Os03g0146400

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0146400| Description = Similar to Lethal leaf-spot 1 (Fragment)| Version = NM_001055493.1 GI:115450714 GeneID:4331611| Length = 3796 bp| D...")
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Gene Name

Os03g0146400

Description

Similar to Lethal leaf-spot 1 (Fragment)

Version

NM_001055493.1 GI:115450714 GeneID:4331611

Length

3796 bp

Definition

Oryza sativa Japonica Group Os03g0146400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2554945..2558740

Sequence Coding Region

2555266..2555661,2555763..2555998,2556086..2556212,2556739..2556875,2557016..2557175
,2557377..2557655,2558299..2558553

Expression

GEO Profiles:Os03g0146400

Genome Context

<gbrowseImage1> name=NC_008396:2554945..2558740 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2554945..2558740 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgtgatggctccgaccgcatctcttctcctctccccgaggccgctgccggcgagccgccgggtcccctcgctcccggcgctctcggcttccggtcgcctgcgcctccgccgcgcccgcgccgacacacggctccgcgtggcggcgccgccgtccgtccccggggaggcggaccaggcgcccggggagaccgagccgagcacgtcgtcggccgacgagaagttcgtgtggagggaccactggtaccccgtgtccctcgtcgaggacctcgaccccagcgtgcccaccccgttccagctcctcaaccgcgacctcgtcatctggaaggacccaaaatccggcgagtgggtcgccctcgacgaccgttgcccccatcgcctcgcgcccctctcggaggggcggatcgatgagacggggtgcttgcagtgctcataccacggctggtcattcgatggctccggcgcgtgcacccggatcccgcaggcggcgcccgaggggccggaggccaaggctgtgaggtcgccgaaggcgtgcgcgatcaagttccccaccctcgtctcgcaagggctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccgatgttaccgaaggagtttgaggatcctgcgttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaacgtctctgatccgtcgcatatagaatttgctcaccacaaggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatcaagtggtgcatggggatattcagggtcaaattctggaaaccctcgcatcagtgcaacttttgtggccccttgctatgcactgaacaaaattgagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctctttcaacattccaatggccccagggaagactcgttctatagtttgtagtgctcggaactttttccagtttagcatgccaggaaaagcatggtggcagcttgtccctcgatggtatgagcattggacttcaaatttggtctatgatggtgatatgatagttctgcaagggcaagagaagattttcttgtctgcatcgaaggagtcttctgcagatattaatcagcagtacacaaagatcacgtttacacccacgcaggctgaccgttttgttttggcattccgggcatggctaaggaaatttggtaacagccaacctgactggtttggaaatcctagccaagaagtgttgccttccactgtcctttcaaagcgtgagatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcatacaacgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttctgtgcaactgctgggattcctgcggatgttcagttcagattattgcttgccgctgctgctttggttagtgccgctgtagcgtacgcattttatacgctccagaagaattttgtatttgtagattacgtgcatgctgagattgattaa</cdnaseq>

Protein Sequence

<aaseq>MPVMAPTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADT RLRVAAPPSVPGEADQAPGETEPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLL NRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRI PQAAPEGPEAKAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKATATKPPMLPKEFED PAFSTVTIQRDLYYGYDTLMENVSDPSHIEFAHHKVTGRRDRARPLPFKMESSGAWGY SGSNSGNPRISATFVAPCYALNKIEIDTKLPIFGDQKWVIWICSFNIPMAPGKTRSIV CSARNFFQFSMPGKAWWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLSASKESSADI NQQYTKITFTPTQADRFVLAFRAWLRKFGNSQPDWFGNPSQEVLPSTVLSKREMLDRY EQHTLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFRLLLAAAALVSAAVA YAFYTLQKNFVFVDYVHAEID</aaseq>

Gene Sequence

<dnaseqindica>322..717#819..1054#1142..1268#1795..1931#2072..2231#2433..2711#3355..3609#aaccacggactcctcctccacctccgtttcctactctcttcttcagtttctcacctctccgcacgagaaaattcgaatcccccttccggctgctggttttcgtgccagaaacaggcgattttaccagtgccagttagctctcgccttcctcctcctccatcgtgctactactctgttcttctggaagaacactggtctcctcgcctacctcagtcaccactcaccacaccaggtgcgagctataaaaaccggcacgccaaaaatcttcaaaaccacacagaaacctcagatctccgaggcttcccaagcgagtcgacgaaaatgcccgtgatggctccgaccgcatctcttctcctctccccgaggccgctgccggcgagccgccgggtcccctcgctcccggcgctctcggcttccggtcgcctgcgcctccgccgcgcccgcgccgacacacggctccgcgtggcggcgccgccgtccgtccccggggaggcggaccaggcgcccggggagaccgagccgagcacgtcgtcggccgacgagaagttcgtgtggagggaccactggtaccccgtgtccctcgtcgaggacctcgaccccagcgtgcccaccccgttccagctcctcaaccgcgacctcgtcatctggaaggacccaaaatccggcgagtgggtcgccctcgacgaccgttgcccccatcgcctcgcgcccctctcggtatgagtatcgccacgcgcccttccaatctcttcctcttttgcgccaattttgatccgattgaattcacggcgatgatctggatgtctgtgtgttcgtaggaggggcggatcgatgagacggggtgcttgcagtgctcataccacggctggtcattcgatggctccggcgcgtgcacccggatcccgcaggcggcgcccgaggggccggaggccaaggctgtgaggtcgccgaaggcgtgcgcgatcaagttccccaccctcgtctcgcaagggctgctcttcgtgtggcccgacgagaatgggtgggagaaggccacggctaccaagcctccgatgtgcgtgtatattctggattagtggtttattgattgagtttggttaaggtcgtcggtgacgaggtttgatcctgtttttgattccaggttaccgaaggagtttgaggatcctgcgttctccacggtgaccatccagagggatctgtactatggctatgatacattgatggagaacgtctctgatccgtcgcatatagaatttgctcaccacaaggtaatgctacattttttatttgagaatgatcagttactttaatgtactggcacgcaatgctagtcctggatattgcacatttgagatatgaggatggtttgttgtgtaccgtacttgcacatcatacctcaatttggttttagtagttctatttttggttgaatctcttaacagtggcttctggtggactatgattgccaatgttttgttttgaactgcctgttgcaccttgatatgaaaatgtagctgcagcatcgttcagtctctttacttaagctactggctagtgctaaaattgaataatacttacttaatcgaggctactgtattaactgtctgttatggattcatggtacatggactagaggtatgattcattatctaagatgcactttcagtaaatccacaacttagaccatttgtcttcccttcattattcatggagcaaaagtacgattcccatggccaaagaaattggttaactaggcagcattatccttgcctcaaaatttaactcctctcacaggtcactggtcgaagagatcgagccaggcctttgccattcaagatggaatcaagtggtgcatggggatattcagggtcaaattctggaaaccctcgcatcagtgcaacttttgtggccccttgctatgcactgaacaagtatgttcagcaaaacactctaatcatgccttttcccatttcattgcatttgccttttgatgtgaattagctcatatatcagtttcacatccagtaactccacttatgattctgatcttttagtatttcgttttttgtagaattgagatagacacaaagttacccatttttggagatcagaaatgggtcatatggatttgctctttcaacattccaatggccccagggaagactcgttctatagtttgtagtgctcggaactttttccagtttagcatgccaggaaaagcatggtggcaggtatctgcaatttttgtagctctctctatttacctccttttcaatctacttgttagtgccctttttaggaaaacagcagtaaagatccccgctctattaaaaattagagtgaattttatgctctcattatatccgaaagtataaagtaaaaccctgaatcccctgttcttatacatttgcttctttgtgtatgtgatgcagcttgtccctcgatggtatgagcattggacttcaaatttggtctatgatggtgatatgatagttctgcaagggcaagagaagattttcttgtctgcatcgaaggagtcttctgcagatattaatcagcagtacacaaagatcacgtttacacccacgcaggctgaccgttttgttttggcattccgggcatggctaaggaaatttggtaacagccaacctgactggtttggaaatcctagccaagaagtgttgccttccactgtcctttcaaagcgtgaggtaaaaatttctgggatctagttatgtgagagcatttatgcagttttattttgaagctagtctttagatggtttaaggaatttagttatgtttactaccttgctcgcaagaactttttacgcgctgattccataaagtatttgacactatcctccttgcatgaactttgtttttttttttttggacacaaaacaaaaggtttgatgttgttcattatgggcacagataattgatttccatgaagtatttttgcacactactccttccatgaaccttgatatattgttttggacacaaaacaaaggttttatgttgctcattattggcacgatttttttttgtttctgtgctatattttaattgtcatacttactggcgcctttagctgtgaagctcagtaatgtactttaaaatatctatggaggtatgatagctttgaagtactcatagtacctgacatttgaggatttaaccacagcagttccacatatttgaagattcaaccacagcagttccttgtaaatttcaacttatacttcctatgaaaaacatgttcatttatgcttgcgtttctatgtattcttcaatccttgtatccttatatttgactatatgttgaccgagttgcaaattacctatgcagatgctagatagatatgagcagcacacactgaaatgctcatcttgcaaaggggcatacaacgccttccagactctgcaaaaggtcttcatgggagcgacagtggcgttctgtgcaactgctgggattcctgcggatgttcagttcagattattgcttgccgctgctgctttggttagtgccgctgtagcgtacgcattttatacgctccagaagaattttgtatttgtagattacgtgcatgctgagattgattaaacaagcatgacatctgatctgagatctggtgaagcgacatcacacgatcatttgtgcaacgtaagctagggaatatagattgtcggtggatatagtctaatgttgcattgtaggcaataggtttgtaatttgtattagctcttcggagatgatgtacaaaagttgaaatgaaaaatgtaattttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0146400, RefSeq:Os03g0146400