Os03g0159000

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Revision as of 12:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0159000| Description = Proteinase inhibitor, propeptide domain containing protein| Version = NM_001055561.2 GI:297600365 GeneID:4331687| Le...")
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Gene Name

Os03g0159000

Description

Proteinase inhibitor, propeptide domain containing protein

Version

NM_001055561.2 GI:297600365 GeneID:4331687

Length

6378 bp

Definition

Oryza sativa Japonica Group Os03g0159000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3137035..3143412

Sequence Coding Region

3137035..3137486,3137800..3137961,3138070..3138167,3138459..3138550,3140468..3140642
,3140698..3140806,3143370..3143412

Expression

GEO Profiles:Os03g0159000

Genome Context

<gbrowseImage1> name=NC_008396:3137035..3143412 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3137035..3143412 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggaatgatggggtttcttggtggacttggatatggtgatttttcaggaatactgggacactttgccctctcttcgaaaaatcttgtcaatgcgacttctctagatatcacagctgacagtgatgagtttgatgctttgcaaggcaggttcaggagttcatgtgttggaaagcctacctgcaaggctgcaactggccataagaatcctcctgcaaaaaatgtatactcatttttcatgaactgcgtagaatggacagttgccatcatcaatccatccttgccagttgccacccagatgccagaaaatgatttggcatctgaagttcatattgtgtacttgggccacaacgatggcctcaatgcttcccttactgcaagtcttcatctccaacttctatcaggagtctttacaaggtcggatgaagcaagagatgctattctgtatagctacagctatggattctctggttttgctgcaatgctcaattcaacgcaagctgccaaattatctgaagcagaagaggtcatatcaatattcaggagtaggatgctcgagatccatacaacaagaagctgggacttcatgggcctcagcctgcatattcagaatgaacaatcagccggaatgcaattgaaatacggagacgatataattgtcggtattcttgatacaggagggctcgaagctaaacaaacggtcattccagccgcgcgccgggcgtacatccccaagcaaaccttcgccttctgccaatccctcctctcctcgcgcctcctcctcccgtccgccgcctcccccacggcgccggcaccggccctgcccgtgcaggcgctactcaccaccgctggcctcctgccgcaccaccccgacctctccctggtcgcgctcaactcgctcctccgcgtcctctcccggcgcgcctcctccccggcccacccgctcctcgcgctccgcctcctcctgctcatgctctcccccgcctctcccctcccgccgcccgaccacctctccttccccttcgcactctccgcagccatctccccgtcccacgggaaccaggcgcacccacagcgcatggagcaggtgtccccgcatacacctgcttcgcaccggaccggaatatag</cdnaseq>

Protein Sequence

<aaseq>MDGMMGFLGGLGYGDFSGILGHFALSSKNLVNATSLDITADSDE FDALQGRFRSSCVGKPTCKAATGHKNPPAKNVYSFFMNCVEWTVAIINPSLPVATQMP ENDLASEVHIVYLGHNDGLNASLTASLHLQLLSGVFTRSDEARDAILYSYSYGFSGFA AMLNSTQAAKLSEAEEVISIFRSRMLEIHTTRSWDFMGLSLHIQNEQSAGMQLKYGDD IIVGILDTGGLEAKQTVIPAARRAYIPKQTFAFCQSLLSSRLLLPSAASPTAPAPALP VQALLTTAGLLPHHPDLSLVALNSLLRVLSRRASSPAHPLLALRLLLLMLSPASPLPP PDHLSFPFALSAAISPSHGNQAHPQRMEQVSPHTPASHRTGI</aaseq>

Gene Sequence

<dnaseqindica>5927..6378#5452..5613#5246..5343#4863..4954#2771..2945#2607..2715#1..43#atggatggaatgatggggtttcttggtggacttggatatggtggtgactagtggtgcccatcaccacccactaatcactactcctactcagtaactgcggccacaggtaagacttatgactgcactaatccccatttctttgctgctagaagaataaaaatccctcctttttcacccctccttgtggtagtagcagtagcagcattcgctttctttctttcttcctttcttttcctggtgatgattaacctttgttgatggagggccaagtggatgtctgaatcacagtgccaggtttgcaatccccaaaaaaagacttttttctccaggggggagaggagaggttgcaatcgccgcaagagtttgtgttctagtggaaatttttcttggacttggccgctgttctggctgggcatgaggatgagagagagagagagagagagacctggaccagtgccaatcttccaagcccaacacccaccaaagccatcaccaactagcaccaccatttgatgagttctgctcctttcctcctcatcccattaggtacaaaacatctgctctttgtccaatttgggggtgtcactgtctccctccatcctcttcttcatgtccagacaattgtcatgcccaggttagcctaatctttgccttagtttatgatcaagaaatgtggctccagatacagcacaatggggcctgcacccactaggccactagaggcagttacagttaggctgttcctacatgtgcatcatatagttacatcttgaattatctactagattaggttggtgatcctgtcactctattagattagtctttggagttctctgactaggggaggtgtccatgtccccttggggctcagcaacacaatgtgaaatgtgaattgcttgttgcattgtataggaacagtttctcgtttgatcgaatgctaaaccacgacattagtgaacaaataagcatgtcggtgtgaccaaacaatatatacttctatttggatcggtgtgggctgtctgcttgagattaatcttaatgcgcccgccaagtgttcgactgattgcctgtgagagtagtggtgctgagctctgtatgtttgtgggtagtgcgctattaggttgcccaattttgatctcaccagtgcttaaataaggctaaattctaggtgattggattgtgtgagctccagctggtgttgcacttcttcttggctgtccattttgtgctagtcctaattatgtcgacaccggctgctaggatgtataaattcggattgtctttggattttgtatgactatttgcaccttgagggtgctgacagattcgtctgtggctggtgtgaaagaagttaattgactagagtgagcatactttggtgtgacatctaggggatattttgtttaggttcgaatgctgcttgcagcaactcacagttggcatatcatcaaaatagtatgatatcattgtcatgctaatttaacagattaacatctcaaaatctattactcatgagagtagccttcacctacaaaatatcaaagaaaagggacatgatagtaaagagctgattctagggaaagttaagatttcacttttctctcagccatcgagttggagtagttaaccatctatatgtcatggaagaatacactcttcggaaattcaacaccttaaaataaaatagaaaaaacaaaacctgagttcttctttgaagcaataaaatcaataactcctattagcacaagtctgtaaggctttgtgtaaagttttgttacgtcaaagaaacggggtccacttgggcttccatagttgtctggtcctagaaagccctaaaggcaaataaagtagtgcttgttaatcttgtcatttggcaattaaaaccctaatttttaactcttagtttctagtctttattatcagcgtactgtgtgctttttgtaagtcctaattgcaacctatcagctacaataggctgatgcatgctcttattcattttactttctatttttttattataaatcttctgtatttgttgatgattgttcttattctgttattacaatagttcattatgtagttgcagtttcagtgtttcagcaaattaatggtttttaccttgccatgaactcccaatatagtcaaacagttctttttacttactttaaaaggtatagttcagattagacttaagtatttgattcaagactttttgaagccagtggtggtggactaaacttaggtacaagtggccaagtgacaaaacaagcacagttaatacatttctgacaagccagtggtggtggactaaacttaggtacaagtatgcctgaactgtccaattgatggaagtctatttttctgaatcgtagcattgacttttagaaacttgtggaaattataaaaaaaaataaatgacattctcatgttcatttgcaattttgtagcttatataggataggattctggcttcactacatgatacagagcttgatcttactagacgcggcataacttgaatttcatgcataaccataatctgcattctctcagtttgttcctatagatgattatcattttgagtgctattgactttttaaggtcagatttttcaggaatactgggacactttgccctctcttcgaaaaatcttgtcaatgcgacttctctagatatcacagctgacagtgatgagtttgatgctttgcaaggcaggttgggaggacagttcaataaatactccacagtttccatcccatgtctgatgaaggttcaggagttcatgtgttggaaagcctacctgcaaggctgcaactggccataagaatcctcctgcaaaaaatgtatactcatttttcatgaactgcgtagaatggacagttgccatcatcaatccatccttgccagttgccacccagatgccagaaaatgatttggcatctgaagtttcataactatacaaaatatgcagaacttaaaattgatagtacaccatgcagtaagcttctacggtgagtctaaaaacatgtactcctgtatcaaaaccattgttctgacaataccgaccagcctcccaaatctcaattggatggaacatcatcaattgacatgaatgcaggcagccactgaacatgaatgcagatccaacccatatggaacccattgtttgctctgttgtatccaatgatgcaaatttacatattataatgcacagaaaaggcaagattgatggtcggtgaagcatggtttttctgtgaagtgaagaaatgtgattgattgaattcatgtcatggggtgttcggtaagcttcatactgtatgtatgtcggatacttcaggttcttctttatatacctgtaatgattctccatatttccttctgtaaactattatctttgcattactgaagtgcagggcacatatctactggatgtgattcaagatatcctgctaaaatcgtaccacacgatcaatcaggtttctgtttgcctccatgttcttgagtgtctataatagcatgtaaaaaggatatttccatcttattaaggccccctaaacagtttattcatcatcagttaaaaagttgcaatgaggttggctctataagcatgctctttaattctgtgcaatgctagatgatatgcctaccacttaattactacgcatgctagatctacacaaccagccacttacaagttacaaccatctgaaatatattagttgattgagtgcaagtggttgaatgcctgtaaagtagggcgtgaaggattataccataccaaaataagcatggtccatacagattaggaactatttttttccctcaaagtatgattgttctgtattttttttagatttgcactgccatgagtgttcacggattaagtaatggttagtgagaatgtaattattggcattagaaactgtacataaaagttgatagtgcatggctactatgttgatattttgttacctttttacttatgctataaatggttgacaaatactagaaaagagttcaggggaacaattactagatattttaggttctattcaagtattatgcatttctcgctgtagtttgctgaaacctcgatgctgatggtaggcataagtttatcttgtcattaaagtatatcttcaaggtctaatgatttgagcacaatgtgttgaagacaccttgtgtatttaattgaactctaaaccttagagtttagccttttagcagctatttaaactgaaaaccatgaggttagcctttacaggatctcaaaagctggtagatgggtgtctttttgccagttatgtctaacagagcactagataagatgattaaaacacgagttcaagaaggttaggcctctactaacaaaccaaaccccttaggtttgttatcttctactgcattgtacagtagctggactctctgtacttaaactctatagatttaatcatcgcatcaggcatctatagactagatcactagatggacaaggctgaggcatgatgcagcccatggaggattgtcagagccatttgttagctttggaaagcttgtcttgcaagcaccctacagcatggcacaagcacgtcccccacagaatcatatgttctgtcctctgtctacctctgtctatatatatatctcttctcccgttgcagtaacttcatcgtgtaaaggcaatggctgtttttctgcttcttctcattgtttcctttctctcatatcatcccattcaatccactcaagaatcacattcgcatgtagatttttcttgcagatgttactactgttttttcatctttttgtgaaatcatgtgtttcatgttatagttatacctgtgctttctattgtctttcaggttcatattgtgtacttgggccacaacgatggcctcaatgcttcccttactgcaagtcttcatctccaacttctatcaggagtctttacaaggtaattgattgtccttttttctactcaaattaaagacaaataacaaaagacacaccaggtatacttgaagttgaatgtgccaaaatagtcatatggagtgcaaaaacttcatcatctcacatgagctattgttgcgcaacactgtatctagattaaaaaaaggctaaagttgaattattaatttagaaaattcaaaccccttagcttagagaatctagatatatttgttcttatttggcgagaaaatgtggctgaagagtgaagcgtcacttgtgagctcaacttttgtaggtcggatgaagcaagagatgctattctgtatagctacagctatggattctctggttttgctgcaatgctcaattcaacgcaagctgccaaattatctggtatgcatttacctttatcccgttgactttgttctcagaatatacctgtatctacctagttaatttccatgaacttaccaaaaactccaatgatcattatatgagcagaagcagaagaggtcatatcaatattcaggagtaggatgctcgagatccatacaacaagaagctgggacttcatgggcctcagcctgcatattcagaatgaacaatcagccggaatgcaattgaaatacggagacgatataattgtcggtattcttgatacaggtaaatttcctgacagtttcatatacctgtaattccagtttcactctcatatatttgttgctctatattcccaaacatgaagtgcatggtgttctagccggaaaaacatgtggtccaaccacatcgcgagaagttcgagctgatcagctgaatggtgatcgatccctctgacctttgtgttcagacaaatgaaatgagcaaacttgagatgaaagataaaatcatgtcttgcatcttggcatgcgatgcgaagatctgaagctagcatttcttttactactcattcatgtactcctactgtgaaaatgcgcaggagggctcgaagctaaacaaacggtcattccagccgcgcgccgggcgtacatccccaagcaaaccttcgccttctgccaatccctcctctcctcgcgcctcctcctcccgtccgccgcctcccccacggcgccggcaccggccctgcccgtgcaggcgctactcaccaccgctggcctcctgccgcaccaccccgacctctccctggtcgcgctcaactcgctcctccgcgtcctctcccggcgcgcctcctccccggcccacccgctcctcgcgctccgcctcctcctgctcatgctctcccccgcctctcccctcccgccgcccgaccacctctccttccccttcgcactctccgcagccatctccccgtcccacgggaaccaggcgcacccacagcgcatggagcaggtgtccccgcatacacctgcttcgcaccggaccggaatatag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0159000, RefSeq:Os03g0159000