Os03g0165900

From RiceWiki
Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0165900| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001055606.1 GI:115450940 GeneID:4331734| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0165900

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001055606.1 GI:115450940 GeneID:4331734

Length

2843 bp

Definition

Oryza sativa Japonica Group Os03g0165900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3533846..3536688

Sequence Coding Region

3534157..3534777,3535006..3535218,3536487..3536600

Expression

GEO Profiles:Os03g0165900

Genome Context

<gbrowseImage1> name=NC_008396:3533846..3536688 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3533846..3536688 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagctggtcgtcggcgtggcgcggccgtcgagcccctcggcggcggcgcacgtcgcgtacaagatcccggccggcgacgggccgtacgctcgggccaagcactaccagctggtggagaaggatcttgacgcgtccatcgcgtggttctggaaggcgatcaactccggcgacaaggtggacagcgcgctcaaggacatggccgtcgtcatgaagcagcgtggctaccacgccgacgccatcgacgccatcaagtcgctccgccacctctgccccaagcagtctcaggactccctcgacaacatcctcctcgacctctacaaggcgagcgggaggacgaaggaggagatcgagctgctgaagcagaagctgcggaagatctacctgggcgaggcgttccacgggaagacgacgaagcgggcgaggtcgcacgggcggaagatccacgtctccgtgaagcaggagacgtcgcgggtgctgggcaacctcgcgtgggcgtacatgcagcaggggaatttcatggcggcggaggtggtgtaccgcaaggcgcagatggtcgacccggacgccaacaaggcctgcaacctcgcgctctgcctcatcgagcagcgccgccccgccgacgccgaggccgtcctcgccggcgtgctcgccgggaggtaccacgcccgcgacgacgaccacggcgccccgcacaccggcggcaagatcctcgccaaggtggaggagttgatggcccgcatcaccggcgaggtcgacggccggagcaacagcagcggcggcagcagcagcgacgacgacgaccgcgacgtcgaggacgagatggtggagctgctagacgtggtggtccggcagtgggcggcgccgtacaggaggagcaaccggaggctgccggtcttcgaggagatcactccggtctgcagggagcagatggcagcttgctag</cdnaseq>

Protein Sequence

<aaseq>MDQLVVGVARPSSPSAAAHVAYKIPAGDGPYARAKHYQLVEKDL DASIAWFWKAINSGDKVDSALKDMAVVMKQRGYHADAIDAIKSLRHLCPKQSQDSLDN ILLDLYKASGRTKEEIELLKQKLRKIYLGEAFHGKTTKRARSHGRKIHVSVKQETSRV LGNLAWAYMQQGNFMAAEVVYRKAQMVDPDANKACNLALCLIEQRRPADAEAVLAGVL AGRYHARDDDHGAPHTGGKILAKVEELMARITGEVDGRSNSSGGSSSDDDDRDVEDEM VELLDVVVRQWAAPYRRSNRRLPVFEEITPVCREQMAAC</aaseq>

Gene Sequence

<dnaseqindica>1912..2532#1471..1683#89..202#ggccgtcgcgctctcgaagccgtacgctgttcaaagcgaagcgaatcgaataatcgatcatatccattgcctaattcgtagcacgtcgatggatcagctggtcgtcggcgtggcgcggccgtcgagcccctcggcggcggcgcacgtcgcgtacaagatcccggccggcgacgggccgtacgctcgggccaagcactaccaggtatatataagctctgttttctctcgccggcgttcatggctggcgccgccgcgtccatggggaaattatagctctctctatatatgcatttatttatatattagtagatgctttattaggttaggtaattaatcaggatctagttaggaccgagacttggtacaaaggccttaatggttcttgctcgcttatttcttttttcgaacgaattccttaatttgctaacttttttttgagaggaagatctggctaagttgtttatttggttattactgcttaaatttcgatgagaatatgcagaggaaaaaaataaagaacattacacggcgtaagaatacaataattaattttataacgtactccatatatatacatgccatatggtacagtctttactacaatttaccaattaatggatttcgccaggttggctaacctcagcagatctaatattgggggtgttcgtttgtgctagctctgacagctgttatggctgcagccgtagttaaatttttgatagctactactattgttacagctgtgtatagctgcagagtagcggaaacgaacaaccccattgtaatctactcccaactggtacaaaatggtattaaaatatattttagatacatatttcatattctcggtccttttttgaaattaaaggacctatatgtcctctagtcatcaataaaatatttagttttgcacatcgatctatcttcgaacaacaccagccactattttctattattgcatacactttaactcaacgatattttcatacattgaatctacttattaatacttagaaaattagtactatataaggtcaaagctttaaaatattttttccataaatatttctagaaccatgcacatctataatttctatttagtcagtactcactagcaattttagaagataataaagattattatacaagtatattacaacaacatctactagcaattattgtactagagagtatcttaaatctcattcaagtatgagacatcatctagaataaaatattatataattatgttaaatcatcttcctcatattattttcataacatttcaacttccagtatttcatgatatttagcatatattcatctattatttgtgtagtaaaagcataaggtatcacctagtggttctatatgactgaacttccatatacaacggctttgcatgcatgcatgcatgcatggtaacgcacctcggagctagctagctaacgaagttcactttcttttcagctggtggagaaggatcttgacgcgtccatcgcgtggttctggaaggcgatcaactccggcgacaaggtggacagcgcgctcaaggacatggccgtcgtcatgaagcagcgtggctaccacgccgacgccatcgacgccatcaagtcgctccgccacctctgccccaagcagtctcaggactccctcgacaacatcctcctcgacctctacaaggtatcctctcactctcgacctcgccggcatgcagtaatggccgctgcagggcggatccggcacagggatggcggaatctcgagcccccactattagcgtgaagaccatgagaacccccacaaattctccgaattcttttaccatacgtagatgggagagaggattatagctttatctaattgttcagacccctctgttattcagtaaatgacattgttgatgatgcaggcgagcgggaggacgaaggaggagatcgagctgctgaagcagaagctgcggaagatctacctgggcgaggcgttccacgggaagacgacgaagcgggcgaggtcgcacgggcggaagatccacgtctccgtgaagcaggagacgtcgcgggtgctgggcaacctcgcgtgggcgtacatgcagcaggggaatttcatggcggcggaggtggtgtaccgcaaggcgcagatggtcgacccggacgccaacaaggcctgcaacctcgcgctctgcctcatcgagcagcgccgccccgccgacgccgaggccgtcctcgccggcgtgctcgccgggaggtaccacgcccgcgacgacgaccacggcgccccgcacaccggcggcaagatcctcgccaaggtggaggagttgatggcccgcatcaccggcgaggtcgacggccggagcaacagcagcggcggcagcagcagcgacgacgacgaccgcgacgtcgaggacgagatggtggagctgctagacgtggtggtccggcagtgggcggcgccgtacaggaggagcaaccggaggctgccggtcttcgaggagatcactccggtctgcagggagcagatggcagcttgctagaagatggtaattaattaagagtagtagcaaattgttaattaaattagcaggtccatcatctagtgttgggtagatatatagaatttcatgcacctatccgacgtgtcaacggcttcaactttatagggagaactagctgcaggtgcatgaagctaagcatgcatggatgtttttttttcttgtgagtgtgtgtgtgtgaaattaatagtgtgagatagagaagtataatgtgtgtgtgaccagttgcatgttttgtactctggttgtgttgttgtgtacttatgtagagttgataagtgcatggcttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0165900, RefSeq:Os03g0165900