Os03g0156300

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0156300| Description = Alpha-expansin OsEXPA20| Version = NM_001055543.1 GI:115450814 GeneID:4331668| Length = 1485 bp| Definition = Oryza...")
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Gene Name

Os03g0156300

Description

Alpha-expansin OsEXPA20

Version

NM_001055543.1 GI:115450814 GeneID:4331668

Length

1485 bp

Definition

Oryza sativa Japonica Group Os03g0156300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3014741..3016225

Sequence Coding Region

3014741..3014861,3015518..3015806,3015913..3016225

Expression

GEO Profiles:Os03g0156300

Genome Context

<gbrowseImage1> name=NC_008396:3014741..3016225 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3014741..3016225 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaacattctcctgcagctgctcgccgttgttgcactctgcattgcaccggcgaggtcggactggctcccgggcaccgccacgttctacggcggcgccgacggctccggcaccatgggtggcgcgtgcgggtacggcaacctgtacgaccagcgctacggcatcaacaacgcagcgctgagcacgccgctgttcaacgacggcgcgtcgtgcgggcagtgctacctcatcatctgcgactacggcaaggcgcccgactggtgcaagctcggcaaggcgatcaccgtgacgggcaccaactacggcggctggtgcaacgcgacccgcccttacttcgacatgtcccagcctgcctgggagaacattggcatctacagcgctggcatcgtccccatcctctaccaacaggtgaagtgctggaggtatgggggagtgaggttcatcatcaacgggttcaactacttcgagctggtgctggtgaccaacatggccgggagcgggtcgatcgtgagcatgtcggtgaaggggtcatgcacggggtggatccagatgacgaggaattggggcgccaattggcagtgtctcgctggactggccggacaggcgctcagcttcaatgtcacctccaccggcggccagaccatcgtcttcgacgacgccgtgccggcggggtggtcgttcggccaaaccttcagcacctaccaccaattcgactactga</cdnaseq>

Protein Sequence

<aaseq>MGNILLQLLAVVALCIAPARSDWLPGTATFYGGADGSGTMGGAC GYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVL VTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVF DDAVPAGWSFGQTFSTYHQFDY</aaseq>

Gene Sequence

<dnaseqindica>1..121#778..1066#1173..1485#atggggaacattctcctgcagctgctcgccgttgttgcactctgcattgcaccggcgaggtcggactggctcccgggcaccgccacgttctacggcggcgccgacggctccggcaccatgggtacgtcgtcgtctgctccaccctctggaatagcattgtcaattatgattgacaaatgacaatgttgcatgcatgcatacgtgtactttctctattctaaaataaatcaaactaaggcgaaccttactccccagcacgcaaaataaagtagcgtttagcacatcattaattaagtattagctaaaataaatttaaaaatagattaatatgacttttgaaagtaactttcgtatacaaaatttttgcaaaatctataccgtttagtagcttgaaaaacgtgcgagcggaaaacgagagaggtgagttaggaaagtagagataagaactcagccctaatgtgggatgtaacatctaagctcctagtactaagggtgtgtttagttcacgccaaaattgaaagtttggttaaaattggaatgatgtgatggaaaagttggaagtttacgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaagagaaaatttgaaactaaacacgacgtaagatattattcaaatttgtagtattaagatatgtaacattttataataataatagattgatttattttgaaacgaaggaagtacgtcatatgcaacctgaacttgtgacagaatatttgggtgcatctgtacttgcaggtggcgcgtgcgggtacggcaacctgtacgaccagcgctacggcatcaacaacgcagcgctgagcacgccgctgttcaacgacggcgcgtcgtgcgggcagtgctacctcatcatctgcgactacggcaaggcgcccgactggtgcaagctcggcaaggcgatcaccgtgacgggcaccaactacggcggctggtgcaacgcgacccgcccttacttcgacatgtcccagcctgcctgggagaacattggcatctacagcgctggcatcgtccccatcctctaccaacagtaataagcattaaccaacctgacatcttctctgcatttctatatatatgtctgaactctgaaacgaatcaagtgtgtagtgctgtttgtattgaaaaatttgcagggtgaagtgctggaggtatgggggagtgaggttcatcatcaacgggttcaactacttcgagctggtgctggtgaccaacatggccgggagcgggtcgatcgtgagcatgtcggtgaaggggtcatgcacggggtggatccagatgacgaggaattggggcgccaattggcagtgtctcgctggactggccggacaggcgctcagcttcaatgtcacctccaccggcggccagaccatcgtcttcgacgacgccgtgccggcggggtggtcgttcggccaaaccttcagcacctaccaccaattcgactactga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0156300, RefSeq:Os03g0156300