Os03g0157700

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0157700| Description = Protein of unknown function DUF639 family protein| Version = NM_001055551.1 GI:115450830 GeneID:4331676| Length = 41...")
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Gene Name

Os03g0157700

Description

Protein of unknown function DUF639 family protein

Version

NM_001055551.1 GI:115450830 GeneID:4331676

Length

4146 bp

Definition

Oryza sativa Japonica Group Os03g0157700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3076301..3080446

Sequence Coding Region

3076389..3076495,3077052..3077286,3077375..3077482,3077558..3077727,3078156..3078289
,3078405..3078576,3078709..3079261,3079385..3079497,3079600..3079842
,3079949..3080201

Expression

GEO Profiles:Os03g0157700

Genome Context

<gbrowseImage1> name=NC_008396:3076301..3080446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3076301..3080446 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgcggcggcgggcggcggcggcgagccttcgccggcgccgggagtgggcggccggaagcacctctcctccatcgccaaccacgtgctccgccaatgctccctgacattggacagaagtgttgatgaattagttgcagactttgagctcggtttgaagactgctgcggtggataactattcaagaagacttgtcgagttctgtatccttcaggcgctgcaagttgttacatctgttgatctaggagacaagatccatgatggatcgcttagtcggttcacatttgatatgatgctggcttgggagacacccactccttcagatcaacaagttaccatggagagcatagctaaagaaagagaggataagaaggagccgctcggagcaaatgaagctgtcatgggcgatgagacctcactgttctattcagatatcatgcctcttctcgtgaatgaagaaccaacagttggagaagatgcatatgtgtggtttggatctgtatttcctttggcgtgcgatgttatcaatgctcgattcacctttgaagccctgactgctacaaccgctaataggcttcattatcctgcttacgacaaattcctgaaagaaatggacaagtcttccgaattcttgcagaaggtgtcaactccaaccggaactgaacttgctgaagatgaattcatcttgcacatcgagggaacagcaggaacacaaagggtggtgcggcacattggaaccactagttggccaggcaggctgactctgacaaacaaggcattgtattttgaggcttctgggaaaatttcatacgaacctgctttcaaagtcgaacttacaggcagtgaaataggaaaacaagttaaaactacttcaactggtccttttggtgcaccattgtttgacaaaggcatcgaatttgaactaccagaacctttggttttggagtttcctgagatgaccagctcaacaaggcgcaatatgtggcttaccctgataagggaagtaatattccttcaccgattcatatcaatgtacagcatagactcccccattcacaaatgggaggtgcattcgagaatcatattgggggtgataaggcttcatgctgcaagagagatgctaaggatgtcgccaccgcctccttctagcttcctagtattctcgctttacgatgagcttcctaaaggtgattttgtgcttgaacaactagcaaataatctgaaagagacgtcaacgataactccgctcagtgcatcccatgtgttcaagggtttgagcaagtcgcatcgggtagctttaagtgcggagatagcaaaagagcatgacaaggactcaaatagccatgaacagcccttggcatcacttgaaaacactatcggtcaagtaagagacgaggctcgggaagtcaccgtcgctaacgttgctatcgaaggaatgaaggaggaaggtatcactgatagccttcttgtactggtggggttagtaagccccatgagcaaattgtttccagtgatccaaaagataatctcatgggagaaaccacttgtgactatcagtgtccttgccatgatggtgttaaccatatacagagagtgggtcggttttgcgttagcggcatccttgatactggcagcaggattcatggtttgggctagacaaagaaaaatcggtgcactatgctcagaggtgatcatcgacacttcatcggacaagacgacgatggaaagcctagtggaagcacagcaaagcctgaaaagagtgcacgagtacatcaagacagcaaatgtcgtgatcctccgagtatcgtcgatcgcgttagcgaggtcaccaaagtgtggaactctggataattttctgagtttgcagcatacagaaacggtgatatggatgctgacagggttggcgctggcgctggccgtgatcccgttcaaatacgtcctgatcggggtgatggccggcggcttcatgtcgaacacgaggatcgcgagagccatgtcgaacccgcagggaagccggcggtggagggagtggtgggagagcatacctgccgtcccagttcgggcggttgacgggggtggtctgtga</cdnaseq>

Protein Sequence

<aaseq>MDAAAGGGGEPSPAPGVGGRKHLSSIANHVLRQCSLTLDRSVDE LVADFELGLKTAAVDNYSRRLVEFCILQALQVVTSVDLGDKIHDGSLSRFTFDMMLAW ETPTPSDQQVTMESIAKEREDKKEPLGANEAVMGDETSLFYSDIMPLLVNEEPTVGED AYVWFGSVFPLACDVINARFTFEALTATTANRLHYPAYDKFLKEMDKSSEFLQKVSTP TGTELAEDEFILHIEGTAGTQRVVRHIGTTSWPGRLTLTNKALYFEASGKISYEPAFK VELTGSEIGKQVKTTSTGPFGAPLFDKGIEFELPEPLVLEFPEMTSSTRRNMWLTLIR EVIFLHRFISMYSIDSPIHKWEVHSRIILGVIRLHAAREMLRMSPPPPSSFLVFSLYD ELPKGDFVLEQLANNLKETSTITPLSASHVFKGLSKSHRVALSAEIAKEHDKDSNSHE QPLASLENTIGQVRDEAREVTVANVAIEGMKEEGITDSLLVLVGLVSPMSKLFPVIQK IISWEKPLVTISVLAMMVLTIYREWVGFALAASLILAAGFMVWARQRKIGALCSEVII DTSSDKTTMESLVEAQQSLKRVHEYIKTANVVILRVSSIALARSPKCGTLDNFLSLQH TETVIWMLTGLALALAVIPFKYVLIGVMAGGFMSNTRIARAMSNPQGSRRWREWWESI PAVPVRAVDGGGL</aaseq>

Gene Sequence

<dnaseqindica>89..195#752..986#1075..1182#1258..1427#1856..1989#2105..2276#2409..2961#3085..3197#3300..3542#3649..3901#acgccccgtccactcttgtccacgctgcgccgcgcagtgtcgcgcacaccccaaaaccccaaccaaccaaacaacccgacccgcggccatggatgcggcggcgggcggcggcggcgagccttcgccggcgccgggagtgggcggccggaagcacctctcctccatcgccaaccacgtgctccgccaatgctccctgtgcgtactttctctaatcctaaatcctaatcaaaccctgttgatggttgatttctccatcgtgtagaaactgtgttgttgttgttgttgttgttgttgttgttgttgtgtgtgtagaaactgttgctatcaattcgaaagaaactggcagtgttttccttgtagcagactcatgtgctttgatcttgtacgaacagaacatattggtatgaagcttcactacttgaaatgaagccggattacatgtttgggcattttatttgaccgcacaaactgcttccaaattaaacctctagcgcgtcagttattcattagtaactataccctgtatttgctaaacgtctctagttctctgatccatatgtccaaaacaatctgaatactataatttctaaccatgtcactgtaaccatgtcctgataccattagtaatatattatagcaattattctattcggtgcatgattcatacgtaatccttatagctcgtcgggagtcaggactcaggactagaaatggcaagagtaactaatacggggtcatggcttaattacaggacattggacagaagtgttgatgaattagttgcagactttgagctcggtttgaagactgctgcggtggataactattcaagaagacttgtcgagttctgtatccttcaggcgctgcaagttgttacatctgttgatctaggagacaagatccatgatggatcgcttagtcggttcacatttgatatgatgctggcttgggagacacccactccttcagatcaacaagttaccatggtttgtgatttttttatatttgtgtgaaattgtgtgtttgtgttcttctgaaatctgatctaaactgaccaatatggtgacattacaggagagcatagctaaagaaagagaggataagaaggagccgctcggagcaaatgaagctgtcatgggcgatgagacctcactgttctattcagatatcatgcctcttctcgtatgttaacacatagctgattaaattcctttccgtaaaatttcttcaagctattcatcggtaatgatgtttcaggtgaatgaagaaccaacagttggagaagatgcatatgtgtggtttggatctgtatttcctttggcgtgcgatgttatcaatgctcgattcacctttgaagccctgactgctacaaccgctaataggcttcattatcctgcttacgacaaattcctgaaagaaatggacaagtatgcaaccacttcacagttagatcttttttgcaaacataagcaacattgcatttcctctgttttttaatggataactccattgacttttgatgtgatatttgactattcgtcttattcaaaacagtagtgcaaatatgcaaaaaaatttaagtcaaccttaaaagtttttaatgataaaacaaatcataacaaaataaacgatactgatataatatttttgaataagacaaatagtcaaatggaatgccaaaagtcaacactttcatacctccctgctagatgtcgttcttcttctttttttttaacaaactggtagaactgcaaattatactgataaagcatgagaaaatgatacaaaatatagaacactgaccaccagtccaccacatcctgatggatgccatgtgaaattgacttttttttaggtcttccgaattcttgcagaaggtgtcaactccaaccggaactgaacttgctgaagatgaattcatcttgcacatcgagggaacagcaggaacacaaagggtggtgcggcacattggaaccactagttggccaggtcatcaatctgatcaagagttatattatttctggtttcttcaggtcttagcattttacgttgatgctttggtaacattttcttatgaatgctacattggttgtatactatacaggcaggctgactctgacaaacaaggcattgtattttgaggcttctgggaaaatttcatacgaacctgctttcaaagtcgaacttacaggcagtgaaataggaaaacaagttaaaactacttcaactggtccttttggtgcaccattgtttgacaaaggcatcgaatttgaactgtgagttccctcttgcatttcttatttttgtgttcatatggacaacctacacggatcaattctttttgttattaaaattatcactttgccccttttgcaaagaatatcgacagtaaccattcatctatgcagaccagaacctttggttttggagtttcctgagatgaccagctcaacaaggcgcaatatgtggcttaccctgataagggaagtaatattccttcaccgattcatatcaatgtacagcatagactcccccattcacaaatgggaggtgcattcgagaatcatattgggggtgataaggcttcatgctgcaagagagatgctaaggatgtcgccaccgcctccttctagcttcctagtattctcgctttacgatgagcttcctaaaggtgattttgtgcttgaacaactagcaaataatctgaaagagacgtcaacgataactccgctcagtgcatcccatgtgttcaagggtttgagcaagtcgcatcgggtagctttaagtgcggagatagcaaaagagcatgacaaggactcaaatagccatgaacagcccttggcatcacttgaaaacactatcggtcaagtaagagacgaggctcgggaagtcaccgtcgctaacgttgctatcgaaggaatgaaggaggaaggtatcactgatagccttcttgtactggtggtatgtacatttcttttatattctctttggtattttatctgctcaaatcatttttatttaagccggattgatttaatcaaacttccattcaacggttctaagttctaactgttttttatgcaggggttagtaagccccatgagcaaattgtttccagtgatccaaaagataatctcatgggagaaaccacttgtgactatcagtgtccttgccatgatggtgttaaccatatacaggttagatttatacaccgcatttaatttcaacatacattttactcttggaaacgatcagggaacatgagatgcaaggtccctttttttttcaacatgatgcagagagtgggtcggttttgcgttagcggcatccttgatactggcagcaggattcatggtttgggctagacaaagaaaaatcggtgcactatgctcagaggtgatcatcgacacttcatcggacaagacgacgatggaaagcctagtggaagcacagcaaagcctgaaaagagtgcacgagtacatcaagacagcaaatgtcgtgatcctccgagtatcgtcgatcgcgttagcgaggtcaccaaaggtatcaatatcatcagagttcatcacacacgttctccgatcaccgaatcgttccaccgttgcgattcatttccatgtcatgttaacgcgttccttcatcatcatggtgtggaactctggataattttctgagtttgcagcatacagaaacggtgatatggatgctgacagggttggcgctggcgctggccgtgatcccgttcaaatacgtcctgatcggggtgatggccggcggcttcatgtcgaacacgaggatcgcgagagccatgtcgaacccgcagggaagccggcggtggagggagtggtgggagagcatacctgccgtcccagttcgggcggttgacgggggtggtctgtgaagtgttcgacgaaatgccggcagaaaaatcctcggtattgttcagctataagcttaagtgttcatgtatgttttttgctcagagatgtgccatactgccatcatctttatcacctgtcagctggtgtataccagaaaagaaaaatggcagagcacttaacacggaacactttgttggatgtactaacggttaaataactgtcaatgtgtgttgataaataaaggaatacgtcatatattcaatat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0157700, RefSeq:Os03g0157700