Os10g0157933

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0157933| Description = Conserved hypothetical protein| Version = NM_001189103.1 GI:297727336 GeneID:9271059| Length = 5218 bp| Definition ...")
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Gene Name

Os10g0157933

Description

Conserved hypothetical protein

Version

NM_001189103.1 GI:297727336 GeneID:9271059

Length

5218 bp

Definition

Oryza sativa Japonica Group Os10g0157933, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3614562..3619779

Sequence Coding Region

3614562..3614574,3614676..3615118,3617700..3617825,3618379..3618786,3618871..3619311
,3619399..3619779

Expression

GEO Profiles:Os10g0157933

Genome Context

<gbrowseImage1> name=NC_008403:3614562..3619779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3614562..3619779 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaatcaacaattgatcgaagttggatgtatgcgaaaaatttgaaacgtcattctacggagtacagaaagggtgtaataaattttatgaacgccgcggaggaggatcagataagaagaaacaatgattacatgtgttgtccatgtgcagattgcaagaatgagaatatgtttgatagcagagaggacgtacagggtcatctgatacaacgaggattcatggagcgctatacatgttgggtgaagcatggagagcaagaatcaggaagtggagcagcagtagacagaagtggtgcgcataatcaggaagatgaagatgagcatgacatgtttataccttctccattggacggtgaaatggttgatgtggatcacgatctgctgcaagacatgttacgtgacgttgaggacccagcccagaatgagagagatggaatgaagttcagcaggttggtcgagcaggtattcgacataaaagacccttcaaacaagaagatgcacatcgtgacggatggaaagcgccaaattgtagaagttgacaacgtcattgatgaagaagaatacaaccataatcttcatgttatgggcaatgcttggaagaacttcaagactaagctagtcggcgagttcgtctacaacccgacgaatccagatccaagagagaaatttccttggatcacggaacaggtctgggaggaattccatgcgaagaagttgacccccgagtccagagctagaagcgaggcatatcgcttgctccagaccaggaaccagcatccgcactggcttggcaccgccggatatgccggtaaggaagaggaatggcagcgtgaggatgaagaagcggaggaatcgaacacgccgcttgtgtttggtgatatcccacacccacgagctaggaactgggccagggccaggtaccagaagaatgatgatggcacaatcttcatgccaaatgcagaagatcaacgagtgtacgaagctatattggttgctgagcaacaagcctcgcaagaggcccgctctcaaagacgcgaggacgacgtcctcacgaaagcgttgggcaacaaggaacaccgtggatggacatggggcgttgggtcttctgttccctggaagtatggatttccagactacgcgtggcagtacaagaagtggacttccaacaaggcggagaaagatgcacgccttgaagccaagatccgagcgtcgataagagctgagctgacatctgaattcgacgaaaatctagagtcgatgagggccaagattaggcaagagatccgagaagagcaaaagaacccccaggccgccgctgctgttgcgcacgaagagttaggaagtcccacccaaaaacgtagcagttgcgcatcaactgagttggcagaaaatccaacatcggtcgacagcgccgtcgaccacataatggaactaacgagctgcaccctcacagttaggatgatgccgaccttcacgattccagcagccgagggacttgcgtacaagccgaccccagagacaagagtgcatggagtgcaacttagggccgactatgcaaaagttcaagtcgactcggtgaagcccgaatacgagctgttccctctgaagtatccaccaaacgacgaggtcctctcactaggaaatgcccatggtaccttcatccaatggcgcaaggacctcattgagatcaaggttacagcgaggccaaccattgcaccaggcggtcgtccaccaaagagacccgcctctgctccttcagcccctcctgctcaagatcgtcatgcacaatcttacgatgtgcagttgtag</cdnaseq>

Protein Sequence

<aaseq>MDQSTIDRSWMYAKNLKRHSTEYRKGVINFMNAAEEDQIRRNND YMCCPCADCKNENMFDSREDVQGHLIQRGFMERYTCWVKHGEQESGSGAAVDRSGAHN QEDEDEHDMFIPSPLDGEMVDVDHDLLQDMLRDVEDPAQNERDGMKFSRLVEQVFDIK DPSNKKMHIVTDGKRQIVEVDNVIDEEEYNHNLHVMGNAWKNFKTKLVGEFVYNPTNP DPREKFPWITEQVWEEFHAKKLTPESRARSEAYRLLQTRNQHPHWLGTAGYAGKEEEW QREDEEAEESNTPLVFGDIPHPRARNWARARYQKNDDGTIFMPNAEDQRVYEAILVAE QQASQEARSQRREDDVLTKALGNKEHRGWTWGVGSSVPWKYGFPDYAWQYKKWTSNKA EKDARLEAKIRASIRAELTSEFDENLESMRAKIRQEIREEQKNPQAAAAVAHEELGSP TQKRSSCASTELAENPTSVDSAVDHIMELTSCTLTVRMMPTFTIPAAEGLAYKPTPET RVHGVQLRADYAKVQVDSVKPEYELFPLKYPPNDEVLSLGNAHGTFIQWRKDLIEIKV TARPTIAPGGRPPKRPASAPSAPPAQDRHAQSYDVQL</aaseq>

Gene Sequence

<dnaseqindica>1..13#115..557#3139..3264#3818..4225#4310..4750#4838..5218#atggatcaatcaagtgagtaatattaatcattaattgagcaatttcatcacgtcttacttttgcaatactaatcttataatatgtgcctctaatttgttttttttattttgtagcaattgatcgaagttggatgtatgcgaaaaatttgaaacgtcattctacggagtacagaaagggtgtaataaattttatgaacgccgcggaggaggatcagataagaagaaacaatgattacatgtgttgtccatgtgcagattgcaagaatgagaatatgtttgatagcagagaggacgtacagggtcatctgatacaacgaggattcatggagcgctatacatgttgggtgaagcatggagagcaagaatcaggaagtggagcagcagtagacagaagtggtgcgcataatcaggaagatgaagatgagcatgacatgtttataccttctccattggacggtgaaatggttgatgtggatcacgatctgctgcaagacatgttacgtgacgttgaggacccagcccagaatgagagagatggaatgaagttcagcaggttggtcagtgattccgagacgcctttgtacgttggatgcaaagcaaaacacactaagttgtcagttaccttggatctaataaagctgaaagcaagtagtggatggacagacaagagttttacagatcttttaggaattttgaaggctatgcttcctgttgagaacacattgcccgagataacatacgaaggaaagcaggttctgtgtccacaagggttagaggtccgtaaaattcacgcttgtcccaacgactgcatattgtaccacaagcaatatgcagacttggatgcttgtcctgtctgcaaggcttctcgatacaagcgaaagaaaagtgctgacgaaggaaataaatcaaagaggggtggtccagcaaaggttgtgtggtatctacctatcattgattgtttcaagagaatctttgctaatccgaacgaagcgaagttagtacgttggcacgccacggagagaaggaatgacagtatgcttagacacccatcggattcgattgaatggaggaatatcgatcgaaaacataaagactttgctgccgaccctagaaacatgaggatatgtctgtgtacggatggcatgaatcctttcggtgacatgagtagtactcacagcacttggctagttcttattgcgaactataacctcccaccatggttatgctttaaacggaaatatattatgttgtgtttgttaatccaaggtccgaggcaacccggcaatgatatcgatgtattcctagagcctgttatcgacgatctagaaattctttggaaataaggtgtggaaacttgggatgcatatggtcaggagaacttcatgctaagagttctattgttctgcaccattaatgactaccctgcactcggtaatctttccggacaaactataaaaggaaagaaggcatgctccgattgcaaggaacatacacgaagctggtggctaaagaaatcatgagagatggtatacatgggtcaccggaggtggctcccgctacgtcacgcatttagaagaaagaagaaaatttttaacggtaagagagaacttcagcctgctcccaaagatttgtccggagatgaggtccacaatatggtcaaggacataagcaatgagtttgggaagaaaagaaaacatagcaagacaaaggagaagggtatgtggaagaaaaaatctatattttggcggctaccttactggaaagatcttgatgtccgtcattgcattgatctcatgcatgtagaaaagaatgtgtgtgagagtttggttggcctgatgttgaatattcccgggaagacaaaggacgggttgaacgcgcgccttgatctataggacatgaatattcgcagtgaactccagcccatacgagatgcagagacaggtagagtgtacctccctccagcctgccacacactgtcgaaggatgagaagatcgcaatgttatgatgcttgaaggatattaaagttccatcgggcaattcagcgaggacaagtaagtatgttaaattggacgatctaaaacttgttggaatgaagtctcacgattgccatgtgctaatcacacaaatcttgccagttgctattagaggcattctactaccgaaagtgcgtcacacgatccaacgtctgtgcaccttcttcaatgcaattggacagaaggttatagatccagaagatctagatgggttgcagaccgatattgtgaatacccttgtcacctggagatgttttcccactttctttctttgatataatggttcatctccctgtttatctggtgaagcaaacaaaactatgtggcccggcttttctaagggaaatgcggccgtttgaaaggtacatgggagttctaaagtcgtacgttcgtaacagagctaaacccgaggggagcatcattgaaggttacacgaccgaggaggctattgagttctgtgtcaattacatgtccgatgccgatcctatcggagttcctgcgtctcgtcacgagggaaggttgtcaggtgttggcacaatcggaaggaaaagaattaggcccgatcaagcatcgtacgcgcaggctcattacgctgtgctccaacatatggcagaagttggcccatactttaaggagcacttagcaaaaatccgagatgagaacttgaggcgatctgatgcatggattaacagagaacataattctcggttcaatgaatggttcaagaatcgtgtgacaatgtccacggatgtccaaaatgagacagtacagttgttggggatgggaccgtcttggaccgtagacacatggcaaggatacgatataaatggatacacattttacaccgtcaaacaagatgacaaaagcacagtgcaaaacagcggcgtccgtatagatgcattccaggatcaagttgggtcaaacacatactacggccgcattgaggatatctgggagctaaactacgtcaagttcaaggttcctttgttctgcttccgttgggtgaatctacgcactagtgtcaaagccgacaaggaaggtttcactttagtagatctatctaaggtgggatacgccgatgaaccatttgtacttgcgaaacaggtcgagcaggtattcgacataaaagacccttcaaacaagaagatgcacatcgtgacggatggaaagcgccaaattgtagaagttgacaacgtcattgatgaagaagaatacaaccataatcttcatgtaagacctcacattgaccttgacgatgatccccaagagcctgtggcatatgctcattcagatcatatggaaggcataaccttgtgactgatgcatttatacttatctattgtaatgaatgaagtattttgttttattgcaaagacttgatatgtgtagtcattaatatggctaattttagtttattacaaatgaccaaaataaaagttgtagatcctgatgagaggatcaactttgttgttgaccatatttcaatttgaaatcatttagtatttacaaatgctgttaattagatttgtcatattgtcaaaatcaatttcaagctgttgggaaaaaattatatagaaaaatgaccaaaataaaactagtagatcttgaaatgctctacaattttgttgttgaccatatttccatttgaaatcatttactatccaaaaatgtattatagctaataaaatgaattattacacaacagctatatattttgcactcacaacaaatgaaagatggaaaatgagtcatcggtgatcaaaatatatattttgctttcaaggttatgggcaatgcttggaagaacttcaagactaagctagtcggcgagttcgtctacaacccgacgaatccagatccaagagagaaatttccttggatcacggaacaggtctgggaggaattccatgcgaagaagttgacccccgagtccagagctagaagcgaggcatatcgcttgctccagaccaggaaccagcatccgcactggcttggcaccgccggatatgccggtaaggaagaggaatggcagcgtgaggatgaagaagcggaggaatcgaacacgccgcttgtgtttggtgatatcccacacccacgagctaggaactgggccagggccaggtaccagaagaatgatgatggcacaatcttcatgccaaatgcagaagatcaacgagtgtacgaagctatagtaagtgtctagtcaaactagatgttcacattgtttcccatcgtgcagtttatttaaccccactaaattgtaatacagaagtagttggttgctgagcaacaagcctcgcaagaggcccgctctcaaagacgcgaggacgacgtcctcacgaaagcgttgggcaacaaggaacaccgtggatggacatggggcgttgggtcttctgttccctggaagtatggatttccagactacgcgtggcagtacaagaagtggacttccaacaaggcggagaaagatgcacgccttgaagccaagatccgagcgtcgataagagctgagctgacatctgaattcgacgaaaatctagagtcgatgagggccaagattaggcaagagatccgagaagagcaaaagaacccccaggccgccgctgctgttgcgcacgaagagttaggaagtcccacccaaaaacgtagcagttgcgcatcaactgagttggcagaaaatccaacatcggtcgacagcgccgtcgaccacataatggtaaaagtgaacttactcaatacatgaaagacttaacgaatccatatgatatataatattctaaaaaaattgattaatctatcgcaggaactaacgagctgcaccctcacagttaggatgatgccgaccttcacgattccagcagccgagggacttgcgtacaagccgaccccagagacaagagtgcatggagtgcaacttagggccgactatgcaaaagttcaagtcgactcggtgaagcccgaatacgagctgttccctctgaagtatccaccaaacgacgaggtcctctcactaggaaatgcccatggtaccttcatccaatggcgcaaggacctcattgagatcaaggttacagcgaggccaaccattgcaccaggcggtcgtccaccaaagagacccgcctctgctccttcagcccctcctgctcaagatcgtcatgcacaatcttacgatgtgcagttgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0157933, RefSeq:Os10g0157933