Os03g0156000

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0156000| Description = Alpha-expansin OsEXPA19| Version = NM_001055542.1 GI:115450812 GeneID:4331667| Length = 972 bp| Definition = Oryza ...")
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Gene Name

Os03g0156000

Description

Alpha-expansin OsEXPA19

Version

NM_001055542.1 GI:115450812 GeneID:4331667

Length

972 bp

Definition

Oryza sativa Japonica Group Os03g0156000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3004872..3005843

Sequence Coding Region

3004872..3004992,3005110..3005425,3005531..3005843

Expression

GEO Profiles:Os03g0156000

Genome Context

<gbrowseImage1> name=NC_008396:3004872..3005843 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3004872..3005843 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacattttcctgcagctgctcgccgttgttgcactctgcattgcaccggcgaggtcggactggctcccgggcaccgccacgttctacggcggcgccgacggctccggcaccatgggtggtgcgtgcgggtacgggaacctgtacgaccaggggtacggcatcaacaacgcagcgctgagcacgccgctgttcaacgacggcgcgtcgtgcgggcagtgctacctcatcatctgcgactacagcaaggcgcccgactggtgcaagctcggcaaggcgatcaccgtgacgggcaccaactactgtccgcccaactatgacctcccatacggcggctggtgcaacgctacccgccctcacttcgacatgtcccaacctgcctgggagaacattggcatctacaacgccggcatcatccccatcctctaccaacaggtgaagtgctggaggtacgggggcgtgaggttcaccatcaacgggttcaactacttcgagctggtgctggtgaccaacatggccgggagcgggtcgatcgcgagcatgtcggtgaaggggtcatgcacggggtggatccagatgacgaggaattggggcgccaattggcagtgtctcgctggactggccggacaggcgctcagcttcaatgtcacctccaccggcggccagaccatcgtcttcgacgatgccgtgccggcggggtggtcgttcggccaaacattcagcacctaccaccaattcgactactaa</cdnaseq>

Protein Sequence

<aaseq>MGNIFLQLLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGAC GYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNY CPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTIN GFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVT STGGQTIVFDDAVPAGWSFGQTFSTYHQFDY</aaseq>

Gene Sequence

<dnaseqindica>1..121#239..554#660..972#atggggaacattttcctgcagctgctcgccgttgttgcactctgcattgcaccggcgaggtcggactggctcccgggcaccgccacgttctacggcggcgccgacggctccggcaccatgggtacgtatacgtcgtctactccacatacggcccaaatgtccgactcacgtacgactgaatttgatttatttgattgccatggattaaccggatgcatgtgcgtatgtgtgcatacaggtggtgcgtgcgggtacgggaacctgtacgaccaggggtacggcatcaacaacgcagcgctgagcacgccgctgttcaacgacggcgcgtcgtgcgggcagtgctacctcatcatctgcgactacagcaaggcgcccgactggtgcaagctcggcaaggcgatcaccgtgacgggcaccaactactgtccgcccaactatgacctcccatacggcggctggtgcaacgctacccgccctcacttcgacatgtcccaacctgcctgggagaacattggcatctacaacgccggcatcatccccatcctctaccaacagtaataagcacatttaccgacctgacatctcctgaatttgtatgtgtgaattctgaagcgaagcagtacgtgtgttgtgctaaaccgttatgctatgaattgcagggtgaagtgctggaggtacgggggcgtgaggttcaccatcaacgggttcaactacttcgagctggtgctggtgaccaacatggccgggagcgggtcgatcgcgagcatgtcggtgaaggggtcatgcacggggtggatccagatgacgaggaattggggcgccaattggcagtgtctcgctggactggccggacaggcgctcagcttcaatgtcacctccaccggcggccagaccatcgtcttcgacgatgccgtgccggcggggtggtcgttcggccaaacattcagcacctaccaccaattcgactactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0156000, RefSeq:Os03g0156000