Os10g0158400

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Revision as of 08:31, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0158400| Description = Similar to Chalcone synthase J (EC 2.3.1.74) (Naringenin-chalcone synthase J)| Version = NM_001070732.1 GI:115481207 ...")
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Gene Name

Os10g0158400

Description

Similar to Chalcone synthase J (EC 2.3.1.74) (Naringenin-chalcone synthase J)

Version

NM_001070732.1 GI:115481207 GeneID:4348146

Length

1978 bp

Definition

Oryza sativa Japonica Group Os10g0158400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:3675806..3677783

Sequence Coding Region

3675806..3676001,3676783..3677783

Expression

GEO Profiles:Os10g0158400

Genome Context

<gbrowseImage1> name=NC_008403:3675806..3677783 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:3675806..3677783 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctggagcaactaccgccgctattgttgacagccgccgcggcacacaacattcggaaggtcctgcaacgatcctcgccatcggcactgcaaacccggaaaacatcatgtttcaggataactttgccgactactactttggtctaaccaaaagcgagcaccttaccgagctcaaggaaaagatgaagaggatatgtcataaatctggtatagaaaagcgctacatccaccttgacgcagagcttatcagtgtccacccagagatcattgacaaacatttgccctcccttgaaactcgtgtagacatcgtggctactgaggtccccaagcttgctgagtccgctgcgcggaaagccattgctgagtggggccgtccggccactgacatcactcaccttatcttcagcacctactcaggctgtcgtgcacctagtgccgacctccaattggcttcgttgctcggactacgcccttccgtttctcgcaccattctcagtctccacggttgctcaggtggtggcagggcactccaactcgcaaaggagatcgccgagaataaccgcggtgctcgtgtcctcatagcttgctccgagctgacactgatatgcttctctaccccagacgaaagcaaaatcattggccatggactgttcggggatggtgctggcgcagtcatcgtcggtgccgatccctcagtcgatggtgagtgcccgctattcgagatggttgccgcctcacaaaccatgataccaggaaccgagcacgcgctcggcatgcaggccactagtagtggaatagattttcacctctccatccaggtgccgacactgataaaggacaacatccatcagtgcttgctcaatgcgtttcgatctgttggaaacacagatcctaactggaacgacctcttctgggcagtgcaccctggcggtcgcgcaatccttgataacatagaagacaagctccaactgcatccatgtaagcttgcggcaagccgccaagtgttgagcgagtacgggaacatgagtggtgcaacaattgcattcgttcttgatgaactacggcgccgtcgggagaaggaacaagacatacagcaacaacctgagtggggagtgttgctggcctttggacctggagtcacaatagagtcaatcgtgctgcgtaacccactctcacgtggtttgaaggaaaattaa</cdnaseq>

Protein Sequence

<aaseq>MPGATTAAIVDSRRGTQHSEGPATILAIGTANPENIMFQDNFAD YYFGLTKSEHLTELKEKMKRICHKSGIEKRYIHLDAELISVHPEIIDKHLPSLETRVD IVATEVPKLAESAARKAIAEWGRPATDITHLIFSTYSGCRAPSADLQLASLLGLRPSV SRTILSLHGCSGGGRALQLAKEIAENNRGARVLIACSELTLICFSTPDESKIIGHGLF GDGAGAVIVGADPSVDGECPLFEMVAASQTMIPGTEHALGMQATSSGIDFHLSIQVPT LIKDNIHQCLLNAFRSVGNTDPNWNDLFWAVHPGGRAILDNIEDKLQLHPCKLAASRQ VLSEYGNMSGATIAFVLDELRRRREKEQDIQQQPEWGVLLAFGPGVTIESIVLRNPLS RGLKEN</aaseq>

Gene Sequence

<dnaseqindica>1..196#978..1978#atgcctggagcaactaccgccgctattgttgacagccgccgcggcacacaacattcggaaggtcctgcaacgatcctcgccatcggcactgcaaacccggaaaacatcatgtttcaggataactttgccgactactactttggtctaaccaaaagcgagcaccttaccgagctcaaggaaaagatgaagaggatatgtaagtagatcgataattgcacttatcatcattattattaatcattttttactaactctaatatgaaaaatttgcaaatgcttgcatatcgcggagtatcctgctatcattcgctataaaccatacataaataatatatttatggtatgtagagaaaaacaaggctataaaccttaacatttagatagggacctatagaaattaaatgtgtgattttaattttcttaagaaaagtgctttcattatatcatatattagttttttaattgttcgaacaaaaaaataattgttactgtcatggttttgttaaatatgatagctgttccacctattgtcgcgtcctcaccctaccatcacacatgcaagcaacagaactcgtgtacatataagtaaggaaacttacaaagattaatccatgcatcttactgaaatagcactcacatatgatttggaaattagtgggtagagttatggatgcacgactacgtcgtcagacaaatcatgtactgttcgaataaaactcatgtactatgacgctcttctgaaaatttaaacatgtatatcttcctaaatatttggatagggcatacagagaaatcaaatgtgtggttaagtttcttaaggaaagtgcttgcatgtaattattcaagcaaaaaataattggtattcatattttaatttgaagcatgtataaatgcccaataatatgttttattttttatgtaacctcacgattacaagtaataacaaatatacacgtgagtttctatttccatttcaggtcataaatctggtatagaaaagcgctacatccaccttgacgcagagcttatcagtgtccacccagagatcattgacaaacatttgccctcccttgaaactcgtgtagacatcgtggctactgaggtccccaagcttgctgagtccgctgcgcggaaagccattgctgagtggggccgtccggccactgacatcactcaccttatcttcagcacctactcaggctgtcgtgcacctagtgccgacctccaattggcttcgttgctcggactacgcccttccgtttctcgcaccattctcagtctccacggttgctcaggtggtggcagggcactccaactcgcaaaggagatcgccgagaataaccgcggtgctcgtgtcctcatagcttgctccgagctgacactgatatgcttctctaccccagacgaaagcaaaatcattggccatggactgttcggggatggtgctggcgcagtcatcgtcggtgccgatccctcagtcgatggtgagtgcccgctattcgagatggttgccgcctcacaaaccatgataccaggaaccgagcacgcgctcggcatgcaggccactagtagtggaatagattttcacctctccatccaggtgccgacactgataaaggacaacatccatcagtgcttgctcaatgcgtttcgatctgttggaaacacagatcctaactggaacgacctcttctgggcagtgcaccctggcggtcgcgcaatccttgataacatagaagacaagctccaactgcatccatgtaagcttgcggcaagccgccaagtgttgagcgagtacgggaacatgagtggtgcaacaattgcattcgttcttgatgaactacggcgccgtcgggagaaggaacaagacatacagcaacaacctgagtggggagtgttgctggcctttggacctggagtcacaatagagtcaatcgtgctgcgtaacccactctcacgtggtttgaaggaaaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0158400, RefSeq:Os10g0158400