Os03g0158200

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0158200| Description = Helicase, C-terminal domain containing protein| Version = NM_001055555.2 GI:297600361 GeneID:4331680| Length = 4229 ...")
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Gene Name

Os03g0158200

Description

Helicase, C-terminal domain containing protein

Version

NM_001055555.2 GI:297600361 GeneID:4331680

Length

4229 bp

Definition

Oryza sativa Japonica Group Os03g0158200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3094371..3098599

Sequence Coding Region

3097323..3097437,3097994..3098079,3098156..3098221

Expression

GEO Profiles:Os03g0158200

Genome Context

<gbrowseImage1> name=NC_008396:3094371..3098599 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3094371..3098599 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaggttaacctcgtcatcaattatgacatgccaatcaagtttggcacaagagatgaacctgattatgaagtgtacctgcacagaattggcagagctggtcgctttggccgaaaaggagctgttttcaacttgctatgcggcgaaacagataacactgtgatgagaaagattgagacctacttccagcacaatgttcctgaggttcgtaattggcaaagcgaggaagattttgaaagagctctgaaggatgccggcttggttgagtaa</cdnaseq>

Protein Sequence

<aaseq>KVNLVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNL LCGETDNTVMRKIETYFQHNVPEVRNWQSEEDFERALKDAGLVE</aaseq>

Gene Sequence

<dnaseqindica>2953..3067#3624..3709#3786..3851#aagcatccgtctccccccttctcgattgttctcgatctgcggcggcggcggcggcgatggccgacggcgggaagcccccgacgccggagaagaagtcgtgggccgacgtagaggaggaggaggaggccaaggcgaaggcggccgcggcggcggaggcggcctcctcgtcttcgtcgaacgagccggcggtggacgcgcaggcgaagcagattgaggcgctgtctctctccgtgccggaggagcatggcggcagcggcggcggcggggacgaccagggcccgcctctcctcgacgactcggatgagtcccaaatccaagccgtaagttccgcgtcggcgctagtgctgggtggccaatctcggtggagtcgggagctgctttctagggtagtttggttgaccggccgattgatttcgaggtgttcctgctcaggtgacctcgggcggcacggtgtacgagtcggcggcggccttcgaggatctgaagctgacgccggagctgctcaaggggctccacgacgagatggggttcagccggccgagtaagatccaggcggtgaccctccccatgatcctcacgccgccatacaaggacctgatcgcgcaggcgcacaacggctccgggaagaccacctgcttcgtcctcggcatgctcagccgcgtcgaccctaaccggaaggtcacgcaggccatctgcatctgccccaccagggagcttgcccagcaggttgattgagcacacatacttctattatgtgctagtatgtggatttttttcttttcttgttatggatgtgcacactgtaatgtactctgtttgttttattgtgatttgcagaataaatcggtgcttatgagaatggggaagtttactggcattacctgtgcatgtgcgatcccaccggctcagaaagattatgtgccgatcgctaaaatgccaaagattactgaccaggtggtgatcggcacttctgggacacttatgaagtggattaatcataagaagatcttgacaaatgatatcaagatacttgtgtttgatgaggcagaccatatgcttgccgaggtatggatgagttctattgctgttcctctatccaaaacttgtgtatgcccattgcccaatgttgttttctattatttattttgttattattaggagaacgcctcgtgtttagttattagggacatttgggttagatattaatcttatggaaagagataattgattattgcaatttctaagctgtataggaattgggaacaatgaagcaaaaactgccataagctcgatttgttgtaagatttttttttttgacttaacaagaataatggtggcttcatgatgattgattttcttactcgaagtggcataccaaagattatctatggcctgtatacacagtacgtggtgtttccattgatattacagatcgggtctggttgggatgtaaaaaggcttaatgtttttttcaactactatatttgccactggtttgtgcagcattgcattatattcattattaagaaaaatgaaaaaaataataatgtattggtccattgttgctacagtatggttctgattcgaacggaaaattgcttcatgtttttcagtagatcaaatgatattagcctttcctaatagaaaaatattttggtatttgcatatgtattatctagattagaagagattcattcatatggttatgttttacatttggtaagacataatccctcacatgactaaacatttgtttaaaattgatgttgctcgtatgtttcatacttcatatctgcttatgcactcgatgagtttatgtattatgagttgaatagctttattttcacgcaatctaacttcacattataaatttcataaagtccaattccttataatggtgaatgcattctcgcaggatggcttcaggagtgattctgaaaggattatgagggatatacaaagaagcgctggtggctgtcaggtaacatttttctggtcacttttaacttcctttgcttgagtaggtccgtcacatgaaacagcttgaatgctccttatagaaggcgatctggatacagtttgaaatcagatatgaggttaatatgtccattctgtgttaagaggatgttttaggagaagcattttcctatagtctgcaagtatacatgtaaatatgcaattgcttattcaagaactccaaccaatgcttatgatgtaattggagaactcctttgcttgcttgcaagtagtggaaagagggtctaattttaaattttttggccattgatgatttttttttttgaccaagggcagccattgatgattttatctggtttgttcagcaattttgcaagatcattcagatgatcccaaatataccttttgagttttaaactagtcttttccatgtcatgtgatcatgtgtggagttgattgtccaatgtgtggagttgttatttattatttgaactgatggctgtcaggtgcttctcttttctgcgacattcaatgagagagttaaagattttgttacaagggtcattaaggatgggaatcaaatatttgtgaagaaggaagagcttactttggaaaaagtcaagcaatataaagttcaagtccctgatgaaagggcaaaaatagcagtcataaaggacaagatttttgagtttggacaaaaagttggacaggttatcatttttgttagaacaaagcaaagtactaaggatgtccacaatgctttgacattagaggactatgtatgctcctcgattcaaggatcccttgaccaatcagagagggaaaagataatacaggaattcaaaaatgggtacaccaaggttcttatatcaactgatgttcttgctcgaggtttcgaccaagcacaggtactatttgtgtttgttgactttatacttgagcaagtgtaaatcttttctaacattcttcctttgaaaggttaacctcgtcatcaattatgacatgccaatcaagtttggcacaagagatgaacctgattatgaagtgtacctgcacagaattggcagagctggtcgctttggccgaaaaggtgaaattatttctttggttctcttttgtccaaaaaggaaaaaaaaatgtcgtggttataattcaatgtttagtaagtcttcgattaataaataatgagaaatagtcaatatcagaggtggcctttataaggtatgttgaattgctgatcaacaatttcggctgatggatccaagttctaagaggtcttagctgagcaaacctgtcttgtggtgctgacaaatcttgcctatgtctagtcgaatacttaacataatgtatgtgtcttagactgtaagttgagcctgagcttttcagctgttttctgtggataagatagaatgtaagtggcttggtcaattataccaggtcatctttctatgatgggcaatgatgtgtcttctggtgcttataatcaaatttttctggacttatttcatggtttatgtgtttaacattgatagggcttgtagaccaagtgatgctaggccaaccaaacacctattcaaattcagcccttctatattttagtacatattctgtagcttatattcttaactttgtcattgctggtgcaggagctgttttcaacttgctatgcggcgaaacagataacactgtgatgagaaagattgagacctacttccagcacaatgttcctgaggtgtgtaactgcaagatgcatatgccagtatcttgtgctcctaagcattagcttattgtgttctgttcatttgtaggttcgtaattggcaaagcgaggaagattttgaaagagctctgaaggatgccggcttggttgagtaacaccattggaaatatggcatcagatgcgctcttcacttgtgacgaacaggcgcgtgatatttaccagctgaaacagcttctaaagcaaagcaatcgagcttcttgagctcatccttggttattatgtcgagagctgtgaattctgttaaagggactcatccaaacaattttgatgctatgagcttatatgaagcaaaggtgttccttcgctatttcgtgggaacttgttgccaggactagatctacacttgcattatactctgttacttcgtgtacttaactgggaacctgttttggtttttatggctttgtcgtcgagatgcggtcaccggtgtacgttacgcccttgtgaaaaaactggaaacctctttctgggtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0158200, RefSeq:Os03g0158200