattggcgagctccccaagctcgaggtgcttgagctgtggaacaactcactcaccggcccgttgccgccgtcgctcggcaaagcgcagccgctgcagtggctggacgtgtcgacgaacgccttgtccgggccggtgcccgccgggctctgcgacagcggcaacctgacgaagctgatactgttcaacaatgtcttcacgggcgcgatccccgcggggctcacgacgtgttcgacgcttgtccgcgtcagggcgcacaacaaccggctcaacggcactgtgccgttggggctcgggcggctgccgcggctgcagcgcctggagctcgccggcaatgagctgtccggcgagatccccgacgacctggcgctctcgacgtcgctctccttcatcgacctctcgcacaaccagctgcggtcggcgctgccgtcgaacatcctgtccatccctgcgctgcagacgttcgcggcggcggacaacgagctgaccggtggcgtgccggacgagcttgccgattgcccgtcgttgtcggccctcgacctgtcgaacaaccggctatccggcgcgatcccggccagcctcgcgtcgtgccagaggctcgtttcgctgagcctccggaacaaccggttcacagggcagatccctgctgctgtcgccatgatgccgacattgtccgtcctcgatctctccaacaacttcttctccggcgagatcccgagcaacttcggcagctcgccggcgctcgagatgctgaacctggcgtacaacaacctcaccggccccgtgccggcgacggggctcctgaggacgatcaaccccgacgaccttgccgggaacccgggactctgtggcggcgtcctgcctccgtgcggggcaagctctctccggtcatcgtcgtcggaatcgtatgaccttcgccgctcacacatgaagcacattgccgctggctgggccatcggcatctccgccgtgattgcggcatgcggagccatgtttcttggcaagcagctgtaccaccggtggtacgtccatggcggatgctgcgacgatgccgccgtggaggaagaagggagcggctcgtggccatggcgcctcacggcgttccagcggttgagtttcaccagcgccgaggtgctcgcgtgcatcaaggaggctaacattgtcggcatgggcggcacgggggtggtgtaccgcgccgacatgccacgccaccacgccgtggtcgccgtcaagaagctgtggcgcgccgccgggtgccccgaggaggccaccacggtggacgggcggacggacgtcgaggcgggaggcgagttcgcggccgaggtgaagctcctcgggcggctccggcaccggaacgtcgtgcgcatgctgggctacgtgagcaacaacctggacacgatggtgatctacgagtacatggtcaatggcagcctgtgggatgcgctgcacggccagcggaagggcaagatgctgatggactgggtgtcgcggtacaacgtggcggcgggcgtcgccgccgggctcgcctacctgcaccacgactgccggccgccggtcatccaccgcgacgtcaagtcgagcaacgtcctcctcgacgacaacatggacgccaagatcgccgacttcggcctcgcccgcgtcatggcgcgcgcccacgagaccgtctccgtcgtcgccggctcgtacggctacatcgcgccggagtacgggtacacgctgaaggtggatcagaagagtgacatctacagcttcggtgtcgtcctcatggagctcctcaccggacggcggccgatcgagccggagtacggcgagagccaggacatcgtcgggtggatcagggagcggctgcgcagcaacaccggggtggaggagcttctcgacgccagcgtcggcggccgcgtcgaccacgtacgggaggagatgctgctggtgctgcgggtggcggtgctgtgcacggccaagtcacccaaggaccggcccaccatgcgcgacgtggtgaccatgctcggggaggcgaagccccggcggaagagcagcagcgccacggtggccgccaccgtcgtggacaaggacaagccggtgttcacgacgtcgcccgactccggttacctatagtagaaaagttggtttttcaccggaggatctgacgtgacagacgcgaatacttggcattagcggacgtgtttgtttttgtacctatagttcttgtaatctgctgctacctttttacatagttctgatttacatttggtcctgttcaggggctacgaattgatgtaaacaatgtttatacttttttacaattttaggatgtaaaggaaatcaatgggaccatctatacatttgtcgacgaattttcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0145000, RefSeq:Os03g0145000