Os03g0156500

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0156500| Description = Lupus La protein family protein| Version = NM_001055544.1 GI:115450816 GeneID:4331669| Length = 5569 bp| Definition...")
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Gene Name

Os03g0156500

Description

Lupus La protein family protein

Version

NM_001055544.1 GI:115450816 GeneID:4331669

Length

5569 bp

Definition

Oryza sativa Japonica Group Os03g0156500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3018100..3023668

Sequence Coding Region

3018398..3018685,3018786..3019302,3019384..3019537,3019625..3019715,3021105..3021176
,3022915..3023238

Expression

GEO Profiles:Os03g0156500

Genome Context

<gbrowseImage1> name=NC_008396:3018100..3023668 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3018100..3023668 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccaacgccgaccagcacgcggcggcgaacggtggtggggggacgacgccggctgcgaccggtagcccccctgccgggaagaaggcggcggccgctgcagcgtggaagaggccggggaacggggcggcggtgccggtcgtggtggcgcctgggagccccatcatggacgccgactcatggccggcgctgcccgggctggcgtctccgccgccgacgacgctgacgccgacgccgatgccgcccaaggcatcgcccaaggtggctcctctaccgccacccgctgaggcggtgatcccaccgatctccttggggaattccggcgctccggatgctaatcctgatcacgaagcaccggtgcggaatccgccggctaggcgtgccctggtgatgcctgtgggggatgggctggacaagcgtgcccctggctcagagccatccccagtctacacccctaatgccaggagcaatggaggcggtgatcaccaccagaatggtcgatatggttcccatccccatagccgaggtagtggctatggtggtggggggaacaggaggggcaatggtggaggtggaggtggaggtcgccgtggacaggagcaccatggtggttttgatgggcaacgccgtggcggtggccgcagggacggccatgggcctggacaccagcagcgcggccaccatccatcttacataagggctcctctggctgttgtgactgcggcgcctcctccaccaccaccatttgttaaccctgctactccacaaacaccaccttatggagctcccataggcttccctgagatagcacctcatgtctactattttacgtctcccctggaaggtgttcaagcactgccttttgtgcctcacccagcaagccctccagctatgttaattcctcaatttgatcctcttcgagcggagctgctgaagcagatagagtactactttagtgatgacaatttgtgcaaagacatattcttgaggcggcatatggatgaccagggttgggtgccattacccctgattgcaggatttaatcaggtaaaaaagctgactaataacgtgcagtttatcttggaaacagttctgcaatctaccgtggttgaagtacagggtgacaaattgcggaagcgtgaaagatgggagatctggttgcttccaaaacaaggttattctgctggaaattcttctggttcgctgtcccctgtgacatccaacattgattcactggcatctcagtttcaatctgttggacttgagggggcaggctaccatgcaagtcaaggaatgcccggtgaagctctccttactaggtcagcaacttcagttagtctaggttatcaggcaccccccttgggagggttatacagcaacgggagtggaccactttttgggcagaagtctgcaagaagtttactccggagcgataccttttga</cdnaseq>

Protein Sequence

<aaseq>MASNADQHAAANGGGGTTPAATGSPPAGKKAAAAAAWKRPGNGA AVPVVVAPGSPIMDADSWPALPGLASPPPTTLTPTPMPPKASPKVAPLPPPAEAVIPP ISLGNSGAPDANPDHEAPVRNPPARRALVMPVGDGLDKRAPGSEPSPVYTPNARSNGG GDHHQNGRYGSHPHSRGSGYGGGGNRRGNGGGGGGGRRGQEHHGGFDGQRRGGGRRDG HGPGHQQRGHHPSYIRAPLAVVTAAPPPPPPFVNPATPQTPPYGAPIGFPEIAPHVYY FTSPLEGVQALPFVPHPASPPAMLIPQFDPLRAELLKQIEYYFSDDNLCKDIFLRRHM DDQGWVPLPLIAGFNQVKKLTNNVQFILETVLQSTVVEVQGDKLRKRERWEIWLLPKQ GYSAGNSSGSLSPVTSNIDSLASQFQSVGLEGAGYHASQGMPGEALLTRSATSVSLGY QAPPLGGLYSNGSGPLFGQKSARSLLRSDTF</aaseq>

Gene Sequence

<dnaseqindica>299..586#687..1203#1285..1438#1526..1616#3006..3077#4816..5139#gcgtccatccgtggaagggaacggaaagggggaagaagagctgcagcgagcgacgagggcatcgccgcctccgccgccgccgcgcgcgacggtttatcccgtccccgatccgatcgtcgccggggctcctcctcctccaccctcgccgcgggcaatatttggaaccccccagggaagtatctctcaccgccgatcgcctctcatgccgtgctgagtggagcgcctaccgaatccctacccccacccgccgccgccgcagcagctcgtgccgtatcctgtttacagcggtttgtgggtgatggcttccaacgccgaccagcacgcggcggcgaacggtggtggggggacgacgccggctgcgaccggtagcccccctgccgggaagaaggcggcggccgctgcagcgtggaagaggccggggaacggggcggcggtgccggtcgtggtggcgcctgggagccccatcatggacgccgactcatggccggcgctgcccgggctggcgtctccgccgccgacgacgctgacgccgacgccgatgccgcccaaggcatcgcccaaggtggctcctctaccgccacccgctgtaagtgtttgatccagttgattgtagaataatagggggattgaaatttattgccgtttgatgggattgattgggttttcccgttggggaatcatctcaggaggcggtgatcccaccgatctccttggggaattccggcgctccggatgctaatcctgatcacgaagcaccggtgcggaatccgccggctaggcgtgccctggtgatgcctgtgggggatgggctggacaagcgtgcccctggctcagagccatccccagtctacacccctaatgccaggagcaatggaggcggtgatcaccaccagaatggtcgatatggttcccatccccatagccgaggtagtggctatggtggtggggggaacaggaggggcaatggtggaggtggaggtggaggtcgccgtggacaggagcaccatggtggttttgatgggcaacgccgtggcggtggccgcagggacggccatgggcctggacaccagcagcgcggccaccatccatcttacataagggctcctctggctgttgtgactgcggcgcctcctccaccaccaccatttgttaaccctgctactccacaaacaccaccttatggagctcccataggcttccctggtatgccatgcatgtggtttatgagatcatagagttgttctattgttatgtcaccttaatttgcttcgtttcaaatagcagagatagcacctcatgtctactattttacgtctcccctggaaggtgttcaagcactgccttttgtgcctcacccagcaagccctccagctatgttaattcctcaatttgatcctcttcgagcggagctgctgaagcagatagagtactactttaggtacttttttgtctacatttacgtgaaatatttgttccatatcattgccgaggtaaatttactgagccacttgttcaacttttgcagtgatgacaatttgtgcaaagacatattcttgaggcggcatatggatgaccagggttgggtgccattacccctgattgcaggatttaatcaggtgagtttgcaggttctacatgatgttttttttaactaaaaatattgtcaatgaacctttacttcgttgctattgttcagcagattaatgacaaatttaccaactgccttgtaaggttctgctcactgtcaccatcgagtgagggacatagaaaactttttttttcttattagtattagatatcttcttgcctggttgcctgattgtgtgagaaactgcatgcacatttagatattattcaaaacttctgataagtgataacttatatcctgtgtaattcactacataaatgacaacaaacatgcaattgtctctattttttaagctgaatacatacaattgctcatgcattgttaattgtgtcgacaaatatgatggaagagacctcaatctattactgttgtataggcatatttctttatggattttccgaatcatatccttcacagttagttagtttggtgagtaccatttaccattgcatcatgggaatgaggtttgtattcccctcaggttgctttaaccatgccaagactcttttttggggttatttcttcctctttcaactacatatttcctaactttggtcttgtattatgttctttataatgtttctgtgccttccgatgcactatgtacaaaagtcttataggtttgcatactgtatttatgctttttttttttgtcttggtctgttacttcttattttttgtgtgtgctggggagggggggggggtattctgcaacaataagactgaagcatccaaaatacaattcatttttctatatgaacaaactttctgcaccttggtaattaagcatttaagttccaagagaatgactacgtctgaggactgaatcatttcccatgaattgttacaagtgttaatgtttttctaaaagaacaaccaggagttataattgcactcaaatgtcagatatgttggctggtcataagcagggcaaagagagaaactagccactggaatgcaaaaagaactgtagaaaagagacaacaaaggtagaggctgactaaacagtgaaaaggttcttaaaagtgctaatgttgttgtaagacaattacacaataggaatgttttgtgatgcagatagttagaataatggaaataaagtgaatttgaagatgctctgagttgtttttgctttgcaccggcacatgggacattccacaatatggaatcatggacacatatttcacatgactatacatggatgattaaaaaaagagagagaaaacttattctatgccataacatcatgcatgtcctgccaaaaaatatatatcaatattcattggccaggaattaaaatagatattttgcttcttttacaactctgactgattctgacttatattgtttcgtgtaggtaaaaaagctgactaataacgtgcagtttatcttggaaacagttctgcaatctaccgtggttgaagtacaggtgatctttaattctcataatttacctttgaagtaatttcatattttgagtttcaaacagacttatctgccatatacaagtgctgtaatttataaatatgcaagtaatattcatgttctgctatgtgcggactgcggaatgtactgctggtttagagcatgtactataaggatttaggtgttgcctccaaaagtgccacataggattaggtgatgaggtgtagagagaggatgagccacccttcatgcaagggacaacctccgcacaatctccaagagaaaaagagagaatgagatagtgtgggagtgaaccaacacaaaaaaaaatgatgtttgtgtattagaggtaatatgttgtacatgttgcctcttaattaatggatagatgacatggctaaaattagaggtagtagccaactctactataagatttgttcttagtgagcagttttttttaagtatttaaacttgatttagtgagcagcttaccattacaaatcttctcttcactagatatttcagaaagggtaaacatgacattcaaatgggctgtaaatggcgtggcatgctgtataaaaggaacattctagggaaatatttttggtttctgatcttcaaactgacattatttagtttcagtttgtaagggatgctgtactttactgatgatctttagagcagcattatttagttccaatactttacattcaaaagcttgttcaccttttattacaaccaattgggtagctctttatgctatatctgcatgacatattagtttgcgtgtctacctaggtaactcggcctatatctgcatagcgtcttagcttgtatgcgcacctttggcgtaacgttagtagtaggaatattggagtactcagactgttgtgcatgcccaacttaagtccagttgcatccttgtagaatcttagtccaatcttgtgtgtacattggatctggatccacatgttgaaatgtgcgcacgacgaacattgccatggcgcaaaggaatgcaccattgatttttaaatagtatattttttagcaccctagatgatctcacatgccaggaagcaggccttctctattttttcttccttcttaacgcaggacttcaaaaatgaattgagagctgtttcattactaagttttacttgccaagttcctttggttaaaacttaatgtatatcacttacaggtacactcttaactgattagccactaggaaaaactgaatgtctctgaacgtaatgctagaacatattacgaggagaatcttatctagtgatagcaaacaagttgtcaataggtgtattcaataatgatcttaaggttttcctatagattggaattgtgatagcttgacaacactgttatttatcattctacttacccgcatattcacttaagttaaaaatatctaaatagtaaccaccaactcatctagaaatcactcatctatcctccttgattagaaatcactgtaataaacttctacagtagtagccttttcttttgtcaatcttctgaaacaatatgacttgaaggaaaatttcgtttagcctgtgacaccccaattgactccccaagacgttagaaacatcatgtacttttggtttcctatcatggcttcttgcttgaaatgagaatgacatgaatatgttttttttttaattctaattcacattttctccatacatctgagttctcgctgtgtttcttgcatacttactttacagggtgacaaattgcggaagcgtgaaagatgggagatctggttgcttccaaaacaaggttattctgctggaaattcttctggttcgctgtcccctgtgacatccaacattgattcactggcatctcagtttcaatctgttggacttgagggggcaggctaccatgcaagtcaaggaatgcccggtgaagctctccttactaggtcagcaacttcagttagtctaggttatcaggcaccccccttgggagggttatacagcaacgggagtggaccactttttgggcagaagtctgcaagaagtttactccggagcgataccttttgaggttttacacaagaaagattacaacggcatgccgagttttctctggttacggcacgcgtacctcatctactggggtgaggagtgaggactaaaatccagttgatttggaagaaaacaaccaaaaaaaggaaataaaacatacaaaaaagagagatagaaatacccaaaaaaatataaaaatataaaaaccaaaaaaatcgaaaaacttaaaaacaagaggaaaaaacatagtaggtagtattatgtgcaggacttatgtattttgtggttgtgctcttgctgggacgtgagtacgtgacattacctgttaagtactcgtttgattgttgctcttttgcagactgagttgttatggatgttgtcagtcggaagctgttaaagacgagacaaacttatttcaaaaaactgatgacattattatcagttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0156500, RefSeq:Os03g0156500