Os03g0164400

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0164400| Description = FAR1 domain containing protein| Version = NM_001055598.1 GI:115450924 GeneID:4331725| Length = 2412 bp| Definition ...")
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Gene Name

Os03g0164400

Description

FAR1 domain containing protein

Version

NM_001055598.1 GI:115450924 GeneID:4331725

Length

2412 bp

Definition

Oryza sativa Japonica Group Os03g0164400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3449513..3451924

Sequence Coding Region

3449724..3449726,3449813..3450191,3450421..3451922

Expression

GEO Profiles:Os03g0164400

Genome Context

<gbrowseImage1> name=NC_008396:3449513..3451924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3449513..3451924 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agatttgaggatcaggatgagtattgtaagtttatggctatgaaattcagtagtgaggatgaaggttttgctttctataaccagtatgcgaaagagaaaggttttagtgtaaggaaggattatagtaggcgtgatcgttttagtggattgatatttcataagcgcttcacatgctcaagggaaggatttaggaaggaggtgtatatggattattctggcagaactagggaacccagagcactaactcattgtggatgcaatgctcattttgagattaaactcgatgagataaaaggccattggtatgtaacaaggtttgtggcagatcataatcatcctttgtgtaaagctgatgaagtggcatttctccgttcacatcgtagaattactccagcacaacaggcaaaattggtggaattgagagatttaggtttacatcagcaccaagtgatggatgtaatagagagagaccatggtggttttgaaggtgcaggatttgttacaagggatttgtacaatttttttgtgaaaatgaagaagaaacggattgatggtggagatgctgaccgtgttattaagtacatgcaagctcgtcagaaagatgatatggatttctattatgagtatgagaccgacgaagcaggatgcttgaagaggttattttgggcagatccacaatcaagaatagattatgatgcatttggtgatgttgtcgtgtttgacagcacctatcgagtgaacaaatacaatctccctttcattccttttgttggggtgaaccaccatgggtcgactgtgatttttggttgtgctgtagtttccgatgagagggttggtacttatgaatgggtacttaagcagtttttaagttgcatgtgtcagaaacatcccaagtctgttatcacagatggagacaatgcaatgcgtagagctatcttacttgtgtttccaaattctgaccatcggttgtgcacatggcatattgagcagaatatggcacgtaaccttagtccaactatgctttcagattttagggtccttgtgcatgctccacttgaagaagatgagtttgagagaaaatgggttgagttcaaggttaagcataaagtatcagatgagaacaggtggttgaataggatgtataatctaaggaaaaagtgggcagcagcatacactaaagggagggtttttcttggcatgaagagcaatcaaagaagtgaaagtcttaactcaaaactgcataggttgttggacagaaaaatgagccttgtcattttgattgagcactatgaacattgcttgtcacgtatgcgtcatcaagaggcagagttggatgcaaaagcatctcagtcagtaccatttacaagcaatgactctactctaatagagaaggatgcagctcgtgtttttacacctaaaattttcaagaaggttaaggtggagttatacatgggcatgaattgggaggtaatagatactatagaggaggacaattgtgtcaggtatggttcaatttacacttggtcagaccaaatggaacgctatcggctgttgcgttgtttgggtagtgaagcttttttcaaatcatccatgacagaagagagcacggtgaaagtaatgaagatgttagagaatctaatgcttgaagaggatagtagtgaaaattatgaaaattttgacattgagtttggttatgtggttgggcaaagtagccggaatgatattgaaagtggtgacatggtgcttgatccgacacaaattgtccctaaaggagctccgacaaagagaatgaggggtttcttggagaaacgtaagagaagatgtggtttttgccgcatcccagggcacagtattcgatcgtgccctatatacctaaggcaatga</cdnaseq>

Protein Sequence

<aaseq>RFEDQDEYCKFMAMKFSSEDEGFAFYNQYAKEKGFSVRKDYSRR DRFSGLIFHKRFTCSREGFRKEVYMDYSGRTREPRALTHCGCNAHFEIKLDEIKGHWY VTRFVADHNHPLCKADEVAFLRSHRRITPAQQAKLVELRDLGLHQHQVMDVIERDHGG FEGAGFVTRDLYNFFVKMKKKRIDGGDADRVIKYMQARQKDDMDFYYEYETDEAGCLK RLFWADPQSRIDYDAFGDVVVFDSTYRVNKYNLPFIPFVGVNHHGSTVIFGCAVVSDE RVGTYEWVLKQFLSCMCQKHPKSVITDGDNAMRRAILLVFPNSDHRLCTWHIEQNMAR NLSPTMLSDFRVLVHAPLEEDEFERKWVEFKVKHKVSDENRWLNRMYNLRKKWAAAYT KGRVFLGMKSNQRSESLNSKLHRLLDRKMSLVILIEHYEHCLSRMRHQEAELDAKASQ SVPFTSNDSTLIEKDAARVFTPKIFKKVKVELYMGMNWEVIDTIEEDNCVRYGSIYTW SDQMERYRLLRCLGSEAFFKSSMTEESTVKVMKMLENLMLEEDSSENYENFDIEFGYV VGQSSRNDIESGDMVLDPTQIVPKGAPTKRMRGFLEKRKRRCGFCRIPGHSIRSCPIY LRQ</aaseq>

Gene Sequence

<dnaseqindica>2199..2201#1734..2112#3..1504#caagatttgaggatcaggatgagtattgtaagtttatggctatgaaattcagtagtgaggatgaaggttttgctttctataaccagtatgcgaaagagaaaggttttagtgtaaggaaggattatagtaggcgtgatcgttttagtggattgatatttcataagcgcttcacatgctcaagggaaggatttaggaaggaggtgtatatggattattctggcagaactagggaacccagagcactaactcattgtggatgcaatgctcattttgagattaaactcgatgagataaaaggccattggtatgtaacaaggtttgtggcagatcataatcatcctttgtgtaaagctgatgaagtggcatttctccgttcacatcgtagaattactccagcacaacaggcaaaattggtggaattgagagatttaggtttacatcagcaccaagtgatggatgtaatagagagagaccatggtggttttgaaggtgcaggatttgttacaagggatttgtacaatttttttgtgaaaatgaagaagaaacggattgatggtggagatgctgaccgtgttattaagtacatgcaagctcgtcagaaagatgatatggatttctattatgagtatgagaccgacgaagcaggatgcttgaagaggttattttgggcagatccacaatcaagaatagattatgatgcatttggtgatgttgtcgtgtttgacagcacctatcgagtgaacaaatacaatctccctttcattccttttgttggggtgaaccaccatgggtcgactgtgatttttggttgtgctgtagtttccgatgagagggttggtacttatgaatgggtacttaagcagtttttaagttgcatgtgtcagaaacatcccaagtctgttatcacagatggagacaatgcaatgcgtagagctatcttacttgtgtttccaaattctgaccatcggttgtgcacatggcatattgagcagaatatggcacgtaaccttagtccaactatgctttcagattttagggtccttgtgcatgctccacttgaagaagatgagtttgagagaaaatgggttgagttcaaggttaagcataaagtatcagatgagaacaggtggttgaataggatgtataatctaaggaaaaagtgggcagcagcatacactaaagggagggtttttcttggcatgaagagcaatcaaagaagtgaaagtcttaactcaaaactgcataggttgttggacagaaaaatgagccttgtcattttgattgagcactatgaacattgcttgtcacgtatgcgtcatcaagaggcagagttggatgcaaaagcatctcagtcagtaccatttacaagcaatgactctactctaatagagaaggatgcagctcgtgtttttacacctaaaattttcaagaaggttaaggtggagttatacatgggcatgaattgggaggtaatagatactatagaggaggacaattgtgtcaggtatgtattgcaaatgattggcaaggatggtgttgtcattttgaccggcatgtttgaggaagcattgttggttagcatctgctgcccttgtagaaaaatggagtgcgaatacattccatgcaatcatttatttgcagttctgaaattatttaaagttagacaccattccgaccttctgcatagcacgtagatggactatgaaagcaaagaatgcatttccttctgataggtatggttcaatttacacttggtcagaccaaatggaacgctatcggctgttgcgttgtttgggtagtgaagcttttttcaaatcatccatgacagaagagagcacggtgaaagtaatgaagatgttagagaatctaatgcttgaagaggatagtagtgaaaattatgaaaattttgacattgagtttggttatgtggttgggcaaagtagccggaatgatattgaaagtggtgacatggtgcttgatccgacacaaattgtccctaaaggagctccgacaaagagaatgaggggtttcttggagaaacgtaagagaagatgtggtttttgccgcatcccagggcacagtattcgatcgtgccctatatacctaaggcaagttttaccaagtaatctttttttttttgttctgtggtgtactttacaaatatatatgaggttttttttattttttttacaggaaagtgaacgaagatgtgtgattttgctgtcccagagggtggagtacaggatggctgtggtgaacatggatgtttgtatggtccaacatgaagtatattgatgttgtgtgcgtacagtttatattgtttgaacatgttccaaaattgtaatggacctgaagtacttttttatatttgggttggatgattagcatcttaatatgttttgcaattgagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0164400, RefSeq:Os03g0164400