Os03g0161500

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0161500| Description = Conserved hypothetical protein| Version = NM_001055579.1 GI:115450886 GeneID:4331705| Length = 2627 bp| Definition ...")
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Gene Name

Os03g0161500

Description

Conserved hypothetical protein

Version

NM_001055579.1 GI:115450886 GeneID:4331705

Length

2627 bp

Definition

Oryza sativa Japonica Group Os03g0161500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3293118..3295744

Sequence Coding Region

3293266..3293410,3293515..3293661,3294799..3294926

Expression

GEO Profiles:Os03g0161500

Genome Context

<gbrowseImage1> name=NC_008396:3293118..3295744 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3293118..3295744 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctcgcggcgaggacacgattcgccggcggcggcggcgcggcggtcgtgctgctgctaatcgtcgcgtcgacggtggccaccagggcggccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctgtaatcgggtcgatgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgcgtcatccccaactgttccattgaccgtgcatgttctaacactatagcaccagcacctgcgcctttaccatcacccaaaaatttctccctcccaacagaccgtaactactgcaactggctgttatttagattttccttttaa</cdnaseq>

Protein Sequence

<aaseq>MLAARTRFAGGGGAAVVLLLIVASTVATRAAVADDFFSPLSPLL APVIGSMCKTVACGKGNCTAASGFPGYRCECEPGWKQMHVGDQASFLPCVIPNCSIDR ACSNTIAPAPAPLPSPKNFSLPTDRNYCNWLLFRFSF</aaseq>

Gene Sequence

<dnaseqindica>149..293#398..544#1682..1809#acaactaaccgccatctctctcctcgcttttaaactcccgcgaaacaaccgctcgctcacacacacacacccagagaagcgagacaatctgctgctgctagtggcggacagagtccaagaaggaatccaagaatcgagagaaatcgagatgctcgcggcgaggacacgattcgccggcggcggcggcgcggcggtcgtgctgctgctaatcgtcgcgtcgacggtggccaccagggcggccgtcgccgacgatttcttctcccctctcagcccgctcctcgcccctgtaatcggtaaaggcaccttctcaaaggggatgatttctttttcttcttcttgttacaaatttgatggtttcttgatgatttggttggatggatggatgggacgggagcagggtcgatgtgcaagacggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgcgagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgcgtcatccccaactgtaaggcttccgcagctcgcctctgccctttgctgctctcacaatctcacatgctctggctttctgcggttcttgttgtgtcatcaatgtccagctgaaatacggctgttcctgtgtccgtgcataactgcataccaacctaacttttgatcacaacgaattgatgtaggatgttggcatgtttgtatctgcaatttgggtacggttgttaggcatgatcattagttttctaatgataaattatagtgcgtgaaagggtatgtagcctagtggttgcagtgacctgagtagcaccctaagatcctgagttcaaatctccatataagcgaatttcagcctgttcaataggctaagttcctactttaaagatattgcatatatctagttggatgtagaggccggctaaaaattacccttctaaaaaaaataaaaattacccttctctaaaaaaataaaaaaaattgatagtgcgtttatggccaatttgcactgggagtgtgcgcgtgcactgtagttagtgggttgaagcaatctgcagaacagtaaaattcttaccaatagttggattcagaatgaaatgaacatccgaatgttttttttttcaagtcgtttcagcttgtaagttgtactgacatgccaatttctgaacataaaacaagtggcatctgcggtatgctgcttttgatgcttcaagcaactaaagcagattggcagcaatacggttgtttgtagtcgtgtcctgaatgtgcttttccaagcaaataatgtatttgaagtctagatgcacaaaaactttaatggaccaatcagatgcagatggaatgaattccaatttcttaagtctgtttgccgtcccggcatggcgaaaaaagtctgtttgctgtctcttttactaagacaaccagttaccataatttcaacatgcgtctccatcagacaggaaaaggctagattacttaaaaatgctcacgcctttgtgtcatcttcagagactattttttgaaccagcagcgtcatcttaagagttcctatttgttcctacattagaagacattcaagcgattattaaacatcatgtttactaatgttatgtggcccatatcagcttacatactcaaatgttatttttccttgcaggttccattgaccgtgcatgttctaacactatagcaccagcacctgcgcctttaccatcacccaaaaatttctccctcccaacagaccgtaactactgcaactggctgttatttagattttccttttaaaaagacttcctcagaactttttgataaaaataccatttccatttcatctgtgatctgatcatcaattcaccattgactgtataattgtgtatgcatagcctgtcaattagcttactgcggttcgggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttcagtaaccttctgaacatcaccacaatgccatgttttcagaattgtaagatcaaaggactcaagccacttgtccatgattgtgcaccgtattccctagctaactagtgtcaaaaatgtcattgtttaaggttcaatcggtgcggattgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgcaccaccgggatctgctggcatatctaacaatggtaatgcacctgcatatggtataacttttttttttccagatgtgttctataggacatgttctctatttgcttcatgggattatttagaaaaagtataccatttctattaactttgttcgaactttgcaggggcgatttcacataaaattctacttcccttgctgattttgggctcactgatggtctgtcaggctatatagatagagaatggagcatacgtagtacatttgagctagattgtttctgccacggacaggatagagcagttagcctgttagagatgtacaccttttgggatgtttgaagtgttgtccagtgtccacgttatggttcttttattctgtgtgagatttgatcacattcatgtgaattaaaatggaataaactgtctctgtgaataactgaat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0161500, RefSeq:Os03g0161500