Os03g0157400

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0157400| Description = ABC transporter related domain containing protein| Version = NM_001055549.1 GI:115450826 GeneID:4331674| Length = 99...")
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Gene Name

Os03g0157400

Description

ABC transporter related domain containing protein

Version

NM_001055549.1 GI:115450826 GeneID:4331674

Length

9959 bp

Definition

Oryza sativa Japonica Group Os03g0157400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3054367..3064325

Sequence Coding Region

3054609..3054830,3054941..3055048,3059576..3059860,3060021..3060308,3060393..3060710
,3060781..3060964,3061053..3061208,3062943..3063169,3063283..3063353
,3063639..3064095

Expression

GEO Profiles:Os03g0157400

Genome Context

<gbrowseImage1> name=NC_008396:3054367..3064325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3054367..3064325 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgataatggagaagccgatgatggacacgggaggggggatgattgagcggaccaagtcggaccagctggcgccgccgccgccgccgtcgtcggcgcagtcgctgagcaggacggcgtcggcggagacggtgctgagcacggccgacgtgacgacgacgacgagcctgtcgcgcaagtccagcttcgggaagcgctcggcgtccggcggcgccggcgccggtgggaacagccacggctacagcagcagcaacaacaacaacagccacatccgcaagtcccgcagcgcgcagctgaagctcgaaatggaggacctcgtctccagcggcgccgccctcagccgcgcctccagcgccagcctcggcttctccttcaccttcaccggcttcacccctcctccccaggacaccatgtcctccgccgagctccatcccttcagcgacgacgacaacacgatggacatcgaggccgggacgccgcgcaagaagctgatgaccgagccgacgttgccgatatatctcaagtttgcggaggtgaagtacaaggtggcggtgaagggtacgccgagggagatcctgagcgggatatccgggtcggcggcgcccggcgaggtgctggcgctgatgggcccgtcggggagcggcaagacgacgctgctcagcatcctcggcgggagggtcgccggccccggcgacgtcgaaggctgcgtctcctacaacgacgagccatactgcaagtccctcaaccgcaggattggatttgtgactcaagatgatgttctttttactcatcttactgtaaaggagacattgacttatgcagcactgcttcgtctcccaagaacaatgacgaggcaagaaaaggaagaacgaacaatagacatcatatatgaacttggccttgaaaggtgccaggacacgatgattggtggatctttcgtccgtggggtttcagggggtgaaaggaaaagagtttgcattggaaatgagatcataataaatccatctttactctttctcgatgaaccaacatctggattggattcaactacagctctcaggataattcaacttctacatgatatagctgaggatgggaagacagtaataacaacaatccatcaaccatctagcagattatttcataagtttgacaagcttatcctcctgggaagaggaagtttgctctattttgggaaggcatctgaagccatgccctactttcagtccattgggtgcaccccgctcatcgcaatgaacccagcagaatttctactggatctcgccaacggaaacactactgatgtttctgttccttccgagttagatgacaaggtgcacatggaaaatcaaaacctgcaaactaataccaagaatgactacaagccatcagcacaagatgttcatgagtatcttgtagacgcctatgagaatcgagtggcatacaaggcgaagaagcagcttctagatccacttccaatcagtgacgatatgaagacaactataacatcatcaaagcgagaatggggcactagctggtggcagcaatattccatcctcttctgtagagggatcaaagaacggcgacatgattatttgagctggatgagaatcacccaggtcatagcaacatcagttatcttaggtctactatggtggcactctgatccctcgacaccaaaaggtctacaagatcaggccggcttactgtttttcatagctgtgttttggggtttctttcctgtgtttactgccatcttcacattcccacaagaaagggcaatgttgaacaaggagcgtgcagctgacatgtacaagctcagtgcatacttcttggccagaacgacaagtgatctgccactggaccttttccttccagtcatatttatggtgattgtctacttcatggcaggcctcaaagcaactgccgcacatttctttcttagcatgttgaccgtcttcctcagcatcattgctgctcagggattaggattggcaattggagctagcctcttggatatcaagaaggcaacaactctagcttcagttacagtcatgacattcatgctagcaggagggttctttgtaaagagagttccaccattcatatcctggctccgctacctgtcattcaactaccacacgtacaggctactgctgaaggtgcaatatcatcctgtcccggacattctgatcaatgccatacctcttgacaacggcgtgacagaagttgtagctctggtcgcgatgatcatcggctacagggttctagcgtacatgtctctgagaagaacgaagacttcagccagctag</cdnaseq>

Protein Sequence

<aaseq>MESIMEKPMMDTGGGMIERTKSDQLAPPPPPSSAQSLSRTASAE TVLSTADVTTTTSLSRKSSFGKRSASGGAGAGGNSHGYSSSNNNNSHIRKSRSAQLKL EMEDLVSSGAALSRASSASLGFSFTFTGFTPPPQDTMSSAELHPFSDDDNTMDIEAGT PRKKLMTEPTLPIYLKFAEVKYKVAVKGTPREILSGISGSAAPGEVLALMGPSGSGKT TLLSILGGRVAGPGDVEGCVSYNDEPYCKSLNRRIGFVTQDDVLFTHLTVKETLTYAA LLRLPRTMTRQEKEERTIDIIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIII NPSLLFLDEPTSGLDSTTALRIIQLLHDIAEDGKTVITTIHQPSSRLFHKFDKLILLG RGSLLYFGKASEAMPYFQSIGCTPLIAMNPAEFLLDLANGNTTDVSVPSELDDKVHME NQNLQTNTKNDYKPSAQDVHEYLVDAYENRVAYKAKKQLLDPLPISDDMKTTITSSKR EWGTSWWQQYSILFCRGIKERRHDYLSWMRITQVIATSVILGLLWWHSDPSTPKGLQD QAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYKLSAYFLARTTSDLPLDL FLPVIFMVIVYFMAGLKATAAHFFLSMLTVFLSIIAAQGLGLAIGASLLDIKKATTLA SVTVMTFMLAGGFFVKRVPPFISWLRYLSFNYHTYRLLLKVQYHPVPDILINAIPLDN GVTEVVALVAMIIGYRVLAYMSLRRTKTSAS</aaseq>

Gene Sequence

<dnaseqindica>9496..9717#9278..9385#4466..4750#4018..4305#3616..3933#3362..3545#3118..3273#1157..1383#973..1043#231..687#ggcgcgccccctgcccctccgctgcctcccccccacgtcgccctcgccacaatccacctcacacgcgtgacctccatcgctcgcttgccaaatgccttagctgcgtgtgttgccttcccatcactctgtgtctgtgtatataacggctcgtctcgtgtaaaagctactgctctaaatgtgcttgctaggaacgtgacggtgttagctaggtagtttgttcgtgttcgttcatggagtcgataatggagaagccgatgatggacacgggaggggggatgattgagcggaccaagtcggaccagctggcgccgccgccgccgccgtcgtcggcgcagtcgctgagcaggacggcgtcggcggagacggtgctgagcacggccgacgtgacgacgacgacgagcctgtcgcgcaagtccagcttcgggaagcgctcggcgtccggcggcgccggcgccggtgggaacagccacggctacagcagcagcaacaacaacaacagccacatccgcaagtcccgcagcgcgcagctgaagctcgaaatggaggacctcgtctccagcggcgccgccctcagccgcgcctccagcgccagcctcggcttctccttcaccttcaccggcttcacccctcctccccaggacaccatgtcctccgccgagctccatcccttcagcgacgacgacaacagtatgcatccaatcactcctactgatcctaactgcatgcacatatggttatcgtacctttcgtagttatatttgtcatttttattacaacttataaaaattgaatttaaatttgtattttcgtggagtgatatattttatattaatttatgttactaatttttttaatttttttatagatatttagataatatagacgaaacgagggatatccgatctccttgagagatgaaatcacttccctaatatatatattctcattctctgtgccgctgtgcgtatgcagcgatggacatcgaggccgggacgccgcgcaagaagctgatgaccgagccgacgttgccgatatatctcaaggtaaatcgaccaaacgcatcgattatcccaagctccatggacgtacgccgccggcatgcgagaggttcagtgagctaatgctacatgagatgagactcgtttcgttcgtgcagtttgcggaggtgaagtacaaggtggcggtgaagggtacgccgagggagatcctgagcgggatatccgggtcggcggcgcccggcgaggtgctggcgctgatgggcccgtcggggagcggcaagacgacgctgctcagcatcctcggcgggagggtcgccggccccggcgacgtcgaaggctgcgtctcctacaacgacgagccatactgcaagtccctcaaccgcaggtaacacaacacaaaggaaggttcatcctctgacctctctgatcgcgtgcaatagatgcatgcagcgtcttaattaattattaattagttactccgtagcatgcacttgttcgtacacgatgtggcatcaccaattaattcctccggggccaggattattaattaatcaattaactaaattatttacaattagttatttgcgagccctaaaacctcaccgtttgctcatattcccaataagttaaaacggtttattagaaaataaaagttaatttgtagataatttttttatatatattcttagtgatttaaaagctaatgctgaaaaagaaaatatgttgaaaatatcttaaaattaacttcaaaattaatttttaaaatttaaattttggtttttttctttgggttattagcccaactgatggagccactaattgtaaatttctcattggtcgatgggtcactagctggggaacgaaagtgataagaatgagatgagatcgatcagctgttgcttgcagctacagagcacagcatagtaccatactgcatgcataggctgtgtggctggctataataaaggagagattagcaaggcaaggctcacggttatctcgctaaatctggctacctgttcatcgctgctacagttgtactgtctactgtcttcttcttccagcttccctctgccttggccgcaggggaactgcacatctgacgtgccgattctggcacgtaccgcgcacctgtcattattattctgtctaatgggcggcgccagaattgggccttgccgacgccgagcagccgacatgttctttttgggccgaattgggtggcccaatcgtgcgtcccggcgcatgggccgtgatgcctttggtcggctcttgcccgcggctatggctgtcgcctggtcacctgtgtctctcacggtctcgtctgcttgggcgcgccgcgcggcgacgcctcgtcgtcgtcgtcgtctcatggaaactccggcggcttgtgcggcggagcacggtcgggacgttcagggagtcgcctgcccgttgttctcgatcgcatgtctgcgccatgtcgtagcgtgctctggtgaggtgaggttccagtcatgcccttcctgccgataagctgttcgatgtatctcctgaccgatgctggaggtagtattagtaagcacacgtttcacgtcagtgaacacttgcatcacctgaggcctacagtagtctgagcttacaggtctccggtgtttagaggtccacttcgtcttgaacaccactgcaccagggtctctgtcccgcaattcctttggatgcttgtctttgtcaccaggattgcctctgcttctgcctctacctccacctgttcttctgcttagtcctttaaattgtgttggtgtaacctagctactaagttggttagacactcaaacataacaccactttagtagaatcgccaattaaaaaccatgtagtattctcctttttccgcttccaattcggcaaacaattcgaactgagagatatcctggttccttattgttagcaattttcgcactgtctgactagactaactaccctcaacattctacaaggttttatatgcaaaacatctgcttgtaccaatggtttggatcgtcagagcaccaaagttgagcttgagcctgtatggacaaactaattcaaagtttgtccaagagtatagtgaatgattggttttatactcgtttttcaggattggatttgtgactcaagatgatgttctttttactcatcttactgtaaaggagacattgacttatgcagcactgcttcgtctcccaagaacaatgacgaggcaagaaaaggaagaacgaacaatagacatcatatatgaacttggccttgaaaggtagtttgaaaaacgctccacttcctgtatggtagcatgcacctattcttagaaattagcttaattaattatctgatgatgtttgaaggtgccaggacacgatgattggtggatctttcgtccgtggggtttcagggggtgaaaggaaaagagtttgcattggaaatgagatcataataaatccatctttactctttctcgatgaaccaacatctggattggattcaactacagctctcaggataattcaacttctacatgatatagctgaggtgacatgagagtattacacattagctggcaactagttcaattcatctttaaccttttgacatgttgcaggatgggaagacagtaataacaacaatccatcaaccatctagcagattatttcataagtttgacaagcttatcctcctgggaagaggaagtttgctctattttgggaaggcatctgaagccatgccctactttcagtccattgggtgcaccccgctcatcgcaatgaacccagcagaatttctactggatctcgccaacggaaacactactgatgtttctgttccttccgagttagatgacaaggtgcacatggaaaatcaaaacctgcaaactaataccaagaatgactacaagccatcagcacaagatgttcatgaggtgacgacatgaaagcaatgtgctggtgttatgagttgagggttggtttagatgtctgaataatttatatgtgatttcatgcagtatcttgtagacgcctatgagaatcgagtggcatacaaggcgaagaagcagcttctagatccacttccaatcagtgacgatatgaagacaactataacatcatcaaagcgagaatggggcactagctggtggcagcaatattccatcctcttctgtagagggatcaaagaacggcgacatgattatttgagctggatgagaatcacccaggtcatagcaacatcagttatcttaggtctactatggtggcactctgatccctcgacaccaaaaggtctacaagatcaggtacatagatagcaataatcatgcgattcattttacgccaaagaaaatgtgattcatgtgaaatggcggagttggttactcagagagcttattaatgatatgtcagctcgggtatgcaggaagattagtatcataacacaattttatcttgcgtatgcaggccggcttactgtttttcatagctgtgttttggggtttctttcctgtgtttactgccatcttcacattcccacaagaaagggcaatgttgaacaaggagcgtgcagctgacatgtacaagctcagtgcatacttcttggccagaacgacaagtgatctgccactggaccttttccttccagtcatatttatggtgattgtctacttcatggcaggcctcaaagcaactgccgcacatttctttcttagcatgttgaccgtcttcctcagcatcattgctgctcaggtacatttcaagctaatttcgtggtataattccattgacatctcctatttttagagcaagtttggttcgaggccaaaacaagccttaccaaaatttggccaaaggcacaatttggcatggccaatatttggaaaggctaaattgtgtttggttaaaggccaaaactaaccttgccaatttttggctaaaccaggtttggtttggtgccatcaaatggctatgccatcaaatgccatcctattgtggatggtcgtattgcaaaagtttgaaaatagcatccaaaaaaatacaaactttactatgtaagtgaaagcctaggtatgtacttgcatttgtggccaaaatggctacgttgctgtgtgttgaaagccttgagatacaatatgatagaaaacagaattgaaagctgcatagtagtgtagccatagcacattatatattacagcattcgggttggcattaatccctacttcatatgtgtcacaccacaagtacctactacatagcagtgacatatatacatcacgagggtttgcactgtccctactagataccccacactaccatcccctgcatgatagtgccagcatacatcacatatatatagcatcatgggttttatcaaaatacattgctccctaaccaaaatgtcaccacctgacacatgattcacatagtgcacccattgccaccattgcaagcacatttgcgctcaaggtaatctataacccaagcttggaaacttgcatcacttgcaactcgcagatacgaacgaaagatttcttgttcaggcttggcaagaaaggttgcaagttcaattttgtcacttgctgggatggtgagatcttctatgcgcctccaaatacttgcattaggatctcctacaatggattgttcaactgatgcaagtttgttagcaagcttaaggatactacctgccagctcatcttgttcttcttctttgtggcttgttttatgcttcagagtcttcttggtaggtgatttcacagatctacgcttatgccctgaataagtgccatcagtagtaggactattgcgagctatcgtgtcagaatcatggccaccatcttccaatgcaaatatgtattcttccaactccttgatgctaccactgccatcactatcactgctaccatttgcattgaactggtcaattgctagtgaaccatcagcttttgaacaaccaacaaataattcttcaaagaggtgaaagaatttgataggcttagtcaagtagttatatttagttgtctgccatgagaagaaacatagttagaaataaacaaatttagcacattcttgtatgaattataactcagaaattattgcacaataatatagcttacaccaagtttgtttgaatccttctcagatgggtcaatgttaaatttgcatgatgctgcatcaaaaccatagccacttttccctaaagctacacaaatccaactccatttttccttgcatagccttaagtgcctgtggacttggcttttggtgactctaatcccaaacttgtcttttaaagctatagcacattgctggtggtgttgtttcttccacttgaaggtactaggtttgtctttgcggagctctatataccactcaagcatgaactgagtagcatcatcactccaactgatatacttctcacgagagccaccttcctcgctagtaccttctgtacgctttcccatactacatacagtgaaaaaattataagttaatattgcatatgaacagatgatagtcagttaatgaagtaataagatgattggaagaaacataaatatattaatatgataatgtctgatacaatagtattaatacaacatacaatcctcacaactattacaaaatataatatcattaatagtccatgggactagtaattcattcactagtcaaaacatcatgaacatccgcattgtgtctgtcattccacatctgctgagcgatgttatcacgcttggctgcccactcacgtacatcatccccttggtcagagacacggttgctgctccttggtaggcgagcgtaccacgtcttctcatcgttgacaaattcatcagacccattctcaagtatccaattatgaagagcacaacaagcaataaccaccattgattgggctttcagtggtatgaatggcttattcataagaatcttgaaacgattcttcaaagcaccaaaagctcgttcaatcgtagtccgaagtgaagaatgacgatagttgaaaagctctttagggcattttgggccttgaggtccatgtggcccttgagggccacggaactcttttaggtggtaccgaacacgacgataagacggcaatatacccggcctagcagcatacccagcatcagccaaaaagaacttccctacaaacatgtcatagagcctaacgtcaacttatagcaaggctaatcatgaattctttgaaatgtttaattaccttcaagtattttaaggccatttggtcgagacagtgcatcttgcaacacaagggaatcatgagctgacccctcccaacctgctaggatatatatgaacctaaggtcaaagtcaacagcagctaatacattctgtgtggggtatggtttgcggcctctaaacctatccaccttcttggctggcacacttgccctgatgtgtgtaccatctagtgctcctatacagtcctatgtacatatcaaagtgaaacattagagttaaaataaacaaaatgtattgtaatatgcattgttatggcttggtgtttagaattaccttgaaatatggataaaatttgtttttcttgctggtgatcttactatgtgtattggtagacctgatgtaaatgagttctcgagctatctcgcacatggctcgcagcacaatacgaaaatacctactcacagtctcaccggatcgccaaaatgagaatccaacacatgaaacagaatggtgttgtccaacctttttcagaaacattgccacttgctcctctactgaaacatgaaaggtgtcaactagtagtcccttgttcctaagacgagcacaaagcttgtagaatactgcacgggacattcttaattgttgagtgcacgtcctatctgaaatgttgatcagcctgattagttcacttgttctccatacatccctgtggactaggggcccatattttacccctttgcgactactcctcctacgatatttgttcctcaaccatatgatgatcaaaagacaaagtaccactacagccttcttcgttagcaagaagtgatgcatatattgttgtcgagtgttctccatctggatgagattacatacgcagcttcaaattacttaaggaaatgtgtcggttcagtgaaaaacaaattaatttactgaataaatattgtgcccagccaacatgtagatttgtcgactaaaaataacattactgaggtgtaaatggacacctgtatatttttttgagcaaagaaatcaacactaagacagtaagatttattcaacctactgttttttattgctactagttaagatggtaatggcagactataaataactacattagtagcacaaatgaacaagcattgtacggatggagcatcagttgattaccttttcctgtagcaatcgatggtgtttttcacagcaactgagcacgccggagtcagtacagctactgctggaatcacaacacacgtactcgtcctgttcttctcctgagcagtcactcccctttcaagtttcaactcgcccccatccctcctagatgtagccccaaatctctaccccatttgagctattatttgtttcggttggtttagaagatgagtgtgtatgaccagatgaggatcttcttgggttttcttggtcaagatttggaggagatgtggttattggatggagaagatgaagggcgtcaaaaaacagaggacaaatgggaactgggaactctagagcttatcttcttatatttttgtgtgcagcgtagaatacatatggtcgatgtgtggccgcgcgcgcgggagttcaaatttcacgcccgcgattcggctcctgtcgacggcgtggccgattctttctcctcaggctggccgatatttggatccaaaccaaacttttgtttgtactgtttacttgacccataaattggtaagcccaacataggccatgaaccaaactggcccttaatcttttctaaaggaggaaacctatataagaaatgaattatagcattttttatttttctaaaagtttattctgttagttgaacttgtactgtctatatacacaccaattacatgagaaaaagaatgtatgatgaacatcaaaactatctaaatagatggtgagatgggaacaaaatccaaggaattttcccatgaagttgtagtcatcacctgtgtttattcataagttagggaacattttggttgatccatcatatatcttagatatttcaaaaggatattagcagtgattagaaatctgttactcaagaaaaaagtaatcatgcagggattaggattggcaattggagctagcctcttggatatcaagaaggcaacaactctagcttcagttacagtcatgacattcatgctagcaggagggttctttgtaaaggtgagagcaagcacttccctgtgttactgatgcaatgctgaagaacatactgaatgaacaagtctttactccgtcttacgcattgccctcttctccatcatgatatgcagagagttccaccattcatatcctggctccgctacctgtcattcaactaccacacgtacaggctactgctgaaggtgcaatatcatcctgtcccggacattctgatcaatgccatacctcttgacaacggcgtgacagaagttgtagctctggtcgcgatgatcatcggctacagggttctagcgtacatgtctctgagaagaacgaagacttcagccagctagcgaatcggtcgtcgagtgcactaacaggagtctggatttctgctaggatggcacccgttcttaccagatgattggacatagagaagtttgtaactatatatatataaattgcgccacgaaaagatagatcttttttaactgttctgtctttctgctacttgttcagagcgcgacatatctgttcctacttgcctcataggtcaattgtgggcaacaataacgagtataagtcccaaaatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0157400, RefSeq:Os03g0157400