Os03g0146900

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0146900| Description = Conserved hypothetical protein| Version = NM_001186337.1 GI:297721804 GeneID:9267849| Length = 6556 bp| Definition ...")
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Gene Name

Os03g0146900

Description

Conserved hypothetical protein

Version

NM_001186337.1 GI:297721804 GeneID:9267849

Length

6556 bp

Definition

Oryza sativa Japonica Group Os03g0146900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2587062..2593617

Sequence Coding Region

2587062..2587081,2587611..2587716,2588451..2588819,2588971..2589114,2589210..2590085
,2590830..2590985,2592143..2592325,2592439..2592582,2592810..2592945
,2593070..2593617

Expression

GEO Profiles:Os03g0146900

Genome Context

<gbrowseImage1> name=NC_008396:2587062..2593617 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2587062..2593617 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacatgctatgacctcaccgttgatgatttcctccctccacgctaccatagggtgaagcgaatgtggaaagaggccaaggcgacgtttgcggcggagaaggatgccctgaagctggccagcaagggccctatggatcagaggctggctgacatttacaccacggaggaccacaatgatcggcggattaggataatcagtgtactcgaagctattctggaacgctacaaacgtcaggcaatgcgttcctatgtcaagcgggtgaatgcgtttcttctacctcccgatggcgtgcaccggactatccaaaagctaaggcttcatacctttggcagagggtggagtgtattcattcagagatggattatcgccacgatcggcaggtggggagtcaaagattttgagctcgacgttgaagaacccggcgtcagccttaactttcgcaagatactggatggatcccagaatgtgcagctggaacggctagtgctgtccaattggtatatttacttccttggcgtttcggaggctcaccaaactctccttggattaaagaatttgctggtggacaactgcaaatttgggaaaatctatctggatgtgctcccttgtcttgaaacttttgtttgccggggccagcagccaaccaaactgtactatggtgaggtgcctcagcttaggcatgtgtggattgagccaatggctctacccagcccgttgagtcatctcagaaagctattcattgcaaacgtgccaatgatttgggatatattctggattgtcgccctccttgacgccgcccctgtcctggagtcatgccatgttcatattgacaacacgtcggaaaagatggcttcttgggtagacgtgcaagcacaagagcgtcagtaccattgcctgaatgagctggtggggtggcaaatcgggtttgttaagcatgtcgtgaaggcgtcgccatggctgagacgggtgcacctgctcgacgggcacgtcgttgaagacgacgagcaggtacaaaccctcagatccgccgccgccgcccgctcgctcggtcagccactgacgatcagatcagatggcttcagaggagacaagtgcacgatgctaccgccgtctcaagaagcctacgacgtctgcacagtcaccggcgcctcctcctccaagcggggcagcgcggcgtacgaggcggagaaggcggcgtacctggcggcgaggaggagcgccacggaggagacgaaggagaggatgcagcagtggacgaggaggacccgcccgctcttggaaagtatcatgcgacgctacgagcgctgcgcgaagcgctgcgcgatgcgccgctacgtcaagcgggtggacgcgttccttctgccgcctcccgacgacggcgtccgcagaactatccgaaagctaaggcttcagacccgtagcggcagtggcaggtggagcgagtgcatccagcgatgggtcaccgcggcgatcggcaggtggggagccgaggatctcgagctcgacgtcgaagagcaccgcgtcgactatgacttccgtgtgctggatgaatgccagagcatgcggctaaagcggctcgtgctgatcaactgcaagccgattggtatatttgattgcttgatgcttcggtggctcaccaagctcgagttgtgcaaagcttcgtattatggaggggctagtcgtattctgtcaaactgtgtgtctctggtggacttcagtatcagacattgccgaagctcccagcctattcttcagttcagtgtgccagattctgggtttaagaagttgctggttgacaactgcgaatttgtggaaatctatctggattcgctgccttggcttgaaacttttgcttgccggggcgtgcagcctaccgaggtgtactatggcgaggtgcctcgacttaggcatgtcagtttggactacttaaaaaccaaggttgagccttctgcagttagcaacacaacatatcgactcagcaaattcgtcatgagtatgccatcgatagagagcctcgttctacagttcaaagggccggaggtttggattgagccaatagctttacccagcccgttgcttcatctcaagaagctattcattgcaaatgtgccaatgaattgggatatattctggattgtcctcctgcttgatgctgcgcctgccctggagccatgccatgttcacattgacaatgggtcggtaaagatggcttcttggctagaggtgcaagcacaacagcatctgtaccatcgcctgaaggatctcaccatcgtcggcttcagtgcagtggggtggcagatcggctttgttaagcatgtcatgaaggcgtcgccaaggttgagacgggtgcacctgatcgacgggcacgtcgttgaagacgacgacgagcaggtgattgggggcttggaggtagtcccacatcagcgggagtggcacgagtttgagaggtcagaggtgctcgatgacctccgggatgggatctactccccacaacttgaaataattctaattgacaatgtgacatatcataggactactgatctgaataagttaccaagatcaaactcaagattcatccggctccaatccctaacaccaccaccaacagacatccaccgaataattgccaaaggatacaagttgccctaccttagtagagtacagagtgcataccagtag</cdnaseq>

Protein Sequence

<aaseq>MTCYDLTVDDFLPPRYHRVKRMWKEAKATFAAEKDALKLASKGP MDQRLADIYTTEDHNDRRIRIISVLEAILERYKRQAMRSYVKRVNAFLLPPDGVHRTI QKLRLHTFGRGWSVFIQRWIIATIGRWGVKDFELDVEEPGVSLNFRKILDGSQNVQLE RLVLSNWYIYFLGVSEAHQTLLGLKNLLVDNCKFGKIYLDVLPCLETFVCRGQQPTKL YYGEVPQLRHVWIEPMALPSPLSHLRKLFIANVPMIWDIFWIVALLDAAPVLESCHVH IDNTSEKMASWVDVQAQERQYHCLNELVGWQIGFVKHVVKASPWLRRVHLLDGHVVED DEQVQTLRSAAAARSLGQPLTIRSDGFRGDKCTMLPPSQEAYDVCTVTGASSSKRGSA AYEAEKAAYLAARRSATEETKERMQQWTRRTRPLLESIMRRYERCAKRCAMRRYVKRV DAFLLPPPDDGVRRTIRKLRLQTRSGSGRWSECIQRWVTAAIGRWGAEDLELDVEEHR VDYDFRVLDECQSMRLKRLVLINCKPIGIFDCLMLRWLTKLELCKASYYGGASRILSN CVSLVDFSIRHCRSSQPILQFSVPDSGFKKLLVDNCEFVEIYLDSLPWLETFACRGVQ PTEVYYGEVPRLRHVSLDYLKTKVEPSAVSNTTYRLSKFVMSMPSIESLVLQFKGPEV WIEPIALPSPLLHLKKLFIANVPMNWDIFWIVLLLDAAPALEPCHVHIDNGSVKMASW LEVQAQQHLYHRLKDLTIVGFSAVGWQIGFVKHVMKASPRLRRVHLIDGHVVEDDDEQ VIGGLEVVPHQREWHEFERSEVLDDLRDGIYSPQLEIILIDNVTYHRTTDLNKLPRSN SRFIRLQSLTPPPTDIHRIIAKGYKLPYLSRVQSAYQ</aaseq>

Gene Sequence

<dnaseqindica>6537..6556#5902..6007#4799..5167#4504..4647#3533..4408#2633..2788#1293..1475#1036..1179#673..808#1..548#atgacatgctatgacctcaccgttgatgatttcctccctccacgctaccatagggtgaagcgaatgtggaaagaggccaaggcgacgtttgcggcggagaaggatgccctgaagctggccagcaagggccctatggatcagaggctggctgacatttacaccacggaggaccacaatgatcggcggattaggataatcagtgtactcgaagctattctggaacgctacaaacgtcaggcaatgcgttcctatgtcaagcgggtgaatgcgtttcttctacctcccgatggcgtgcaccggactatccaaaagctaaggcttcatacctttggcagagggtggagtgtattcattcagagatggattatcgccacgatcggcaggtggggagtcaaagattttgagctcgacgttgaagaacccggcgtcagccttaactttcgcaagatactggatggatcccagaatgtgcagctggaacggctagtgctgtccaattggtatatttacttccttggcgtttcggaggctcaccaaactctccttgggtaaaagatcatttcttggagcggctgttagtattttgagaaactgtgtgcatctagtggactttagtatcagatatgatccagtatttgactgtcctcttcgtttcaatgtgccaacatctagattaaagaatttgctggtggacaactgcaaatttgggaaaatctatctggatgtgctcccttgtcttgaaacttttgtttgccggggccagcagccaaccaaactgtactatggtgaggtgcctcagcttaggcatgtgagtttggactacttgtaaaccgcaggcaacaacattggcccctctgttagccacacaacatatccatggagcaaattcgtcaagaggatgccgcctgtagagagcctcgttctgcagttcaaagggcctgaggtgagcgatctatatatattcttgaaatgtgctaacagtatatttggcctctcgtctctaagtgaaattgcgttgccttttcttgtgtgcaggtgtggattgagccaatggctctacccagcccgttgagtcatctcagaaagctattcattgcaaacgtgccaatgatttgggatatattctggattgtcgccctccttgacgccgcccctgtcctggagtcatgccatgttcatgtatgcagtttattgatcatatatacatcacaaacgtgtctttattctcctattatacacttccatttcttcttgattacatctgtaccaacaatttcgaaatctgaatgcagattgacaacacgtcggaaaagatggcttcttgggtagacgtgcaagcacaagagcgtcagtaccattgcctgaatgagctggtggggtggcaaatcgggtttgttaagcatgtcgtgaaggcgtcgccatggctgagacgggtgcacctgctcgacgggcacgtcgttgaagacgacgagcaggtacctgggggcttggaggtagtcccacatcggcgggagtggcacgagtgtgagaggtcagaggtgctcgatgacctctgggatgggattagctcgccccaactcgaaataattctgaactgattaactgagccacagggtatgcataacagtgtagtataaaatgatgtttgacctgtaaatgaacttgtgtgttatttgttcatgctgctgcgtctttgcccttgctcatttttgttgtcgctgagcggagggtgattgagacgaatgcagatatagcagacgaagcaacctgcatttttctgtgtttttcttgaaagttgaagttgcaaagagtagggtggggaactgaagaatgctatggcaatctggagttcagatttgttctggttggttactgaactctgtgctcttccatgttgggtggttcttccgtgcgtaatttagaccatgtacaaaacttaaagaccttacgattgaatttaagatgagaaatgcttagagatctttcggctagttccacatggtgatgggctagacgatctgggttcgtagcctcaccccttctaattagtatttgatattagacactttcttaatattcgcgtcttttttgattgaatttaagacggagtatgaatcaaaagttctagctacatttttatacaactgcaagatcacaaagtttagatttgttttttttcaatcattttgtcccattcggtcgccgattttctgttctttttttctccaaaagaaactaagttcatcttgtcagattaacacgtttgccatacaaatcgattggattcggtttgcgattttgcattatttctccaaccttagacacttgcatcttagattattagggagaaggctggatatatgtaagggaacttctggaatgtcttgtttgggggagcttctagctgctgcagcttctcctagaatcaacagctctctcaaacagtccggcttaattttagtctagattctaacaagcagttgtagaattcagaaaatgaactaaacgaagctgagaaacctagtttttctagattcttataagctggctttaggtaaacatatgcatgcgggcagcccgtgtcctgcaacttccagcacgccggcataaactcttccgtgcatatatgcaggtacaaaccctcagatccgccgccgccgcccgctcgctcggtcagccactgacgatcagatcagatggcttcagaggagacaagtgcacgatgctaccgccgtctcaagaagcctacgacgtctgcacagtcaccggcgcctcctcctccaagcgggtacagaaaaaatagggtttcacttttactgtagaaactttttagtccctcattttcgggaaactattctaatctctcgaggagatgtttcctcgtttgtttaacaaccatctaaacggttatgaaaaattttagaaaaatttgacaacattcatacaacacatatatataactccacaaaatcttaagtccaaactcaactcacacgtcgagatataaaaaagacaaattcagcgtatgaatagtagcgtactgtttatatctaaatttgtcttttttgtttctcgatgtgtagatcgaatttgaacatgaattttggtggattagtaggcatcattatactctatattgtcaatttttttcagaatttttcacaactatttgcatcgaatttgaaagatatacgaggggatatcccctcgagggattagaatccactcccctcattttctgcaagaactcacgttaattaccgtaatcttgttggttccatcttcttcttccctagatgcgtatgagccaagatcagcacaacattgacgaggacatgatcagcagcttacctgacggcatactcctcctgatcctcgacaggctagacgcgcgatcgacgatagccaccaccatcctctcgaagcgatggcttcgtctccctcggcgctcccacacgtgctacgacctcgccgtcgacgacatcctcccccccacgctaccaccgggtgaggcgcgcggctgtggacggagggcagcgcggcgtacgaggcggagaaggcggcgtacctggcggcgaggaggagcgccacggaggagacgaaggagaggatgcagcagtggacgaggaggacccgcccgctcttggaaagtatcatgcgacgctacgagcgctgcgcgaagcgctgcgcgatgcgccgctacgtcaagcgggtggacgcgttccttctgccgcctcccgacgacggcgtccgcagaactatccgaaagctaaggcttcagacccgtagcggcagtggcaggtggagcgagtgcatccagcgatgggtcaccgcggcgatcggcaggtggggagccgaggatctcgagctcgacgtcgaagagcaccgcgtcgactatgacttccgtgtgctggatgaatgccagagcatgcggctaaagcggctcgtgctgatcaactgcaagccgattggtatatttgattgcttgatgcttcggtggctcaccaagctcgagttgtgcaaagcttcgtattatggaggggctagtcgtattctgtcaaactgtgtgtctctggtggacttcagtatcagacattgccgaagctcccagcctattcttcagttcagtgtgccagattctgggtttaagaagttgctggttgacaactgcgaatttgtggaaatctatctggattcgctgccttggcttgaaacttttgcttgccggggcgtgcagcctaccgaggtgtactatggcgaggtgcctcgacttaggcatgtcagtttggactacttaaaaaccaaggttgagccttctgcagttagcaacacaacatatcgactcagcaaattcgtcatgagtatgccatcgatagagagcctcgttctacagttcaaagggccggaggtgggcaaatcatatgttcctgaaatgaaaaatataagtgtagtaatgggctcttgtctctaagtgaaaattgtgtttctttttcttgtgtgcaggtttggattgagccaatagctttacccagcccgttgcttcatctcaagaagctattcattgcaaatgtgccaatgaattgggatatattctggattgtcctcctgcttgatgctgcgcctgccctggagccatgccatgttcacgtatgcaaatttattgatcatatatattataacctaacaaccatgtcatttctcttaaagatccgcttcattttttgtggaatatatctgtttttttttacggaatggaatatatctgtgaattcacatgaactctgaaacctaaatgcagattgacaatgggtcggtaaagatggcttcttggctagaggtgcaagcacaacagcatctgtaccatcgcctgaaggatctcaccatcgtcggcttcagtgcagtggggtggcagatcggctttgttaagcatgtcatgaaggcgtcgccaaggttgagacgggtgcacctgatcgacgggcacgtcgttgaagacgacgacgagcaggtgattgggggcttggaggtagtcccacatcagcgggagtggcacgagtttgagaggtcagaggtgctcgatgacctccgggatgggatctactccccacaacttgaaataattctaattgacaatgtgacatatcataggactactgatctgaataagttagtttctgtccagcttcataatactatgatatgtcacatatccaaccaaacttatattttggaacaaagggattaagagagagatttttttaaaccaagccatcatttgctaatgctatattaagaggagggtaattttaccatgtttgaaaaagtacttagaaataccatattttctagtgtaaaatttaataccttaggtatcaaaaattttagtgtaaaatttaggtaactcgagataatttttcaagaactgtaaaatttcatacatcgagataccaagaagtaactagagatacccaagtttcacactagaaatatctctgtaccttattaagactgataaaactacccataataggaacagctaatctgtggacgtttggccggcacgaacaccttctgattcggactacggctgctgcctggtatatactgcatgctcatagtagacaacacaactcggggaattgaagatcatacatgaatgatggacgtgtttatcgatggaagaatcaacacagattttgcacacacaatcttaattactaatatcaaattcatcactttattggtgatactagtacatatatgtagggtggttacaatttaacaaagagggcaaaaaaaaaacaaaacactaagaacaactgattattagagcaaggaccgaaacacaaacatcgtacatccatataccatttcaccatcctctttatgtctaacatcatacagccaagatcaaactcaagattcatccggctccaatccctaacaccaccaccaacagacatccaccgaataattgccaaaggatacaagttgccctaccttagtagaggtaaaagtcgtcgactatggaggccatgcatagccattcctccccaagaagaagtagcttagctagcctccatggccaccattagcccacgctctataggcgtgtgaagcacggccacccattgcacggacacactccaaaattaagaacaagatgatggtagttatcgcatgacataagctaagaagatcttgtggattacatgatgcatatgcatggataatgtggagtgtgccctgcccttgagcatacgtgggcttaagaggggggagaagaggaagctcccattgggtgcttttatttggaagtattggtgcctctttgagatttgaggggctttctgcaggaaatcatttctttagttaaaagtgccttttgtacctaaatcagtgcaattttgcatcaacagacattagctttccattaactgaaacctgctccacaatactctcaatgattacaattcagtgaattcaccctcatgagccatgtctgtaataattcttgcacacgtattacttgtatgtagtacagagtgcataccagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0146900, RefSeq:Os03g0146900