Os04g0682000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Labs working on this gene
Please input related labs here. Institute of Genetics, State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University
References
Institute of Genetics, State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University
Structured Information
| Gene Name |
Os04g0682000 |
|---|---|
| Description |
Similar to Autophagy 4a |
| Version |
NM_001060828.1 GI:115461385 GeneID:4337435 |
| Length |
3422 bp |
| Definition |
Oryza sativa Japonica Group Os04g0682000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:35216531..35219952 |
| Sequence Coding Region |
35216815..35217023,35217115..35217185,35217292..35217347,35217776..35217914,35218039..35218424 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:35216531..35219952 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:35216531..35219952 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgagcttgcctgataggggtgtatcatcgtcttcatctgatccgttgtgcgagggtaacattgcaccttgttcttctagctcggaacagaaggaggattgtagcctgaaacaatcgaaaacctcgatcctgtcctgcgttttcaattcacctttcaatatctttgaggcgcaccaggattcgtccgcaaacaagtcgccgaaatcgtcctctggatcctatgattggtcgagggtattgaggaggatcgtgtgctctggctcaatgtggcgttttctgggcacctccaaggttctcacttcaagtgatgtgtggttccttggtaaatgttacaagctttcgtcggaggagtcgtctagtgactcagattccgaaagtgggcatgccacatttcttgaggacttctcgtcaaggatatggatcacttatcgcagaggctttgatgccatctctgattccaagtatactagtgatgtgaactggggctgcatggtcagaagcagccagatgctggttgctcaggcattgattttccaccatcttggcagatcttggagaaggcccttggagaagccatataacccagaatatatagggatcttacacatgtttggtgattctgaagcttgtgctttctcaattcacaatttacttcaagctggaaatagttatggtctggctgctggatcatgggtgggtccatacgccatgtgtcgggcatggcaaacccttgtccgcaccaatagggagcaacatgaagttgttgatgggaatgaaagtttccctatggctctttatgtggtatccggtgatgaagatggtgaaagaggtggagctccagttgtttgtattgatgttgctgctcagctttgctgtgatttcaacaaaggtcaatcaacttggtcaccgattcttttgctggtccctctggttcttggtcttgacaaaattaatccaaggtacattcctttactaaaggagacgttcacatttcctcagagcttggggattttgggtggaaagcctggaacatcaacctacattgctggggtacaggatgacagggcgctctacctagatccccatgaagttcagatggcagttgatattgcagctgataacatagaggcagacacttcttcataccactgcagcactgtacgagatttggccctagacctgatagatccgtcattggctattggtttttactgccgtgataaagatgacttcgatgatttctgttctcgcgccactgagctagtagataaagccaatggagcaccactcttcactgttgtgcagtcggttcaaccgtcaaaacaaatgtacaatcaggacgatgtgttgggcatctcaggggatggcaacatcaatgtcgaggacctcgatgcctcaggtgaaacaggagaggaggaatggcagattctttag</cdnaseq> |
| Protein Sequence |
<aaseq>MTSLPDRGVSSSSSDPLCEGNIAPCSSSSEQKEDCSLKQSKTSI LSCVFNSPFNIFEAHQDSSANKSPKSSSGSYDWSRVLRRIVCSGSMWRFLGTSKVLTS SDVWFLGKCYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDV NWGCMVRSSQMLVAQALIFHHLGRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNL LQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGE RGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQ SLGILGGKPGTSTYIAGVQDDRALYLDPHEVQMAVDIAADNIEADTSSYHCSTVRDLA LDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGAPLFTVVQSVQPSKQMYNQDDV LGISGDGNINVEDLDASGETGEEEWQIL</aaseq> |
| Gene Sequence |
<dnaseqindica>2930..3138#2768..2838#2606..2661#2039..2177#1529..1914#1373..1423#1203..1288#674..1112#cgcgattcgccgtctccatctcgtctcccgcttcctccccgcgtccgccacgccaccccccacctcgccgcctcgccgtggctgctcctcccctcccctcccctccccgccgccggtgctccggccttcgctgccgccgtgctttctctatctatcctcttcccccacgcggacgggggtgcggcgattcgggctctccgccggacacgcgtcgcttcggcctcaactgaagagccacgcttcggtctcgactctcgaacccccaaggtattcctctcccccaagccttccttcgccgcaccgcctgcgtggagtaaaactgcagagatccatctggaattgggctgtgttcttttgttggtgatggactctcttagcttgcttgattgggttgtgttcggagttttgttctagtctgtttcacttttgctgtggctaatctaatccgcatatttctttctctgcaatgaatgaataaatgtaataattggcccatccagtttgttgcgttgcagaagattcgtttgatgcgtgctgaagtacaatcgtgaaaggaaggaactgtgccaacaccacctgattggtactcctgtcgttcttggacaggagattgattttgcttcggtaggagacccaattgcggatggaatatgcacacgtgcgttgttaggtaatgacgagcttgcctgataggggtgtatcatcgtcttcatctgatccgttgtgcgagggtaacattgcaccttgttcttctagctcggaacagaaggaggattgtagcctgaaacaatcgaaaacctcgatcctgtcctgcgttttcaattcacctttcaatatctttgaggcgcaccaggattcgtccgcaaacaagtcgccgaaatcgtcctctggatcctatgattggtcgagggtattgaggaggatcgtgtgctctggctcaatgtggcgttttctgggcacctccaaggttctcacttcaagtgatgtgtggttccttggtaaatgttacaagctttcgtcggaggagtcgtctagtgactcagattccgaaagtgggcatgccacatttcttgaggacttctcgtcaaggatatggatcacttatcgcagaggtaggtttgtttacacgaccatatgcctggtacagcatgttaatgtgtggaaatcagttgtgagttgtttgcactgtctttttgttgcaggctttgatgccatctctgattccaagtatactagtgatgtgaactggggctgcatggtcagaagcagccagatgctggttgctcaggtgcttgtcgactttatttgattgaaataacagcattttttttaccactgcatttgtaaaatgtacttggatggatttttgcaggcattgattttccaccatcttggcagatcttggagaaggcccttggagaaggtgagatacatgactacctgctgatcttaagacaatgaaaattttcttttttcagttgtagtaggtgatgggcctcttttacaatgatcaaatgttcatatgcagccatataacccagaatatatagggatcttacacatgtttggtgattctgaagcttgtgctttctcaattcacaatttacttcaagctggaaatagttatggtctggctgctggatcatgggtgggtccatacgccatgtgtcgggcatggcaaacccttgtccgcaccaatagggagcaacatgaagttgttgatgggaatgaaagtttccctatggctctttatgtggtatccggtgatgaagatggtgaaagaggtggagctccagttgtttgtattgatgttgctgctcagctttgctgtgatttcaacaaaggtcaatcaacttggtcaccgattcttttgctggtccctctggttcttggtcttgacaaaattaatccaaggtaagcagcaagctattaaatctcattctttgtaggcttcatatggtcacccttgaacggttgatgtttctactgatggttgtttctagtattaatcacttcctgccattgcccttactatcaggtacattcctttactaaaggagacgttcacatttcctcagagcttggggattttgggtggaaagcctggaacatcaacctacattgctggggtacaggatgacagggcgctctacctagatccccatgaagttcagatggtaaaactgcattatttacttagcatatatgagcgccaattttatagatgtgtttttctatctgcaatctggtcaataagtaaaactttcatatgtagtaggttgtaatttagaatcttgatttcatcaatgtgataagtaattcatgcctttttaatggtgccctgtcctcccattcacaacaatggcaacacaaaaaaacagcaaagcggtatattagtgttcgcctttgtctattatgcatgcagtcagcgaccgttattatctggctatttttgcagtatccctttttgcttggaatccattttggttagtaaccttgtagaagtagatggattttgtatttatcaatgtaatgactagggagctatttttgtttttcatttttgagctatggtagttacagtggggtgttctctacatctcaggcagttgatattgcagctgataacatagaggcagacacttcttcataccactgcaggtatgttcgcaattgcagttatgatttggtaaatggtacctaatattcgttatccttttaatttttcaataatgaaaaaacttattatctagctgcactttgacagcactgtacgagatttggccctagacctgatagatccgtcattggctattggtttttactgccgtgataaaggtgaactgtgattgtcgaacaaatgtcgcgtcatcattttaagttcactctaatcttggttttcttatttactgtctgcctgcttatgtagatgacttcgatgatttctgttctcgcgccactgagctagtagataaagccaatggagcaccactcttcactgttgtgcagtcggttcaaccgtcaaaacaaatgtacaatcaggacgatgtgttgggcatctcaggggatggcaacatcaatgtcgaggacctcgatgcctcaggtgaaacaggagaggaggaatggcagattctttagtgaaggaacaaaactgacctcatgaggtacagaaaacgttgcgtccaacacgtcggtcgaatgcccttgtttatgtgtgggtgaatagaaatgactcgttgtgttgtctacagaacaagctggcactgtctcgataccccagggggttgggtcttgggagaatcagctttaggtgctaccgatgtaaaaatgtgatcagttcatcgctcattcgttggaaatctccttgtatcatacatgctcttgtggttggctataactcaaaatttattatacgttctgtt</dnaseqindica> |
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