Os03g0166000

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Revision as of 12:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0166000| Description = Alba, DNA/RNA-binding protein family protein| Version = NM_001055607.1 GI:115450942 GeneID:4331735| Length = 3770 bp...")
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Gene Name

Os03g0166000

Description

Alba, DNA/RNA-binding protein family protein

Version

NM_001055607.1 GI:115450942 GeneID:4331735

Length

3770 bp

Definition

Oryza sativa Japonica Group Os03g0166000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:3539932..3543701

Sequence Coding Region

3540194..3540330,3540836..3540916,3541030..3541263,3541342..3541448,3541548..3541622
,3541711..3541799,3541884..3541964,3543452..3543577

Expression

GEO Profiles:Os03g0166000

Genome Context

<gbrowseImage1> name=NC_008396:3539932..3543701 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:3539932..3543701 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcggtaccagcgggtggagaagccgcggcccgaggccgccgtcatcagcgagaacgaaatccgcatcaccacccagggcctcatccgcaactacgtcacctacgccacctccctcctccaggaaaagcgcgtgaaagaaatagtgttgaaggctatgggacaggctatcagcaagacagtggctattgctgagatcataaagaaacggatccctgggttgcatcaagatacatcaattagttcagtcagtattactgatgtatgggaacccattgaggaaggccttgtaccattggagatgactcgtcatgtttcaatgatatcaatttccctgtcaccgaaggagcttaacaagagttcagctgggtatcaagctcccttgcatgcagagccaattaagccacaaagataccaacaaacccagcaatatcaacaacaacagcaccagtctaggccaagccaagttcaaacagattcatatgggcgcggccgtggtagaggcagaggaagaggaaggggttggggtggtaggggaggctatggtggagggtatggtggatatgataacaaccaaggaggttatggtggatatggacaccagggtggatatggacaccaaggggggtatggcaaccagggaggatatggccacaatcaaggtggttatggagggtatggttacaaccaaggtggatatggaggatatgaaaatggtggctggaactacaaccggaacagaggtggtggtggtggcgggggccgtggaagaggcaactggggatatggtggtccaggaggatatgaacgttcaggtccggcatatgaacgtggtggcagaggtggaggtagcccaggcggcagaggctatgcccggggccgtggacgaatgggcggtggccgtgggcgaggcaaccaaaactattag</cdnaseq>

Protein Sequence

<aaseq>MDRYQRVEKPRPEAAVISENEIRITTQGLIRNYVTYATSLLQEK RVKEIVLKAMGQAISKTVAIAEIIKKRIPGLHQDTSISSVSITDVWEPIEEGLVPLEM TRHVSMISISLSPKELNKSSAGYQAPLHAEPIKPQRYQQTQQYQQQQHQSRPSQVQTD SYGRGRGRGRGRGRGWGGRGGYGGGYGGYDNNQGGYGGYGHQGGYGHQGGYGNQGGYG HNQGGYGGYGYNQGGYGGYENGGWNYNRNRGGGGGGGRGRGNWGYGGPGGYERSGPAY ERGGRGGGSPGGRGYARGRGRMGGGRGRGNQNY</aaseq>

Gene Sequence

<dnaseqindica>3372..3508#2786..2866#2439..2672#2254..2360#2080..2154#1903..1991#1738..1818#125..250#tttctagggttttaagcctcacccaaaccgcctcagccgctcccctctccccttcgacaacagcagcgccgccgccgccgcaggagccgcatcgccgggggttcgccggagggagggagtagccatggatcggtaccagcgggtggagaagccgcggcccgaggccgccgtcatcagcgagaacgaaatccgcatcaccacccagggcctcatccgcaactacgtcacctacgccacctccctcctccaggtacagcgagccccctccccccagccgccgctcttcctgcttcgctcccgcgatgcccccctcttgcgggtgccccgcgcctagtagcgggttctccggttagatcttgctgtaccttgtaagaaaaaaaggtagtagtagtaatttttgggatgaggcgaatgcccgttggtgtggtgcactctacggcttggaatatatttggggaagcatgagttaggcgcgtgagtaagacgaggtgtggatttggtgcattgtgtgctgctgctgagttgctgattggaatcttggtgataagggttgtgttgagctcacaaagttcctgcctctgttagtttcgatgtgcaaaaacatgaaagatattaaagatgagttcttttttgttgcgtcaatgcctaaaggaacagcatatggggattatattggtgccgtgcaatgcattgtttttcaacagttaggtagcagggctgtgacctttgtactcacatagcaatgagtgatgagggagctgtttttctgcacggctatagtaggcacatgggatttctcttgctgtggcttgagttaaatttttgagatactcttgttattaatgtgccatgtgccaagtgccaattgacgacaagaactctctgatactaccgtttatgcatgcccgatttaagttgagcgcaatatacaagttttatgtttaatatgcaaactagcgcaacttttaatgcctctttaaagagctggttgttcctataattctgatattgaatatagtggattgtcacacgggtattatccttcaatcacgatttagtgccaaagtttagctctcatcgtaaaaaaaatgatttcctaattcagctcctgcacctgcgctccacaccgatttcaaattatagaagagcaaactaggaaacagttccctgtcctttctttctgcaggcacatcaaactgtatccctgctggccctttgccaccctgtgataagtgtatttgcattttgcccgattggatcctcctcttcaacccccagtctccaagttgactgttttgtttccttctcagccctatgcccatgctagctctattgctgtcaccgaggatctgctgcacgacgagactgatgtttgtggctgacataccttgaccaatgtatctcctgtttttatggactggggggttcacagcatttttattaaaatatgaatgcagaagatgcattcttgtaatccatatttctttttagcagtgtctatattcatcaggtagtccacatgattgttctatttataaccacttaaccagtacaaatctgagctgttatgtaacaactgctggaaatataacccattttgacaacattttgcagtatcactattcacttattttcgtgtgaagtgttatgccatttgtactgaggcatctaccaattgtcaccgtttatgtactctggtatgtgcatgctatgaatcttataacctgtttgtagcaggaaaagcgcgtgaaagaaatagtgttgaaggctatgggacaggctatcagcaagacagtggctattgctgagatcataaaggttagcctattgttatctctcttgctttaggtaccaatatttgaactgttgagcaattaactcacatctaactggcaactgcagaaacggatccctgggttgcatcaagatacatcaattagttcagtcagtattactgatgtatgggaacccattgaggaaggccttgtaccgttaagtttctgagaacaatttcatctgtcagtatattcttggactacactttttctttatgttatttattagtgttatcttgtgcagattggagatgactcgtcatgtttcaatgatatcaatttccctgtcaccgaaggagcttaacaagagttcagctgggtttgtttgatttgctcttatctcctcagtgttcaattcaaataatcacactaccatagttctgaatgaatgtagcaacattttatcgtccttttgaaggtatcaagctcccttgcatgcagagccaattaagccacaaagataccaacaaacccagcaatatcaacaacaacagcaccagtctaggccaagccaagttcaaacaggtgaatatcttttcactaatagaagtattttcgtaccattataagccggattgctaacttgttccttttgtattggagattcatatgggcgcggccgtggtagaggcagaggaagaggaaggggttggggtggtaggggaggctatggtggagggtatggtggatatgataacaaccaaggaggttatggtggatatggacaccagggtggatatggacaccaaggggggtatggcaaccagggaggatatggccacaatcaaggtggttatggagggtatggttacaaccaaggtggatatggaggatatggtaagtaatatgatgatatgctagaaatgtttattatgagataatctctcaatcaggaatttggtgtcctgaaattgtttgcaatcatttatagtaaccatttatcttttcagaaaatggtggctggaactacaaccggaacagaggtggtggtggtggcgggggccgtggaagaggcaactggggatatggtggtatgtactatttaataattgacaccttattttattcatgaccaagtaagctgttctgtgttcatgcctctcatatgtcagaggtactagtgttcttctgaactagctattatgttttacattgttttaatcggaatctgataattatttacatgctggtttactaagaataaagtcttcacaatttacttcttgtaccgtaagttcaaatccaccttcttggctcccatatatttgaacggagtaacaatttttaacacacgctgaacttaaaatagcaacagtgtctgtcatgtaacacaattacatgaaggtacttgaaatgagtggaaaatgatataatatgttgagccttttctaaattatccaggggcatttcatttccaaagttatctgctttaccttcactttagtggtatctgtttttgtttgtaccaaagaataggagacgtttcgtcatcttgcagcggcataaaacatccaattgtggaaactgttatttcaggtccaggaggatatgaacgttcaggtccggcatatgaacgtggtggcagaggtggaggtagcccaggcggcagaggctatgcccggggccgtggacgaatgggcggtggccgtgggcgaggcaaccaaaactattagatcgactttagttggatgtgccagcccggtcgttgggtgctgtatgaagaacaaaaactgtggatgcgttctccataggacggaaccctagctgtttctttgtgatcaatcgactagtcttcccagcttttcgctataatcatcaatggtgtctgccattgcttcgattctgtgggattttgacaagaatgttaagttttaccttggacatattttcctgtatttaagagtgcatttttgaatagcttgtctatcttcctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0166000, RefSeq:Os03g0166000