Os05g0442400

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Annotated Information

Function

Please input function information here. In 1500bp upstream of the ATG start codon region，in addition to the basic core promoter acting element,there are some plants resist acting element processes related to abiotic stress , abscisic acid response elements , the light -inducible promoter acting elements , pathogens inducing factor acting elements , as well as root-specific binding sites.

Rice seedling endogenous Os05g0442400 gene expression may be mainly in the roots,with the continuation of the rice germ , the rice husk expression region of rice endogenous Os05g0442400 gene increases from top to bottom , and reach the maximum expression of the area after heading .

Evolution

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Labs working on this gene

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References

Please input cited references here. 宋亚娥,张红梅,李建粤.水稻Os05g0442400基因启动子分析以及由Os05g0442400基因启动子引导GUS报告基因在转基因水稻中的表达.Journal of Shanghai Normal University(Natural Sciences).2013,42(2):186-191.

Structured Information

Gene Name	Os05g0442400
Description	Similar to MybSt1
Version	NM_001062206.1 GI:115464142 GeneID:4338925
Length	1198 bp
Definition	Oryza sativa Japonica Group Os05g0442400, complete gene.
Source	Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome	Chromosome 5
Location	Chromosome 5:21699994..21701191
Sequence Coding Region	21700263..21700449,21700718..21701079
Expression	GEO Profiles:Os05g0442400
Genome Context	<gbrowseImage1> name=NC_008398:21699994..21701191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>
Gene Structure	<gbrowseImage2> name=NC_008398:21699994..21701191 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>
Coding Sequence	<cdnaseq>atggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatga</cdnaseq>
Protein Sequence	<aaseq>MAFYLGSMGGSPSSWGVAEVPVPSSRPWSKAEDKVFESALVAFP EHTHNRWALVASRLPGRSAHEVWEHYQVLVDDVDLIERGMVASPGCWDDDNNSAGHGR GSGGDERRRGVPWTEEEHRLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFI RQANASSRGDSKRKSIHDITAP</aaseq>
Gene Sequence	<dnaseqindica>743..929#113..474#agatccaaggctatctaagcaccggcatttgcatacagccgcctaagcaaagagcacagcaagtatacgcgaatctgagtgtgtgagagagactagtagcacagacgaaggtatggcgttctacctcggcagcatgggtggctcgccatcgtcatggggggtggcggaggtgccggtgccgagcagcaggccgtggagcaaggcggaggacaaggtgttcgagagcgcgctcgtggcgttcccggagcacacgcacaaccggtgggcgctcgtcgcgtcgcggctcccggggcgctcggcgcacgaggtttgggaacactaccaggtgctcgtggacgatgtcgacctcatcgagcgtggcatggttgcgtccccgggctgctgggacgacgacaacaacagcgccggccacggccgtggcagtggtggggatgagcgtcgtcgcggcgtgccctggactgaggaggagcacaggtatgtgtccaatacgtgccatcaaatcccggttctattccatgttatttttcattttttctgttattttcggtgcgctctttgagatcctaggtattattatattgttcttttcacatcggattacttccctggcccacatcacctgtctcaccaacacgcaggccctagatttccctatagcaacagtaccttgcactacacgtctactatatcgagttacggctaatttcctctttctctctttttctattattattatgaataggctatttcttgaagggctagagaaatatgggcgtggcgactggcgcaacatctcgcgctggtcggtgaagacgcggactccgacgcaagtggcgagccatgcgcagaagttcttcatccgacaggccaacgccagcagccgtggcgactccaagcgtaagagcatccacgacatcactgccccatgatgtgtggtccgatcgaggatatgcattatgatccggtccagtctaggtttagttgtatttccatcaattccaactagctttcaaccccatttcaaagaggagagaacgaagggagtttagtcgtcggccctccctgttagttcctctctctgtgttgtgtaaaatatagctaggcaatagctaaaactaagcttggctggaacctgagatcaattgttgtgatactagtttgtgtacttgtcaaataatatttgtatccgtttaatttc</dnaseqindica>
External Link(s)	NCBI Gene:Os05g0442400, RefSeq:Os05g0442400