Os03g0152100

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Revision as of 12:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0152100| Description = E2F dimerization factor| Version = NM_001055525.1 GI:115450778 GeneID:4331648| Length = 4554 bp| Definition = Oryza...")
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Gene Name

Os03g0152100

Description

E2F dimerization factor

Version

NM_001055525.1 GI:115450778 GeneID:4331648

Length

4554 bp

Definition

Oryza sativa Japonica Group Os03g0152100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2848836..2853389

Sequence Coding Region

2848836..2849152,2849751..2849827,2849937..2849980,2850692..2850769,2850843..2850989
,2851077..2851145,2851319..2851417,2851516..2851586,2853152..2853389

Expression

GEO Profiles:Os03g0152100

Genome Context

<gbrowseImage1> name=NC_008396:2848836..2853389 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2848836..2853389 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtctccggcgtcgcccaccgcccggacgacgacggcgggcgcgccgcctcgacgttccagcgcccgccgcagccggccggcgcgcggccgtccctggccacgccgccgccctcgggcggagcgcaatccgcttcgacgagcggcgggagcgcgggctccccgtccagccgcagcgagcagcatgtccccgcagccgcaggcatggcggcgggggcggcggcggcctctactccgattagtgagaataccttcctccgcctcaacgaccttgacatccacggcgacgatgcgccttcctcacaggctccaacgagcaagaagaagaagagaggagcacgagcagttggtcctgacaaaggtggcagggggctgcgccagtttagtatgaaagtttgtgagaaagttgaaagtaaagggagaacaacatacaacgaggtggcagatgaacttgttgccgaatttgcagatcccaataacagcattttgccaccagatccggataatcccaatgcacaacaatatgacgagaaaaatatacggagaagggtttatgatgctctgaatgttctgatggctatggagattatatctaaagataaaaaggaaattcagtggaaggggttgcctcgaaccagtataaatgatattgaagatttgcagacggaacttgtaggactgaaaagtaggattgagaagaaaaatacatatttgcaggagctgcaagaccaatttgtaggtatgcaaaagttgatacaaagaaatgaacagctatatggttcaggaaacattccctcgggtggagttgcattaccatttatccttgttcagacacggcctcatgcaactgtggaagttgaaatatcagaagatatgcaacttgtacattttgactttaatagcacaccatttgagttgcatgatgactcatttgtactgaaagcaatgagttcttgtggagaagaacaaatcgacggtattcatgatctaatttcaaatggaggtgagagctcaagcatgccaaatatttataggcagcaagtgcagcaacctgcaagatcaactaatggtacagctagattgccaagctcaccccctattccaggaatactgaaagggcgagtgaagcacgagcattag</cdnaseq>

Protein Sequence

<aaseq>MVSGVAHRPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQS ASTSGGSAGSPSSRSEQHVPAAAGMAAGAAAASTPISENTFLRLNDLDIHGDDAPSSQ APTSKKKKRGARAVGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNN SILPPDPDNPNAQQYDEKNIRRRVYDALNVLMAMEIISKDKKEIQWKGLPRTSINDIE DLQTELVGLKSRIEKKNTYLQELQDQFVGMQKLIQRNEQLYGSGNIPSGGVALPFILV QTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSFVLKAMSSCGEEQIDGIHDLISNG GESSSMPNIYRQQVQQPARSTNGTARLPSSPPIPGILKGRVKHEH</aaseq>

Gene Sequence

<dnaseqindica>1..317#916..992#1102..1145#1857..1934#2008..2154#2242..2310#2484..2582#2681..2751#4317..4554#atggtctccggcgtcgcccaccgcccggacgacgacggcgggcgcgccgcctcgacgttccagcgcccgccgcagccggccggcgcgcggccgtccctggccacgccgccgccctcgggcggagcgcaatccgcttcgacgagcggcgggagcgcgggctccccgtccagccgcagcgagcagcatgtccccgcagccgcaggcatggcggcgggggcggcggcggcctctactccgattagtgagaataccttcctccgcctcaacgaccttgacatccacggcgacgatgcgccttcctcacaggctccaacgaggtcagcgtttggtttgccagttttcgccgcggggttgcgtttttttcccaatgttattacaagattttaagattttgagaatttggttggtttttgtttttctctgtagctgtacgctacttaaaatgctccggagatgcaccgggtggttaaaattgtccgtagtgttgtaattagctgtgtttgggctgcaaaatgcttagggaagtgtatcctgccatcactttgatgtgtggttgcaagtaagattttctggggatgcttatacgattatgctctgtaggtttaccttgctgaaagtgttaattctatatatatacggagtagttctcatctgtagtctattacacgtgtatactgtactcacgatgatcagtaaaacatcagtcatgtgacctcttttgctacatagattccagactgtagaacactgctgtttggatgccagtgcatgtttttctgcattatgaatttggaagtacgacttggcagaagttctctacctcttaaggctccttttcaaaaaataaatcccttcattgttatctagttttgtgcatttgcaataagggtttttgctatgaataaaattattcagcaagaagaagaagagaggagcacgagcagttggtcctgacaaaggtggcagggggctgcgccagtttagtatgaaaggtgtgttaaatcccatttgttccctattagtacaccatttgagtttatttataagcaccacaagtatgtgctataaaaactcatgatgacactgtttgttcttttgcagtttgtgagaaagttgaaagtaaagggagaacaacatacaacgaggttagtgctttcctctttctaccgagttcatgtatcttgttctgagcatctgatggcatcatgtacgtggtcacatcacatggattgaagcagcaaattgagatcacaaatgttgcatgtgtcagctccctgtttctttgcatagttgtcttcttgttaactctatccttgaagattcaatcagttatttcaagaggacttaggctatgtatgcaatgtaaaacctaatagcaatatatgcacagggcaggactagctattgctccaataagccaacatgttcatattgtccgtccacctggtggtattgtcaaacaattcattatctataaaactgccatgttccgcatcatgatttggggctataaaattggtaactcactcacatgtcttatgtaacactgctgtttgatcagcttgctcagatcttactatggtgatgtgttgtaatatgtgacatccaccatattgatcattgtaaatccgctatacatatcaccctcttctactgttatatttaaactaacaatctgtctttgcatctattcatgttcatgtttggagttcctcaaaattgctaaaaactatcatattttgtctctctggcaaaaagttgtaataattttggctatgcatttgttgatagttttcaatgtttacccttattggtgaagtccaagtctcatagtccttctgacttatctttatcaggtggcagatgaacttgttgccgaatttgcagatcccaataacagcattttgccaccagatccggataatcccaatgcagttgagaaatgacttgcctgcatcaccaattatttcttaagtcagttgtatgctcactttgtgttaaatgcagcaacaatatgacgagaaaaatatacggagaagggtttatgatgctctgaatgttctgatggctatggagattatatctaaagataaaaaggaaattcagtggaaggggttgcctcgaaccagtataaatgatattgaagatttgcaggtttttcgtcttcttttcccactggttatcgacatttgatgtacttttggtagtcatatttattaatttatttatgctcttttacagacggaacttgtaggactgaaaagtaggattgagaagaaaaatacatatttgcaggagctgcaagaccaagtaatgatatagctcaacctgcttttctttagtcatgtccaatgcaatatataaaatgaactgttctactgagctagcagtgtaccatagtcttcaaattgtgtggctttagtggtagatactgtgatacacataatgcccttactcggtaacattgtttttggcatgttaagtttgtaggtatgcaaaagttgatacaaagaaatgaacagctatatggttcaggaaacattccctcgggtggagttgcattaccatttatccttgttcaggtgaatagttcataaattctttgtcttctattctcttgtttcatggcactgtttcctgcacatgacttcaggctaaatgacaagaatgaatcatgcagacacggcctcatgcaactgtggaagttgaaatatcagaagatatgcaacttgtacattttgactttaataggtaaaacaagaatcctgttattctctcccatctggtcacacctttacaatttatctagcaagccacacctttctctttctgtttccatttttctattctttcatgatatgattgcagaaggtcctcactggaagggcatcctcttatctcatttaaattctggcagtggtcttttaacccttaaaatataatataattcactctgtaaaaaagaactaaaatctcagctgctatatcaaatttggatggtagagatttttgtctccaaacctctagtgatgggacggtacaagcggaagtgtaaataatgtgacttttgaaaagtgttgttagcttttattggttgagctaagtcatctagttttagtccaattacaggtcgcaggtcctcattatcctagtgacatttgccatatcactaattcttgaataatagggagacattggcatcctaaattgggaagatgagagcccaagtgtgaaattcattttacttttctaaaagagtaaattgcattcacggtacaagaatttgttaggtgggtgcattctattgtaagaacttgaaaactgaacaaactggctcaccaacttgactagacggtgcgcttttggtcaaggtgaataccacacggaattttcggccacgttagcaagacatgtcattcatgtaacatgtttttgcttcttccttcaaacgacagatagactgaaggttcattttagcaaatatccccagttcaatggtaacaatatcaaatcaaaagctctataggtctagatttagctttgatagagggcactgtaatctcttgattgatgcatgaatcaattcatagttatactgtcaattgaacaatgaaactagacagtagaaatttagcttgatctaaaaggccaacgcttgcttcgagaagactagcatcaccatcacccgccaccaccactgacgaagcacacagtaacatctttgagttagctagcctgttcgatttttgcctatatatttccaaagtttgatcatgtgaacaggaatgatatgcattgccacatcttgccgtagatgatctagcttcacaagattcatagttcaccaaaagtaatggatcaacctgggagtcgtgaattcataataaatggaaagaagcagacattatatatcatctggaacaattagaacatgaaaaatagtcgggagtttgtttcaaaattgttgggatgggagataagcgatttgtgtgcctgatgtgcaatcgacagcgtcccttgctgatgtggcaaaaatatgtaatgtggccttcactttgaacaaatatgcaccatatagccaagttaatggactaatatgctcaaatttcaagttctagtactaaaacacgcccacctgacaagttcttgcaccatgagtgcaatttactctttctaaaaggaactatcaaatgaatgaaacatatcaaaatatgccttttatttttgttgaaagaaataatttgatatcggtgcagcctcttagatttcccttagatcagcgtaagttcttgatatttacatttctgaaactgcagcacaccatttgagttgcatgatgactcatttgtactgaaagcaatgagttcttgtggagaagaacaaatcgacggtattcatgatctaatttcaaatggaggtgagagctcaagcatgccaaatatttataggcagcaagtgcagcaacctgcaagatcaactaatggtacagctagattgccaagctcaccccctattccaggaatactgaaagggcgagtgaagcacgagcattag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0152100, RefSeq:Os03g0152100