Os10g0158100

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0158100| Description = Similar to Senescence-associated protein 15| Version = NM_001070731.2 GI:297610132 GeneID:4348145| Length = 4205 bp|...")
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Gene Name

Os10g0158100

Description

Similar to Senescence-associated protein 15

Version

NM_001070731.2 GI:297610132 GeneID:4348145

Length

4205 bp

Definition

Oryza sativa Japonica Group Os10g0158100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3636323..3640527

Sequence Coding Region

3636323..3636342,3638054..3638114,3638938..3640527

Expression

GEO Profiles:Os10g0158100

Genome Context

<gbrowseImage1> name=NC_008403:3636323..3640527 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3636323..3640527 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccacggcggcagtgatggagcgcgagcgcctcacggcggagatggccttcccgccggccgtcgtggcggccggcggcggcgccagctgcaagccgggcgcggagccgcggagcatcgtgatcaagatccgccgccggctgccggacttcgcccgctccgtcaacctcaagtacgtcaagctcggcctcctctccgccggcttcccgatgccgccgtcgccgtcgtgggtggtgatgctcgcgctcgcggcggccgcggcgtacggcctgttcgacgttgccgcgctctacgccgtcgacctcgtcggctgcgccgcgtggctgtgcgcggcggcgctgctcgtcgccgtctggtacgccaggcggccgcggccagtgtacctcgtcgagttcgcctgctacaagccggacggcgacgagcacgagatcagcaaggacgggttcctcgagatgacggagagcacggggttcttcaatggcgaggcggtcgcgttccagaccaagatcacccgccgctccggcctcggcgaccggacgtacctgccgccgggcatccaggcgcggccgccgcggctgtccatggcggaggcgcgcgccgaggcggaggccgtcatgttcgggtgcctcgacaagctgttcgccgccacgggcgtcgacccgagccgcgacgtgggcatcctcatcgtcaactgcagcctcttcaacccgacgccgtcgctggcgtccatggtggtgaaccgctaccggatgcgcgaggacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgggctcatcgccgtcgacctcgcccgcgacctcctccaggccaacgccggcgccctcgccgtcgtggtgagcaccgagaacatcacgctcaactggtacttcggcaacgaccgctcgatgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgctgctgtcgagccgcggcggcgacgcgcggcgagccaagtaccggctgctccacacggtgcgcacccacaagggcgccgccgacgggtgcttcggcagcgtgtaccagcgcgaggacgaacgcgggagggtgggcgtgtcgctggcgagggagctcatggcggtcgccggcgacgcgctgaagacgaacatcaccaccctcggcccgctcgtcctcccgctcgccgagcagctcaagttcctccggtcgctggtgctccggcgggtgctccgccgcggcgcgcggcgcccctacatcccggacttccggcgcgcgttcgagcacttctgcgtgcacgccggcgggcgcgccgtgctggaggaggtgcagcggagcctcggcctcggcgacggcgacatggaggcgagcaagtgcgcgctgcacaggttcgggaacaccagcagcagctcgctctggtacgagctcgcctacgccgaggccaaaggccgcgtccgccgcggccaccgcgtctggcagatcggcttcggctccggcttcaagtgcaacagcgccgtctggcgcgcgctccgcgacgtgccgcccgtctcctccggcgccggcgacggcgaggaggagcgccgccgcgtaattgttattgtcgctattatacgacttttcgaaaaggaccaattgactcttcggaaccaaaacatcgtatctagatga</cdnaseq>

Protein Sequence

<aaseq>MASTAAVMERERLTAEMAFPPAVVAAGGGASCKPGAEPRSIVIK IRRRLPDFARSVNLKYVKLGLLSAGFPMPPSPSWVVMLALAAAAAYGLFDVAALYAVD LVGCAAWLCAAALLVAVWYARRPRPVYLVEFACYKPDGDEHEISKDGFLEMTESTGFF NGEAVAFQTKITRRSGLGDRTYLPPGIQARPPRLSMAEARAEAEAVMFGCLDKLFAAT GVDPSRDVGILIVNCSLFNPTPSLASMVVNRYRMREDVKSFNLGGMGCSAGLIAVDLA RDLLQANAGALAVVVSTENITLNWYFGNDRSMLLSNCIFRMGGAAALLSSRGGDARRA KYRLLHTVRTHKGAADGCFGSVYQREDERGRVGVSLARELMAVAGDALKTNITTLGPL VLPLAEQLKFLRSLVLRRVLRRGARRPYIPDFRRAFEHFCVHAGGRAVLEEVQRSLGL GDGDMEASKCALHRFGNTSSSSLWYELAYAEAKGRVRRGHRVWQIGFGSGFKCNSAVW RALRDVPPVSSGAGDGEEERRRVIVIVAIIRLFEKDQLTLRNQNIVSR</aaseq>

Gene Sequence

<dnaseqindica>4186..4205#2414..2474#1..1590#atggcgtccacggcggcagtgatggagcgcgagcgcctcacggcggagatggccttcccgccggccgtcgtggcggccggcggcggcgccagctgcaagccgggcgcggagccgcggagcatcgtgatcaagatccgccgccggctgccggacttcgcccgctccgtcaacctcaagtacgtcaagctcggcctcctctccgccggcttcccgatgccgccgtcgccgtcgtgggtggtgatgctcgcgctcgcggcggccgcggcgtacggcctgttcgacgttgccgcgctctacgccgtcgacctcgtcggctgcgccgcgtggctgtgcgcggcggcgctgctcgtcgccgtctggtacgccaggcggccgcggccagtgtacctcgtcgagttcgcctgctacaagccggacggcgacgagcacgagatcagcaaggacgggttcctcgagatgacggagagcacggggttcttcaatggcgaggcggtcgcgttccagaccaagatcacccgccgctccggcctcggcgaccggacgtacctgccgccgggcatccaggcgcggccgccgcggctgtccatggcggaggcgcgcgccgaggcggaggccgtcatgttcgggtgcctcgacaagctgttcgccgccacgggcgtcgacccgagccgcgacgtgggcatcctcatcgtcaactgcagcctcttcaacccgacgccgtcgctggcgtccatggtggtgaaccgctaccggatgcgcgaggacgtcaagtcgttcaacctcggcggcatggggtgcagcgccgggctcatcgccgtcgacctcgcccgcgacctcctccaggccaacgccggcgccctcgccgtcgtggtgagcaccgagaacatcacgctcaactggtacttcggcaacgaccgctcgatgctgctgtccaactgcatcttccgcatgggcggcgcggcggcgctgctgtcgagccgcggcggcgacgcgcggcgagccaagtaccggctgctccacacggtgcgcacccacaagggcgccgccgacgggtgcttcggcagcgtgtaccagcgcgaggacgaacgcgggagggtgggcgtgtcgctggcgagggagctcatggcggtcgccggcgacgcgctgaagacgaacatcaccaccctcggcccgctcgtcctcccgctcgccgagcagctcaagttcctccggtcgctggtgctccggcgggtgctccgccgcggcgcgcggcgcccctacatcccggacttccggcgcgcgttcgagcacttctgcgtgcacgccggcgggcgcgccgtgctggaggaggtgcagcggagcctcggcctcggcgacggcgacatggaggcgagcaagtgcgcgctgcacaggttcgggaacaccagcagcagctcgctctggtacgagctcgcctacgccgaggccaaaggccgcgtccgccgcggccaccgcgtctggcagatcggcttcggctccggcttcaagtgcaacagcgccgtctggcgcgcgctccgcgacgtgccgcccgtctcctccggcgccggcgacggcgaggaggagcgccgccgcgtgagctgcaacccgtgggtggacagcgtggagagctacccgccaaaagcatacatttgatgatcttttgtgattgctgtcgttcagttgcaatccacgagatttgcatgatgactatacacgtacccagcagaacgctacactaattattagacttgctcaactagtgtgttgttaaatattctgttaatcaatttgtctttcagattatagggccacagtttgaaatttaaatatatgcatgtaacaatttctttttttcaactgtgtatatatatacgaattctttatatatgccaaattttgtcagcgaggagccggggattcgagtaagcaagaagaatatttgcccgaccttcacgacctaggaacaattgctctgatttcttgcaaaaatactccatccgtttcaaaatgtttgacaccgttgactttttagcacatatttgaccgttcgttttattcaaaaatatttatgaaatatgtaaaactatatgtgtacatgaaagtatatttaacagtaaattaaatgatatgaaaaaaataaataattacttaaattttttgaataagttaaatggccaaacacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagtagataaaatagttgtgatgaaactgttaggcaagtaggtgaggtaggcttgacactccagcaaaaatacatgcaacttcacttgagtctaagcaagtataaccttcagaggagattttgtcaatgttggggtgcatctgaatgtgcaagaaattcaaatatcttgaacttgaagtctatctgcatgcaggtaattgttattgtcgctattatacgacttttcgaaaaggaccaattgactcttcggaaccgtacgtcggcatccgctgaatttggtcaaattaaccttctcatcattgttttggatcgttctataacattaggtttctgacctaaaattatccttattatatatgtagaatttggcttccatcaaaatcacgtgtacaccgtttctgaaaatttgcaaactggggaggtacgacgagggtgttctacaatattttactgctaagagtaacacctaattaatattgccgacttgatctgtagtatgtatcatttcacactaacgaaaaattgacgtttattattctttcactttcttaatcgaatgttttgattaccaactttcgttttagcattaattgggatgtgaaactacgtttaatttatattatataaataatagaaagcacagtttgaaagctgtagaggacattttttcgatgggattgttgtcaacttgtttggcaagaagacaatcacgattgggacatctaaacgccttgcggtgattgtagagtcgctaaccacctcaatctagcaaaaagctagactaagatatgttttgttagattaaaccggctagcggagttaatttagatagaacgatagataactacccgtctcgtgggcaaacagaaagtttacgggacaaatctacaaatgatttcgaactctcgtagcgaaggcagacgatttatagtgcaaagcgacaaagatggacgaactaaactagaaatagattgaaataatgaaaaagcaattcaataggcctgtatgtagattatatgttatttttacaattgaatctgacttgtcccttatataggggttggtcttgcctcctacaagttctgctccacttctaactcggggtagaaccaatggaaacctgatcgagtaaggaaactcgagacccgacgaaaacagactcggcatcggactctgctggtctgaacgaccacatgccgtcggtcagactggccaatacacagcggtcagaccggctctgtggaggaaaccggcgactttcccaaatcttggcaattttccttattttgaatctaggtaccaaatttgggtgtaaacagggataactatacattttctactcaagcgtatgtgtgaccttttttggtacttgacacatagtaaaaagagaggctgtgtttttttagatttagtggaaatctaaaaaaacagagagataggggtcgggtaagttgaacatgggttcgcatcctctatcataatggcacatgtgggcaaaaaataaaaagtgagacccacatggcagtaagtctaatggtaatgacattatggcagaggatccttacccgctaaacgtatagcactcgatgaaaattaattatttgatctacaagatgggtttttgaacaccaattttacaacaggagtaattttaactacacatgtactatgcctccgtcccagaatacttatcattttaggttgtttagcatatattaaggttaggaggaaagactataataccccttaataaataatgtacagttggatgtagaatggtggttgggggtagaatggggagaaattttaattagaagtggttaatgtgacaagtagtacgtacttcaaagtgacaactattttggaacaacttttaaatgctagaaagatacggagtaaatattgtgggacggaaaaaatatattatatatcacatactgatctacgctgtcatgttttttctagaaaacatcgtatctagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0158100, RefSeq:Os10g0158100