Os03g0165300

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0165300| Description = Similar to Prep (Fragment)| Version = NM_001055602.1 GI:115450932 GeneID:4331729| Length = 3844 bp| Definition = Or...")
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Gene Name

Os03g0165300

Description

Similar to Prep (Fragment)

Version

NM_001055602.1 GI:115450932 GeneID:4331729

Length

3844 bp

Definition

Oryza sativa Japonica Group Os03g0165300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3491707..3495550

Sequence Coding Region

3492086..3492754,3492853..3492913,3492996..3493378,3493473..3494162

Expression

GEO Profiles:Os03g0165300

Genome Context

<gbrowseImage1> name=NC_008396:3491707..3495550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3491707..3495550 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccacattcttctcctcttccaccaatcagagagacctcaccggcggcggcggcgacggaggcgacatgtcgttccagcactacccaccgccgtctaacccttactcggactcgtcggccggcggcctgatcccgctcccggcgagcatcgtgtcgcatagccacattgcgcacggcggcggcgacgagccggcggcgttcagggaagcggcgacggcggacggcggcgagatgggcctgcagacgcagctgctcatggcgcacggcgcggcggcgcggggacaccagggcgggctatcgcttagcctcggcacgcaggtgccggtgtctctctaccagtacaggccggcgggcatggcggccgcctcgctgctcagcccgagccagtcgtcgccgatggcggggaggagcgcgcagaacagcatctacgtgcagaactcgaggtttctcagggcggcgcgcgagctgctcgacgaggttgtcaatgtccgcgacgcgatcaagcggaagggtgacaagaaccagggcaaggattccggcgagtgcaagggcggtgacgccgccggcgacgacaaggccggctcgaacccgcaggagcaggagagcaattcagcccccgagctctcgccgtcggagaggcaggatctccagaacaaggtcaccgcgctcatggccatgctcgatcaggttgatcggaggtacaggcactaccaccaccagatgcagatcgtgatgtcgtcgttcgacgcggtggccggcggcggcgcggcgaggccgtacacggcgctggcgctgcagacgatctcccgccacttccggtcgctgcgggacgcgatcggcgcgcaggcgcaggcggcgcggcggggcctcggcgagcaggacgcgtcggcgcagggcggcggcggcctctcccggctgcgctacatcgaccagcagctgcggcagcagcgcgccatgcagcagttcggcatgatgcagcagccgcagcacgcgtggcgcccccagcgcggcctcccggagtccgccgtctccgtcctccgcgcctggctcttcgagcacttcctccacccgtatccgaaagattccgagaagctgatgcttgcgaggcagacgggattgtccagggggcaggtatcgaactggttcatcaacgcgcgcgtgcggctgtggaagccaatgatcgaggagatgtacaaggaggagttcggcgcggagatggactccaactcgtcgtcggagaacggcggcggcggcggcggcaagggcaaggacgaggcgatctcgtcggaggaccgcgacgagttccagagcccgtcgagcgccgccgcggcgaggcacgccggcgtcgcgggccagctcaacaacccgttcaagtcggaggcgatgggcggcgccgccctggacgtcggcgtcggcgtcgtcggcctgtccagctgcctcggcggcgccatgggcacgtacgccaccggcctcaacctgaaccaccacgtgcaccaccccggcgccggcggcaccagcctactgcacgacgcgctgcaccaccaccaccacggcggcggcggcgacgccaggttcgtctcctacggcgacatggccgacctcggcggcggcggcggctacgacggcggcagcgtgtcgctgacgctgggcctgcagcactgcaacaacgccggccccgtcccggccgagcagcagggcctgctctacggcagcgccggcgacttcgactacatcaacggctccgacgaccggcagcggttcggcccggcgtcgcagctgctgcacgatttcgtcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MATFFSSSTNQRDLTGGGGDGGDMSFQHYPPPSNPYSDSSAGGL IPLPASIVSHSHIAHGGGDEPAAFREAATADGGEMGLQTQLLMAHGAAARGHQGGLSL SLGTQVPVSLYQYRPAGMAAASLLSPSQSSPMAGRSAQNSIYVQNSRFLRAARELLDE VVNVRDAIKRKGDKNQGKDSGECKGGDAAGDDKAGSNPQEQESNSAPELSPSERQDLQ NKVTALMAMLDQVDRRYRHYHHQMQIVMSSFDAVAGGGAARPYTALALQTISRHFRSL RDAIGAQAQAARRGLGEQDASAQGGGGLSRLRYIDQQLRQQRAMQQFGMMQQPQHAWR PQRGLPESAVSVLRAWLFEHFLHPYPKDSEKLMLARQTGLSRGQVSNWFINARVRLWK PMIEEMYKEEFGAEMDSNSSSENGGGGGGKGKDEAISSEDRDEFQSPSSAAAARHAGV AGQLNNPFKSEAMGGAALDVGVGVVGLSSCLGGAMGTYATGLNLNHHVHHPGAGGTSL LHDALHHHHHGGGGDARFVSYGDMADLGGGGGYDGGSVSLTLGLQHCNNAGPVPAEQQ GLLYGSAGDFDYINGSDDRQRFGPASQLLHDFVA</aaseq>

Gene Sequence

<dnaseqindica>2797..3465#2638..2698#2173..2555#1389..2078#agggagatagtgttaggcagcgccttattggtggcagccgtatattattgctcaaggaaagagtgaggagttagaacaactctagtgtagcctacagagtgaaaccaaaagagagaaggaaaaaaaataacaaaaaggagtagatgcagttttagttcttattattctaatcttctctcttgttgcaatttctttttagaatccttgggatcatctctgtccccgttctgggtggtttctgtcatactccaggaactgtcttgttctagctctttgcttggtctgaaagtcgatttctgcacaggtatatagccttatcctatcaggtttaacgttgttctttggttgcatcagtttgtctttgagtttgatctgagaaaaccaaaaggaattatctttttgggcttgattggtgttcatatgaattcttggtattgtcttctgccttcttgcttgttgaactttccgtttcttgttagctcctttgtggttggttggtgtgccaactgaaaagattgcttcttgttacgtagattattgttgagattgttttctgaatttctcaagcagcggtgagtttttgttgaaattgagctgaatttctctgaaaccaactatttctggatgcattcgtttttgtagcttgctgagaaattcagactcctttttttccttttcatgatttcacaagtactggtttgaactgctattttgttcgcattagatgctgaatttatcaaattgcaggtactgcgaaagctttgggaatagtattgcagaaagcgcagcaatctgaagcttactgtccaaggtagacagctgacataagcagtttagcacttgagctatgttggattcacttcctcgtcttcctgacatattccagtttttcctctcttctttcaagaatcggaattacttcagttgtactaggaattctgaacttcgtttgtagttgctgtctgaatttgtggctactgtttactactggactcatcgtcacgtctctgacaaaactcagtacaccatgttgatgcacgagatgtttttgctcctattaaatcttctgtggttttttctctgaaacgtctgactcaagtatgaatgttactagaaagcaacaacctaaaatcagattgcagcaatccagcagtctgaatttactacctgaaatcatctcaaagacgaattggtactactagttttgaatcctcactcgttttttttgttctcttttgcagccagtttgcagctgaagccaaagactgaatctttcatcagggtttgataatatcaaatacccttgtgatgacagagttaatcagtttgtctcgtcatctacgtgatgattcttcttcagtctgtctcttcttctgcttctgaagacgatggccacattcttctcctcttccaccaatcagagagacctcaccggcggcggcggcgacggaggcgacatgtcgttccagcactacccaccgccgtctaacccttactcggactcgtcggccggcggcctgatcccgctcccggcgagcatcgtgtcgcatagccacattgcgcacggcggcggcgacgagccggcggcgttcagggaagcggcgacggcggacggcggcgagatgggcctgcagacgcagctgctcatggcgcacggcgcggcggcgcggggacaccagggcgggctatcgcttagcctcggcacgcaggtgccggtgtctctctaccagtacaggccggcgggcatggcggccgcctcgctgctcagcccgagccagtcgtcgccgatggcggggaggagcgcgcagaacagcatctacgtgcagaactcgaggtttctcagggcggcgcgcgagctgctcgacgaggttgtcaatgtccgcgacgcgatcaagcggaagggtgacaagaaccagggcaaggattccggcgagtgcaagggcggtgacgccgccggcgacgacaaggccggctcgaacccgcaggagcaggagagcaattcagcccccgagctctcgccgtcggagaggcaggatctccagaacaaggtcaccgcgctcatggccatgctcgatcaggtaatgcctcgatctccatgactccatgtcacttccgaacaagaagaacgtgctcgtcaatggaggttttgttgcgttgtggcgcgcgcggcaggttgatcggaggtacaggcactaccaccaccagatgcagatcgtgatgtcgtcgttcgacgcggtggccggcggcggcgcggcgaggccgtacacggcgctggcgctgcagacgatctcccgccacttccggtcgctgcgggacgcgatcggcgcgcaggcgcaggcggcgcggcggggcctcggcgagcaggacgcgtcggcgcagggcggcggcggcctctcccggctgcgctacatcgaccagcagctgcggcagcagcgcgccatgcagcagttcggcatgatgcagcagccgcagcacgcgtggcgcccccagcgcggcctcccggagtccgccgtctccgtcctccgcgcctggctcttcgagcacttcctccacccgtaagaaccacctccgccgtcatccatgtcgatcgatcgatctcaatctaatcctcaccaatggcgccatgaatatccataggtatccgaaagattccgagaagctgatgcttgcgaggcagacgggattgtccagggggcaggtgagattgagctccatgaactcgacgctctcatgcaaagctgatggattcaaatcaagaagagaattccatggttttttttttctttttttacgtaggtatcgaactggttcatcaacgcgcgcgtgcggctgtggaagccaatgatcgaggagatgtacaaggaggagttcggcgcggagatggactccaactcgtcgtcggagaacggcggcggcggcggcggcaagggcaaggacgaggcgatctcgtcggaggaccgcgacgagttccagagcccgtcgagcgccgccgcggcgaggcacgccggcgtcgcgggccagctcaacaacccgttcaagtcggaggcgatgggcggcgccgccctggacgtcggcgtcggcgtcgtcggcctgtccagctgcctcggcggcgccatgggcacgtacgccaccggcctcaacctgaaccaccacgtgcaccaccccggcgccggcggcaccagcctactgcacgacgcgctgcaccaccaccaccacggcggcggcggcgacgccaggttcgtctcctacggcgacatggccgacctcggcggcggcggcggctacgacggcggcagcgtgtcgctgacgctgggcctgcagcactgcaacaacgccggccccgtcccggccgagcagcagggcctgctctacggcagcgccggcgacttcgactacatcaacggctccgacgaccggcagcggttcggcccggcgtcgcagctgctgcacgatttcgtcgcgtgatcaaagcacggcgcgcgatggatgcatcgtctgcggcggcggcggcggcggcggggaataacgcaagacggcgtcagaagcctgggccggccggccggcgccgtcggcgagggtatacaggtatacaagcaatatacacgtacactcgtgtgttgtgttgggggggtaagtaaagtgatcgaagtaggggtgatcaggggtgtaattgtaaaactgtatatgagaagggggtgtagcttgctgtaaagatagattggtatttttgctagcttgcagatttctctactgattgatgcatggatcattcatatatatatatgtggtgatgtgttgggtcagattggaccagatgttcaatggattactgtgaattgcagct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0165300, RefSeq:Os03g0165300