Os03g0161200

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0161200| Description = Similar to Sulfate transporter 3.1 (AST12) (AtST1)| Version = NM_001055577.1 GI:115450882 GeneID:4331703| Length = 5...")
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Gene Name

Os03g0161200

Description

Similar to Sulfate transporter 3.1 (AST12) (AtST1)

Version

NM_001055577.1 GI:115450882 GeneID:4331703

Length

5729 bp

Definition

Oryza sativa Japonica Group Os03g0161200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3249486..3255214

Sequence Coding Region

3249728..3249916,3250029..3250105,3250203..3250288,3250393..3250870,3250942..3251068
,3251173..3251289,3251402..3251515,3253199..3253264,3254287..3254666
,3254766..3255105

Expression

GEO Profiles:Os03g0161200

Genome Context

<gbrowseImage1> name=NC_008396:3249486..3255214 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3249486..3255214 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtagtggaagcgcggcgaacggcggcggaggaggggcgggggcggcgagggtgccgatgccggcggcgaagccgttcctggagacgctgggggggaacatgaaggagacattcctgccggacgacccgttcagggtggtgcggcgggagcgcgggtgcgggcggcgcgcggcggcggcgctccggtacgtgttcccgttcatggagtgggcgccgtcgtacaccctcggcaccctcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatcagctacgccaagctcgccaacctccctcccgtcctcggcctctattcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcgagggacctggcggtggggacggtggcggtggcgtcgctgctgatcgggtcgatgctgagcgaggaggtgtcggcggcggaggacccggcgctgtacctgcacgtcgcgctcaccgccaccttcttcgccggcgtgttccaggcgctgctgggggtcttgaggctggggttcatcgtggacttcctgtcgcacgccaccatcgtcgggttcatgggcggcgccgccaccgtggtgtgcctgcagcagctcaagggcatgttcggcctcgaccacttcaccaccgccaccgacctcgtctccgtcatgagctccgtcttctcccaaacccacctctggcgatgggagagcgtcgtcatgggctgcggcttcctcttcttcctcctcatcacccgcttcttcagcaagaggaggccaaggttcttctgggtatctgcagctgcgccattggcgtctgtcatcatcgggagcctcctggtgtacctcacacatgctgaaaaccatggcattcaagtgattggttacctgaagaagggcctgaacccaccgtctgccacaagcctgaacttctcgtcgccgtacatgatgctggccctgaagaccgggatcatcactggcgtcattgccctcgctgaggggattgccgtaggaaggagctttgcaatgttcaagaattaccacatcgacggaaacaaggagatgatcgcgtttggaacgatgaacattgtgggatcactcacctcttgctacctcaccaccggtccgttctcgaggtcggccgtcaactacaacgccggctgcaagacggcgatgtcgaacgtgatcatgtcggtggcggtgatgatcacgctgctgttcttgacgccgctgttccactacacgccgctggtggtgctgtcggcgatcatcatgtcggcgatgctggggctgatcgactacccggccgccgtccacctgtggcaggtggacaaggtggacttctgcgtctgcctcggcgcctacctcggcgtcgtcttcggcagcgtcgagatcggcctcgtcgtcgccgtcgggatctccatcctccgcgtgctgctgttcgtggcgcggccgaggacgacggtgctcgggaacatccccaacacgatgatctaccggcggatggaccagtacaccgccgcgcagagggtccccggcgtgctcgtgctccgcgtcgactcgcccatctacttcaccaacgccagctacctgcgtgagaggatcgcgcggtggatcgacgacgaggaggaccagtgcaaggagaagggcgagatgggcattcagtacgtcgtcctcgacatgggtgcggtcggaagcatcgacaccagcgggacgagcatgctggatgaactcaggaagaccctggacaggaggggccttcagattgtgttggcgaacccggggagcgagatcatgaagaagttggacagctccaaggtgcttgaggcgatcggccatgagtggatcttccccacggtgggcgaggcggtggcggagtgcgacttcgtgatgcactcgcagaagccgggaatggtcatgggcagtggagcaccccatgagaacctggtctga</cdnaseq>

Protein Sequence

<aaseq>MGSGSAANGGGGGAGAARVPMPAAKPFLETLGGNMKETFLPDDP FRVVRRERGCGRRAAAALRYVFPFMEWAPSYTLGTLKSDLIAGITIASLAIPQGISYA KLANLPPVLGLYSSFVPPLVYAMMGSSRDLAVGTVAVASLLIGSMLSEEVSAAEDPAL YLHVALTATFFAGVFQALLGVLRLGFIVDFLSHATIVGFMGGAATVVCLQQLKGMFGL DHFTTATDLVSVMSSVFSQTHLWRWESVVMGCGFLFFLLITRFFSKRRPRFFWVSAAA PLASVIIGSLLVYLTHAENHGIQVIGYLKKGLNPPSATSLNFSSPYMMLALKTGIITG VIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGTMNIVGSLTSCYLTTGPFSRSAVNYN AGCKTAMSNVIMSVAVMITLLFLTPLFHYTPLVVLSAIIMSAMLGLIDYPAAVHLWQV DKVDFCVCLGAYLGVVFGSVEIGLVVAVGISILRVLLFVARPRTTVLGNIPNTMIYRR MDQYTAAQRVPGVLVLRVDSPIYFTNASYLRERIARWIDDEEDQCKEKGEMGIQYVVL DMGAVGSIDTSGTSMLDELRKTLDRRGLQIVLANPGSEIMKKLDSSKVLEAIGHEWIF PTVGEAVAECDFVMHSQKPGMVMGSGAPHENLV</aaseq>

Gene Sequence

<dnaseqindica>5299..5487#5110..5186#4927..5012#4345..4822#4147..4273#3926..4042#3700..3813#1951..2016#549..928#110..449#aactcactcgctcacacatacaagcgcagttaagattagttaatccaagctctagctcgatcgcgcggtcgccggagctgaggtagacgaaggagtgcgacgagctaagatgggtagtggaagcgcggcgaacggcggcggaggaggggcgggggcggcgagggtgccgatgccggcggcgaagccgttcctggagacgctgggggggaacatgaaggagacattcctgccggacgacccgttcagggtggtgcggcgggagcgcgggtgcgggcggcgcgcggcggcggcgctccggtacgtgttcccgttcatggagtgggcgccgtcgtacaccctcggcaccctcaagtccgacctcatcgccggcatcaccattgccagcctcgccatcccccagggcatcagctacgccaagctcgccaacctccctcccgtcctcggcctctgtacgcgcacacacacatacacatacagtagctagcttagacgccattgatgcgatgatgcatgacgaccaggtgttcgacatgtgttcctggctgcagattcgagcttcgtgccgccgctggtgtacgcgatgatggggagctcgagggacctggcggtggggacggtggcggtggcgtcgctgctgatcgggtcgatgctgagcgaggaggtgtcggcggcggaggacccggcgctgtacctgcacgtcgcgctcaccgccaccttcttcgccggcgtgttccaggcgctgctgggggtcttgaggctggggttcatcgtggacttcctgtcgcacgccaccatcgtcgggttcatgggcggcgccgccaccgtggtgtgcctgcagcagctcaagggcatgttcggcctcgaccacttcaccaccgccaccgacctcgtctccgtcatgagctccgtcttctcccaaacccacctcgtacgtacctacacattaaattatactactcctgtatatatccgagaaacgttgaggagtctttttgactagtttcacaagattttgactagttttacaagatgatgggctagtcgacctgaatttaaaacctcctcctttctaattatttaatataaagtcattttctaatattcacgttttttttaatatctaattcgaatacacatacgtatgtacagtacatgtacttatgcatgtatacggatggatctttgcattagccaagccagtgtcggtgtacatgtgcctaattcctaggtcccaaaatataaaagattttaggggtgtatttgagaagaaggggattgaggagattgagaagatacgcaaaacgaggtgagccattagctcatgattaattgagtattaattattttaaattttaaaaatggattaatatgatttttttaaagcaactttactatagaaaatttttgcaaaaagcgcactgattagtagtttaggaagcgtgcgtgcgaaaaacgaggtgctttttccctcaatgtccttcaaacgaaccctgtctagatagaatattttatgttagtacgataaatctaaacagactctatgtttaaatttgttatagaaagtatcttatcggtttaaaatatgatatattttggaatggagtgaatagtattctagctgcgtcgtgcggccactggcaatctgtctgtccgcaacggggagaggtgacacaggaggacgacgacgagtgtaactgcgacagggacatgaccctgcacctgcaacctcgtctcgatcgatctgtccggtcacctctcctacctaggagtatagtactagactatagtttcttctcgcgatgaaaaccggagagtttttacagctctaatctacgatcaattaagctgattaattagtttttacatgctgatttgatctacgagctgtgtgtgtgtgtgtgtgtgtggtcgtgactgaattggactgactgactgattggttgattgcagtggcgatgggagagcgtcgtcatgggctgcggcttcctcttcttcctcctcatcacccgcttcttcgtaagtccatgcttaacactctcgttcctttccctttacttttgctgttgtaattaactcaagctaattagacatagacgcatactactttttcttttttttttttgaagaaaagaacattaaggtctagatatgcatgcacttttactcgagaataatatagcatattaattagcacatgttacactttcagtctttgatgaagtgtgatctagggatatactacttggtactagcagaaaaaaaaaagtagtgtattagccataagaatcgccggtaaatgcctggtccaatcatcctaaaagcagtacagtagtgtgtatgacgacgacgagagaatccattcatgacgggaaatcacaccacacactaatacccacgattgcgacaactaaaagcttagctttgtgacaccataattaggatagttaatggcgataagattccgttttgcattcgtgcatgtgtggtcgtgtagtaagtaaccccaaagatattatgagttgggacaagtaagccgacggcaacagtagttgagcaattcagcttgattctagagcttgaacatttctgaaacagtagattacaagttaagaaaactaaggtaggttagtcttgtggttgaagtaaaactatggttagtctctcttttgcctagtggttacttacttgtaagatgtaattactgccaaagtcaaaactgacaaagtctgcctgagaggcatgattaagagaaattgtcatgtaatgttttggagtcacatgtctgtatgtaaggacacaaactcgtgaggccaagggaatcgatccattggtcacttttggatagcttgcatatgagcatatctgatgacctaatcctcctgtcccctataaggtttctattgtcatcttctccttggcctgaatattcctagcatgcgtgcaacttctatactgatctctaacttcgtcctaaaatataagggagtttgagtttttatttgtattgtttgaccactcgttttattcaaaaaatttgtgtaaatataaaaaacgaaaagttgtgcttaaagtactttagataataaagtaagtcacaaaaaattaaataataattttaaatttttttgaataagacgagtggtcaaacaatgcaaacaaaaacttaaaatcccttatattatgggacggagggagtactagtactacatccgtgattttcctttgcgtctgaaaatgaaaaaactgtcttgcttgagatgcaatgatggagagcaagttttaggcgtgcaagttgtaattttgcaagttttgtatcatgctgtttttttccagtacatttgactttgcatatactgatgaaaagtgacagataattcagtgtcatgggctgctcacagaatagcccaataattgcaaatggccaaggtccaccaactggtgatatcaactttttttctatagtaaatccgtgagcaaccttggagaaaatagggccctcatctacattcttgagccatgcatatcagctgattatcctagatttactgatttatttcttcgcgccatcatcactaatttgagtactgatttgacatgtgcaagaatgaatacagtccttgtggaatttaagttatgatccaagattccaattttatttctgaatttctaagctaactgatcaatcttccttttcttcagagcaagaggaggccaaggttcttctgggtatctgcagctgcgccattggcgtctgtcatcatcgggagcctcctggtgtacctcacacatgctgaaaaccatggcattcaagtggtaagcacaacaactgatcaaaaaccttcaacaaactgcaaaacataaacacaaacatgcagtataacatggaacagtactaatttacacgagtgtttttacgattttctagattggttacctgaagaagggcctgaacccaccgtctgccacaagcctgaacttctcgtcgccgtacatgatgctggccctgaagaccgggatcatcactggcgtcattgccctcgctgtaagcttgaaaaatcgattgatttctgcagacattaattgcagttctgcattacttgatcagaccggagtgctgatgtatactgtctgtttctacgaatgcaggaggggattgccgtaggaaggagctttgcaatgttcaagaattaccacatcgacggaaacaaggagatgatcgcgtttggaacgatgaacattgtgggatcactcacctcttgctacctcaccaccggtatgcacattcgtggtagccaggattcgaactcgagacctctgggtttctgataccatgtgtgtatgcaggtccgttctcgaggtcggccgtcaactacaacgccggctgcaagacggcgatgtcgaacgtgatcatgtcggtggcggtgatgatcacgctgctgttcttgacgccgctgttccactacacgccgctggtggtgctgtcggcgatcatcatgtcggcgatgctggggctgatcgactacccggccgccgtccacctgtggcaggtggacaaggtggacttctgcgtctgcctcggcgcctacctcggcgtcgtcttcggcagcgtcgagatcggcctcgtcgtcgccgtcgggatctccatcctccgcgtgctgctgttcgtggcgcggccgaggacgacggtgctcgggaacatccccaacacgatgatctaccggcggatggaccagtacaccgccgcgcagagggtccccggcgtgctcgtgctccgcgtcgactcgcccatctacttcaccaacgccagctacctgcgtgagaggtgagcaagatgaacagaattcagcaagcagattcactcacctcgtgtccagcttgaaaaaaatttggatctcttaccatggtcgacttgtgatgctcattcaggatcgcgcggtggatcgacgacgaggaggaccagtgcaaggagaagggcgagatgggcattcagtacgtcgtcctcgacatgggtggtaagttgttcttgcatcttgatggccatgattcatctgaagcattgcaaaactgtagtagcatgaggcctgatcgatctgtctgaatgtgatgcagcggtcggaagcatcgacaccagcgggacgagcatgctggatgaactcaggaagaccctggacaggaggggccttcaggtaattgccatcttcactgcaaatgcatatacaaggcttcagaatcagctttgttcagagtttctgcatcaggaacccaggctgattcagttacctgccatttccttttcagattgtgttggcgaacccggggagcgagatcatgaagaagttggacagctccaaggtgcttgaggcgatcggccatgagtggatcttccccacggtgggcgaggcggtggcggagtgcgacttcgtgatgcactcgcagaagccgggaatggtcatgggcagtggagcaccccatgagaacctggtctgattggagaagaacttactgtagtatggttgagtttgatcaacctgaggttgtcaacaagcaaagccgagataaatataagcatctcgagtattgtagtactaagttgtcaaggaagttcaaaggaaaaaaaatcacctttttttttgcaaggcgaaaatgatgagcctcagagcctgtacagatgcattggagctacttctttgaagtattgactcaagatcataccttttttccaaatatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0161200, RefSeq:Os03g0161200